RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 MRC1P22897 1456 aa23.31■■□□□ 1.32
TRAM1-202ENST00000518678 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
TRAM1-202ENST00000518678 MCM10Q7L590 875 aa23.31■■□□□ 1.32
TRAM1-202ENST00000518678 TRIM35Q9UPQ4 493 aa23.31■■□□□ 1.32
TRAM1-202ENST00000518678 DCTN1Q14203 1278 aa23.3■■□□□ 1.32
TRAM1-202ENST00000518678 SENP3-EIF4A1A0A087X0R7 540 aa23.29■■□□□ 1.32
TRAM1-202ENST00000518678 PROM2Q8N271 834 aa23.29■■□□□ 1.32
TRAM1-202ENST00000518678 NGEFQ8N5V2 710 aa23.29■■□□□ 1.32
TRAM1-202ENST00000518678 BCL11BQ9C0K0 894 aaPredicted RBP23.29■■□□□ 1.32
TRAM1-202ENST00000518678 ANO8Q9HCE9 1232 aaPredicted RBP23.29■■□□□ 1.32
TRAM1-202ENST00000518678 BTAF1O14981 1849 aa23.29■■□□□ 1.32
TRAM1-202ENST00000518678 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
TRAM1-202ENST00000518678 CABP4P57796 275 aa23.28■■□□□ 1.32
TRAM1-202ENST00000518678 CCDC27Q2M243 656 aa23.28■■□□□ 1.32
TRAM1-202ENST00000518678 SYTL4Q96C24 671 aaPredicted RBP23.28■■□□□ 1.32
TRAM1-202ENST00000518678 SLC52A2Q9HAB3 445 aa23.27■■□□□ 1.32
TRAM1-202ENST00000518678 TMOD3Q9NYL9 352 aa23.27■■□□□ 1.32
TRAM1-202ENST00000518678 SIPA1L3O60292 1781 aaPredicted RBP23.27■■□□□ 1.32
TRAM1-202ENST00000518678 TEFQ10587 303 aa23.26■■□□□ 1.31
TRAM1-202ENST00000518678 THUMPD2Q9BTF0 503 aaKnown RBP23.26■■□□□ 1.31
TRAM1-202ENST00000518678 NFATC2IPQ8NCF5 419 aa23.25■■□□□ 1.31
TRAM1-202ENST00000518678 PIGBQ92521 554 aa23.25■■□□□ 1.31
TRAM1-202ENST00000518678 PDGFDQ9GZP0 370 aaPredicted RBP23.24■■□□□ 1.31
TRAM1-202ENST00000518678 CASZ1Q86V15 1759 aa23.23■■□□□ 1.31
TRAM1-202ENST00000518678 PLSCR1O15162 318 aa23.23■■□□□ 1.31
TRAM1-202ENST00000518678 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
TRAM1-202ENST00000518678 SALL2Q9Y467 1007 aaPredicted RBP23.23■■□□□ 1.31
TRAM1-202ENST00000518678 PAPPAQ13219 1627 aa23.2■■□□□ 1.3
TRAM1-202ENST00000518678 TAF7Q15545 349 aaPredicted RBP23.2■■□□□ 1.3
TRAM1-202ENST00000518678 CALD1Q05682 793 aaKnown RBP23.19■■□□□ 1.3
TRAM1-202ENST00000518678 NBPF14Q5TI25 921 aa23.19■■□□□ 1.3
TRAM1-202ENST00000518678 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
TRAM1-202ENST00000518678 TXNRD1Q16881 649 aa23.18■■□□□ 1.3
TRAM1-202ENST00000518678 ZNF521Q96K83 1311 aa23.17■■□□□ 1.3
TRAM1-202ENST00000518678 BTBD11A6QL63 1104 aa23.17■■□□□ 1.3
TRAM1-202ENST00000518678 WDR63Q8IWG1 891 aa23.17■■□□□ 1.3
TRAM1-202ENST00000518678 ATG3Q9NT62 314 aa23.17■■□□□ 1.3
TRAM1-202ENST00000518678 ASAP1Q9ULH1 1129 aa23.17■■□□□ 1.3
TRAM1-202ENST00000518678 SMARCC1Q92922 1105 aaPredicted RBP23.16■■□□□ 1.3
TRAM1-202ENST00000518678 BABAM1Q9NWV8 329 aa23.16■■□□□ 1.3
TRAM1-202ENST00000518678 IL16Q14005 1332 aa23.15■■□□□ 1.3
TRAM1-202ENST00000518678 KDM3BQ7LBC6 1761 aa23.15■■□□□ 1.3
TRAM1-202ENST00000518678 ZNF853P0CG23 659 aa23.14■■□□□ 1.29
TRAM1-202ENST00000518678 SLC39A6Q13433 755 aa23.14■■□□□ 1.29
TRAM1-202ENST00000518678 IFT57Q9NWB7 429 aa23.14■■□□□ 1.29
TRAM1-202ENST00000518678 UBR2Q8IWV8 1755 aa23.14■■□□□ 1.29
TRAM1-202ENST00000518678 PALLDQ8WX93 1383 aa23.14■■□□□ 1.29
TRAM1-202ENST00000518678 LY75O60449 1722 aa23.13■■□□□ 1.29
TRAM1-202ENST00000518678 CHL1O00533 1208 aa23.13■■□□□ 1.29
TRAM1-202ENST00000518678 ZNF790Q6PG37 636 aa23.13■■□□□ 1.29
TRAM1-202ENST00000518678 CFAP44Q96MT7 982 aa23.13■■□□□ 1.29
TRAM1-202ENST00000518678 MIS18AQ9NYP9 233 aa23.13■■□□□ 1.29
TRAM1-202ENST00000518678 GNAI1P63096 354 aa23.12■■□□□ 1.29
TRAM1-202ENST00000518678 TSPYL4Q9UJ04 414 aa23.12■■□□□ 1.29
TRAM1-202ENST00000518678 LAS1LQ9Y4W2 734 aaKnown RBP23.12■■□□□ 1.29
TRAM1-202ENST00000518678 KCPQ6ZWJ8 1503 aa23.12■■□□□ 1.29
TRAM1-202ENST00000518678 TUBGCP6Q96RT7 1819 aa23.11■■□□□ 1.29
TRAM1-202ENST00000518678 KCNQ3O43525 872 aa23.11■■□□□ 1.29
TRAM1-202ENST00000518678 KCNQ4P56696 695 aa23.11■■□□□ 1.29
TRAM1-202ENST00000518678 TTC5Q8N0Z6 440 aa23.11■■□□□ 1.29
TRAM1-202ENST00000518678 LRRC4BQ9NT99 713 aa23.1■■□□□ 1.29
TRAM1-202ENST00000518678 ZBTB7AO95365 584 aa23.08■■□□□ 1.29
TRAM1-202ENST00000518678 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
TRAM1-202ENST00000518678 MBIPQ9NS73 344 aa23.08■■□□□ 1.29
TRAM1-202ENST00000518678 ZNF831Q5JPB2 1677 aa23.08■■□□□ 1.29
TRAM1-202ENST00000518678 ZBED9Q6R2W3 1325 aa23.08■■□□□ 1.28
TRAM1-202ENST00000518678 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
TRAM1-202ENST00000518678 PTCD1O75127 700 aaKnown RBP23.07■■□□□ 1.28
TRAM1-202ENST00000518678 SIK1P57059 783 aa23.07■■□□□ 1.28
TRAM1-202ENST00000518678 ZNF827Q17R98 1081 aa23.07■■□□□ 1.28
TRAM1-202ENST00000518678 ZNF496Q96IT1 587 aaPredicted RBP23.07■■□□□ 1.28
TRAM1-202ENST00000518678 RBM42Q9BTD8 480 aaKnown RBP23.07■■□□□ 1.28
TRAM1-202ENST00000518678 SPINK5Q9NQ38 1064 aaPredicted RBP23.07■■□□□ 1.28
TRAM1-202ENST00000518678 EIF4A1P60842 406 aaKnown RBP23.06■■□□□ 1.28
TRAM1-202ENST00000518678 SLC15A2Q16348 729 aa23.06■■□□□ 1.28
TRAM1-202ENST00000518678 FMNL2Q96PY5 1086 aa23.06■■□□□ 1.28
TRAM1-202ENST00000518678 CICQ96RK0 1608 aaPredicted RBP23.05■■□□□ 1.28
TRAM1-202ENST00000518678 SLC27A3Q5K4L6 730 aa23.05■■□□□ 1.28
TRAM1-202ENST00000518678 SLC4A9Q96Q91 983 aa23.05■■□□□ 1.28
TRAM1-202ENST00000518678 STK32BQ9NY57 414 aa23.05■■□□□ 1.28
TRAM1-202ENST00000518678 HEG1Q9ULI3 1381 aa23.04■■□□□ 1.28
TRAM1-202ENST00000518678 VSIG10Q8N0Z9 540 aa23.04■■□□□ 1.28
TRAM1-202ENST00000518678 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
TRAM1-202ENST00000518678 SPON1Q9HCB6 807 aa23.04■■□□□ 1.28
TRAM1-202ENST00000518678 CCNL1Q9UK58 526 aaPredicted RBP23.04■■□□□ 1.28
TRAM1-202ENST00000518678 ATF5Q9Y2D1 282 aaPredicted RBP23.04■■□□□ 1.28
TRAM1-202ENST00000518678 TJP1Q07157 1748 aa23.03■■□□□ 1.28
TRAM1-202ENST00000518678 E9PSI1 815 aa23.03■■□□□ 1.28
TRAM1-202ENST00000518678 SLFN5Q08AF3 891 aa23.03■■□□□ 1.28
TRAM1-202ENST00000518678 MYH16Q9H6N6 1097 aa23.03■■□□□ 1.28
TRAM1-202ENST00000518678 FANCIQ9NVI1 1328 aa23.03■■□□□ 1.28
TRAM1-202ENST00000518678 ATP6V1AP38606 617 aa23.02■■□□□ 1.28
TRAM1-202ENST00000518678 CDCA7LQ96GN5 454 aa23.01■■□□□ 1.27
TRAM1-202ENST00000518678 SNRPA1P09661 255 aaKnown RBP23■■□□□ 1.27
TRAM1-202ENST00000518678 PTGER2P43116 358 aa23■■□□□ 1.27
TRAM1-202ENST00000518678 ITPK1Q13572 414 aa23■■□□□ 1.27
TRAM1-202ENST00000518678 YTHDC1Q96MU7 727 aaKnown RBP23■■□□□ 1.27
TRAM1-202ENST00000518678 TAF1LQ8IZX4 1826 aa23■■□□□ 1.27
TRAM1-202ENST00000518678 C5P01031 1676 aa23■■□□□ 1.27
TRAM1-202ENST00000518678 TRMT2AQ8IZ69 625 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms