RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
SDC2-203ENST00000519587 FAM196AQ6ZSG2 479 aa18.45■□□□□ 0.54
SDC2-203ENST00000519587 IL17REQ8NFR9 667 aa18.45■□□□□ 0.54
SDC2-203ENST00000519587 THUMPD2Q9BTF0 503 aaKnown RBP18.44■□□□□ 0.54
SDC2-203ENST00000519587 SLC52A2Q9HAB3 445 aa18.44■□□□□ 0.54
SDC2-203ENST00000519587 LGR6Q9HBX8 967 aa18.44■□□□□ 0.54
SDC2-203ENST00000519587 TMOD3Q9NYL9 352 aa18.44■□□□□ 0.54
SDC2-203ENST00000519587 ZNF521Q96K83 1311 aa18.44■□□□□ 0.54
SDC2-203ENST00000519587 KDM3BQ7LBC6 1761 aa18.43■□□□□ 0.54
SDC2-203ENST00000519587 PAPPAQ13219 1627 aa18.43■□□□□ 0.54
SDC2-203ENST00000519587 GOLGA2Q08379 1002 aa18.43■□□□□ 0.54
SDC2-203ENST00000519587 GNAI1P63096 354 aa18.42■□□□□ 0.54
SDC2-203ENST00000519587 SYTL4Q96C24 671 aaPredicted RBP18.42■□□□□ 0.54
SDC2-203ENST00000519587 IFT57Q9NWB7 429 aa18.42■□□□□ 0.54
SDC2-203ENST00000519587 BTAF1O14981 1849 aa18.42■□□□□ 0.54
SDC2-203ENST00000519587 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
SDC2-203ENST00000519587 MYH16Q9H6N6 1097 aa18.41■□□□□ 0.54
SDC2-203ENST00000519587 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
SDC2-203ENST00000519587 E9PSI1 815 aa18.4■□□□□ 0.54
SDC2-203ENST00000519587 CFAP44Q96MT7 982 aa18.4■□□□□ 0.54
SDC2-203ENST00000519587 YY1P25490 414 aa18.39■□□□□ 0.53
SDC2-203ENST00000519587 PRIM1P49642 420 aaKnown RBP18.39■□□□□ 0.53
SDC2-203ENST00000519587 R3HDM1Q15032 1099 aaKnown RBP18.39■□□□□ 0.53
SDC2-203ENST00000519587 FAM182BQ5T319 152 aa18.39■□□□□ 0.53
SDC2-203ENST00000519587 ACSBG1Q96GR2 724 aa18.39■□□□□ 0.53
SDC2-203ENST00000519587 LAS1LQ9Y4W2 734 aaKnown RBP18.39■□□□□ 0.53
SDC2-203ENST00000519587 UBR2Q8IWV8 1755 aa18.38■□□□□ 0.53
SDC2-203ENST00000519587 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
SDC2-203ENST00000519587 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
SDC2-203ENST00000519587 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
SDC2-203ENST00000519587 TTC5Q8N0Z6 440 aa18.37■□□□□ 0.53
SDC2-203ENST00000519587 TNS1Q9HBL0 1735 aaKnown RBP18.37■□□□□ 0.53
SDC2-203ENST00000519587 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
SDC2-203ENST00000519587 CHL1O00533 1208 aa18.35■□□□□ 0.53
SDC2-203ENST00000519587 ZNF853P0CG23 659 aa18.35■□□□□ 0.53
SDC2-203ENST00000519587 PIGBQ92521 554 aa18.35■□□□□ 0.53
SDC2-203ENST00000519587 SMARCC1Q92922 1105 aaPredicted RBP18.35■□□□□ 0.53
SDC2-203ENST00000519587 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
SDC2-203ENST00000519587 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
SDC2-203ENST00000519587 MBIPQ9NS73 344 aa18.34■□□□□ 0.53
SDC2-203ENST00000519587 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
SDC2-203ENST00000519587 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
SDC2-203ENST00000519587 SLFN5Q08AF3 891 aa18.33■□□□□ 0.52
SDC2-203ENST00000519587 ZNF790Q6PG37 636 aa18.33■□□□□ 0.52
SDC2-203ENST00000519587 KCNQ2O43526 872 aa18.32■□□□□ 0.52
SDC2-203ENST00000519587 TRIM37O94972 964 aa18.32■□□□□ 0.52
SDC2-203ENST00000519587 KCPQ6ZWJ8 1503 aa18.32■□□□□ 0.52
SDC2-203ENST00000519587 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
SDC2-203ENST00000519587 ZNF831Q5JPB2 1677 aa18.31■□□□□ 0.52
SDC2-203ENST00000519587 CICQ96RK0 1608 aaPredicted RBP18.31■□□□□ 0.52
SDC2-203ENST00000519587 TSR2Q969E8 191 aaKnown RBP18.31■□□□□ 0.52
SDC2-203ENST00000519587 LY75O60449 1722 aa18.31■□□□□ 0.52
SDC2-203ENST00000519587 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
SDC2-203ENST00000519587 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
SDC2-203ENST00000519587 CDCA7LQ96GN5 454 aa18.3■□□□□ 0.52
SDC2-203ENST00000519587 FMNL2Q96PY5 1086 aa18.3■□□□□ 0.52
SDC2-203ENST00000519587 MIS18AQ9NYP9 233 aa18.3■□□□□ 0.52
SDC2-203ENST00000519587 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
SDC2-203ENST00000519587 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
SDC2-203ENST00000519587 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
SDC2-203ENST00000519587 ASAP1Q9ULH1 1129 aa18.29■□□□□ 0.52
SDC2-203ENST00000519587 DUSP27Q5VZP5 1158 aa18.28■□□□□ 0.52
SDC2-203ENST00000519587 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
SDC2-203ENST00000519587 CHMP4AQ9BY43 222 aa18.28■□□□□ 0.52
SDC2-203ENST00000519587 C5P01031 1676 aa18.28■□□□□ 0.52
SDC2-203ENST00000519587 EIF4A1P60842 406 aaKnown RBP18.27■□□□□ 0.52
SDC2-203ENST00000519587 HEG1Q9ULI3 1381 aa18.27■□□□□ 0.51
SDC2-203ENST00000519587 PTCD1O75127 700 aaKnown RBP18.26■□□□□ 0.51
SDC2-203ENST00000519587 HOXB7P09629 217 aa18.26■□□□□ 0.51
SDC2-203ENST00000519587 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
SDC2-203ENST00000519587 EZH2Q15910 746 aaKnown RBP18.26■□□□□ 0.51
SDC2-203ENST00000519587 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
SDC2-203ENST00000519587 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
SDC2-203ENST00000519587 TJP1Q07157 1748 aa18.26■□□□□ 0.51
SDC2-203ENST00000519587 KCNQ3O43525 872 aa18.25■□□□□ 0.51
SDC2-203ENST00000519587 CT47B1P0C2W7 299 aaPredicted RBP18.25■□□□□ 0.51
SDC2-203ENST00000519587 PTF1AQ7RTS3 328 aa18.25■□□□□ 0.51
SDC2-203ENST00000519587 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
SDC2-203ENST00000519587 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
SDC2-203ENST00000519587 APBA3O96018 575 aa18.24■□□□□ 0.51
SDC2-203ENST00000519587 SNRPA1P09661 255 aaKnown RBP18.24■□□□□ 0.51
SDC2-203ENST00000519587 EXOSC9Q06265 439 aaKnown RBP18.24■□□□□ 0.51
SDC2-203ENST00000519587 TEX13AQ9BXU3 409 aaPredicted RBP18.24■□□□□ 0.51
SDC2-203ENST00000519587 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
SDC2-203ENST00000519587 SIK1P57059 783 aa18.23■□□□□ 0.51
SDC2-203ENST00000519587 TWISTNBQ3B726 338 aaPredicted RBP18.23■□□□□ 0.51
SDC2-203ENST00000519587 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
SDC2-203ENST00000519587 RREB1Q92766 1687 aa18.22■□□□□ 0.51
SDC2-203ENST00000519587 PLSCR1O15162 318 aa18.22■□□□□ 0.51
SDC2-203ENST00000519587 GIGYF1O75420 1035 aaPredicted RBP18.22■□□□□ 0.51
SDC2-203ENST00000519587 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
SDC2-203ENST00000519587 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
SDC2-203ENST00000519587 SLC27A3Q5K4L6 730 aa18.21■□□□□ 0.51
SDC2-203ENST00000519587 C8orf58Q8NAV2 365 aa18.21■□□□□ 0.51
SDC2-203ENST00000519587 CCNL1Q9UK58 526 aaPredicted RBP18.21■□□□□ 0.51
SDC2-203ENST00000519587 NUP188Q5SRE5 1749 aa18.2■□□□□ 0.5
SDC2-203ENST00000519587 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
SDC2-203ENST00000519587 STARD3NLO95772 234 aa18.2■□□□□ 0.5
SDC2-203ENST00000519587 ATP6V1AP38606 617 aa18.2■□□□□ 0.5
SDC2-203ENST00000519587 KRT24Q2M2I5 525 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms