RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 DDX12PQ92771 950 aa13.43□□□□□ -0.26
MSR1-210ENST00000519060 PPP1R1BQ9UD71 204 aaPredicted RBP13.43□□□□□ -0.26
MSR1-210ENST00000519060 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
MSR1-210ENST00000519060 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
MSR1-210ENST00000519060 ARHGEF25Q86VW2 580 aa13.42□□□□□ -0.26
MSR1-210ENST00000519060 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
MSR1-210ENST00000519060 TOPAZ1Q8N9V7 1692 aa13.42□□□□□ -0.26
MSR1-210ENST00000519060 USP6P35125 1406 aa13.41□□□□□ -0.26
MSR1-210ENST00000519060 FAM205CA6NFA0 338 aa13.41□□□□□ -0.26
MSR1-210ENST00000519060 PHF14O94880 888 aa13.41□□□□□ -0.26
MSR1-210ENST00000519060 FOSBP53539 338 aa13.41□□□□□ -0.26
MSR1-210ENST00000519060 PDGFDQ9GZP0 370 aaPredicted RBP13.41□□□□□ -0.26
MSR1-210ENST00000519060 TTC21BQ7Z4L5 1316 aa13.4□□□□□ -0.26
MSR1-210ENST00000519060 GRXCR2A6NFK2 248 aa13.4□□□□□ -0.26
MSR1-210ENST00000519060 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
MSR1-210ENST00000519060 ZNF454Q8N9F8 522 aa13.4□□□□□ -0.26
MSR1-210ENST00000519060 EVC2Q86UK5 1308 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 OVOS2A0A0G2JMS6 1433 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 OVOS2A0A0J9YW53 1432 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 OVOS2Q6IE36 1432 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
MSR1-210ENST00000519060 CDCA7Q9BWT1 371 aaPredicted RBP13.39□□□□□ -0.27
MSR1-210ENST00000519060 CARD10Q9BWT7 1032 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 PCDHGA10Q9Y5H3 936 aa13.39□□□□□ -0.27
MSR1-210ENST00000519060 EXOC5O00471 708 aa13.38□□□□□ -0.27
MSR1-210ENST00000519060 KCNH5Q8NCM2 988 aa13.38□□□□□ -0.27
MSR1-210ENST00000519060 SIN3AQ96ST3 1273 aa13.38□□□□□ -0.27
MSR1-210ENST00000519060 EPAS1Q99814 870 aa13.38□□□□□ -0.27
MSR1-210ENST00000519060 RREB1Q92766 1687 aa13.37□□□□□ -0.27
MSR1-210ENST00000519060 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
MSR1-210ENST00000519060 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
MSR1-210ENST00000519060 PPP4R3BQ5MIZ7 849 aa13.37□□□□□ -0.27
MSR1-210ENST00000519060 SMYD5Q6GMV2 418 aa13.37□□□□□ -0.27
MSR1-210ENST00000519060 HS3ST6Q96QI5 342 aa13.37□□□□□ -0.27
MSR1-210ENST00000519060 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
MSR1-210ENST00000519060 TXNRD1Q16881 649 aa13.36□□□□□ -0.27
MSR1-210ENST00000519060 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
MSR1-210ENST00000519060 SLIT3O75094 1523 aa13.35□□□□□ -0.27
MSR1-210ENST00000519060 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
MSR1-210ENST00000519060 TYW1BQ6NUM6 668 aa13.35□□□□□ -0.27
MSR1-210ENST00000519060 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
MSR1-210ENST00000519060 ZDHHC16Q969W1 377 aa13.35□□□□□ -0.27
MSR1-210ENST00000519060 PEAK1Q9H792 1746 aa13.35□□□□□ -0.27
MSR1-210ENST00000519060 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
MSR1-210ENST00000519060 BCL9O00512 1426 aa13.34□□□□□ -0.27
MSR1-210ENST00000519060 NEUROD1Q13562 356 aa13.34□□□□□ -0.27
MSR1-210ENST00000519060 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
MSR1-210ENST00000519060 COL18A1P39060 1754 aa13.34□□□□□ -0.27
MSR1-210ENST00000519060 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
MSR1-210ENST00000519060 CPSF1Q10570 1443 aaKnown RBP13.33□□□□□ -0.28
MSR1-210ENST00000519060 OSBPP22059 807 aa13.33□□□□□ -0.28
MSR1-210ENST00000519060 SLC15A2Q16348 729 aa13.33□□□□□ -0.28
MSR1-210ENST00000519060 STK32BQ9NY57 414 aa13.33□□□□□ -0.28
MSR1-210ENST00000519060 POTEMA6NI47 508 aa13.32□□□□□ -0.28
MSR1-210ENST00000519060 POTEGQ6S5H5 508 aa13.32□□□□□ -0.28
MSR1-210ENST00000519060 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
MSR1-210ENST00000519060 ZNF687Q8N1G0 1237 aa13.31□□□□□ -0.28
MSR1-210ENST00000519060 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
MSR1-210ENST00000519060 NLRP2Q9NX02 1062 aa13.31□□□□□ -0.28
MSR1-210ENST00000519060 SBF2Q86WG5 1849 aa13.31□□□□□ -0.28
MSR1-210ENST00000519060 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
MSR1-210ENST00000519060 TULP1O00294 542 aaPredicted RBP13.3□□□□□ -0.28
MSR1-210ENST00000519060 SYT17Q9BSW7 474 aa13.3□□□□□ -0.28
MSR1-210ENST00000519060 PIK3C2AO00443 1686 aa13.3□□□□□ -0.28
MSR1-210ENST00000519060 QRICH2Q9H0J4 1663 aa13.3□□□□□ -0.28
MSR1-210ENST00000519060 ROCK2O75116 1388 aaKnown RBP13.3□□□□□ -0.28
MSR1-210ENST00000519060 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
MSR1-210ENST00000519060 LRRC37A3O60309 1634 aa13.29□□□□□ -0.28
MSR1-210ENST00000519060 NME9Q86XW9 330 aa13.29□□□□□ -0.28
MSR1-210ENST00000519060 ADAM33Q9BZ11 813 aa13.29□□□□□ -0.28
MSR1-210ENST00000519060 FHDC1Q9C0D6 1143 aaPredicted RBP13.29□□□□□ -0.28
MSR1-210ENST00000519060 PRIM1P49642 420 aaKnown RBP13.28□□□□□ -0.28
MSR1-210ENST00000519060 MTFR1LQ9H019 292 aa13.28□□□□□ -0.28
MSR1-210ENST00000519060 SLC12A5Q9H2X9 1139 aa13.28□□□□□ -0.28
MSR1-210ENST00000519060 BCL2L12Q9HB09 334 aa13.28□□□□□ -0.28
MSR1-210ENST00000519060 IL2RBP14784 551 aa13.27□□□□□ -0.29
MSR1-210ENST00000519060 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
MSR1-210ENST00000519060 USP31Q70CQ4 1352 aa13.27□□□□□ -0.29
MSR1-210ENST00000519060 RGPD5Q99666 1765 aa13.27□□□□□ -0.29
MSR1-210ENST00000519060 ANKRD24Q8TF21 1146 aa13.26□□□□□ -0.29
MSR1-210ENST00000519060 LRRC4BQ9NT99 713 aa13.26□□□□□ -0.29
MSR1-210ENST00000519060 NFAT5O94916 1531 aa13.25□□□□□ -0.29
MSR1-210ENST00000519060 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
MSR1-210ENST00000519060 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
MSR1-210ENST00000519060 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
MSR1-210ENST00000519060 CASZ1Q86V15 1759 aa13.25□□□□□ -0.29
MSR1-210ENST00000519060 SBNO2Q9Y2G9 1366 aa13.24□□□□□ -0.29
MSR1-210ENST00000519060 MAP3K7O43318 606 aa13.24□□□□□ -0.29
MSR1-210ENST00000519060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.24□□□□□ -0.29
MSR1-210ENST00000519060 HDGFL2Q7Z4V5 671 aaPredicted RBP13.24□□□□□ -0.29
MSR1-210ENST00000519060 ARXQ96QS3 562 aa13.24□□□□□ -0.29
MSR1-210ENST00000519060 TRPM1Q7Z4N2 1603 aa13.24□□□□□ -0.29
MSR1-210ENST00000519060 ZNF827Q17R98 1081 aa13.23□□□□□ -0.29
MSR1-210ENST00000519060 C6orf132Q5T0Z8 1188 aa13.23□□□□□ -0.29
MSR1-210ENST00000519060 RBM26Q5T8P6 1007 aaKnown RBP13.23□□□□□ -0.29
MSR1-210ENST00000519060 DDX54Q8TDD1 881 aaKnown RBP13.23□□□□□ -0.29
MSR1-210ENST00000519060 CARD11Q9BXL7 1154 aa13.23□□□□□ -0.29
MSR1-210ENST00000519060 TNS2Q63HR2 1409 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms