RNA–Protein interactions for RNA: ENST00000518381.5

CTNNA1-208, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-208ENST00000518381 COG3Q96JB2 828 aa9.18□□□□□ -0.94
CTNNA1-208ENST00000518381 SLC12A5Q9H2X9 1139 aa9.18□□□□□ -0.94
CTNNA1-208ENST00000518381 NMRK2Q9NPI5 230 aa9.18□□□□□ -0.94
CTNNA1-208ENST00000518381 CD163L1Q9NR16 1453 aa9.18□□□□□ -0.94
CTNNA1-208ENST00000518381 RGPD5Q99666 1765 aa9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 PCDH11XQ9BZA7 1347 aa9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 PCDH11YQ9BZA8 1340 aa9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 TATP17735 454 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 MPRIPQ6WCQ1 1025 aa9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 ARHGAP27Q6ZUM4 889 aa9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 AMIGO3Q86WK7 504 aa9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 BCS1LQ9Y276 419 aa9.17□□□□□ -0.94
CTNNA1-208ENST00000518381 MMP10P09238 476 aa9.16□□□□□ -0.94
CTNNA1-208ENST00000518381 NBPF6Q5VWK0 638 aa9.16□□□□□ -0.94
CTNNA1-208ENST00000518381 MS4A3Q96HJ5 214 aa9.16□□□□□ -0.94
CTNNA1-208ENST00000518381 NBPF4Q96M43 638 aa9.16□□□□□ -0.94
CTNNA1-208ENST00000518381 PUS7Q96PZ0 661 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-208ENST00000518381 A0A1W2PP64 1363 aa9.15□□□□□ -0.94
CTNNA1-208ENST00000518381 RTL1A6NKG5 1358 aa9.15□□□□□ -0.94
CTNNA1-208ENST00000518381 HTRA3P83110 453 aa9.15□□□□□ -0.94
CTNNA1-208ENST00000518381 SMIM5Q71RC9 77 aa9.15□□□□□ -0.94
CTNNA1-208ENST00000518381 OTUD5Q96G74 571 aa9.15□□□□□ -0.94
CTNNA1-208ENST00000518381 CICQ96RK0 1608 aaPredicted RBP9.15□□□□□ -0.94
CTNNA1-208ENST00000518381 PXDNLA1KZ92 1463 aa9.15□□□□□ -0.95
CTNNA1-208ENST00000518381 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 LY75O60449 1722 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 PLEKHG2Q9H7P9 1386 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 USP54Q70EL1 1684 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 KDM2BQ8NHM5 1336 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 LOC102724428A0A0B4J2F2 783 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 FCHSD2O94868 740 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 SIK1P57059 783 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 C9orf131Q5VYM1 1079 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 ASTLQ6HA08 431 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 USHBP1Q8N6Y0 703 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 TUBGCP6Q96RT7 1819 aa9.14□□□□□ -0.95
CTNNA1-208ENST00000518381 GNPATO15228 680 aa9.13□□□□□ -0.95
CTNNA1-208ENST00000518381 CYP27B1O15528 508 aa9.13□□□□□ -0.95
CTNNA1-208ENST00000518381 NLGN1Q8N2Q7 840 aa9.13□□□□□ -0.95
CTNNA1-208ENST00000518381 SMC1BQ8NDV3 1235 aa9.13□□□□□ -0.95
CTNNA1-208ENST00000518381 PIGBQ92521 554 aa9.13□□□□□ -0.95
CTNNA1-208ENST00000518381 CCDC87Q9NVE4 849 aa9.13□□□□□ -0.95
CTNNA1-208ENST00000518381 MON2Q7Z3U7 1717 aa9.12□□□□□ -0.95
CTNNA1-208ENST00000518381 DOT1LQ8TEK3 1739 aa9.12□□□□□ -0.95
CTNNA1-208ENST00000518381 DPEP1P16444 411 aa9.12□□□□□ -0.95
CTNNA1-208ENST00000518381 FBLN1P23142 703 aa9.12□□□□□ -0.95
CTNNA1-208ENST00000518381 TMF1P82094 1093 aa9.12□□□□□ -0.95
CTNNA1-208ENST00000518381 RRS1Q15050 365 aaKnown RBP9.12□□□□□ -0.95
CTNNA1-208ENST00000518381 C10orf71Q711Q0 1435 aa9.12□□□□□ -0.95
CTNNA1-208ENST00000518381 FAM208AQ9UK61 1670 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-208ENST00000518381 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-208ENST00000518381 HSPA1AP0DMV8 641 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-208ENST00000518381 HSPA1BP0DMV9 641 aaKnown RBP9.11□□□□□ -0.95
CTNNA1-208ENST00000518381 NKX1-1Q15270 411 aaPredicted RBP9.11□□□□□ -0.95
CTNNA1-208ENST00000518381 TRAPPC3LQ5T215 181 aa9.11□□□□□ -0.95
CTNNA1-208ENST00000518381 CARD11Q9BXL7 1154 aa9.11□□□□□ -0.95
CTNNA1-208ENST00000518381 ATP6V1AP38606 617 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 ITPK1Q13572 414 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 TMOD3Q9NYL9 352 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 RNF181Q9P0P0 153 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 PIM2Q9P1W9 311 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 SPG7Q9UQ90 795 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 RTCBQ9Y3I0 505 aaKnown RBP9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 PARP3Q9Y6F1 533 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 C4BP0C0L5 1744 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 INSRP06213 1382 aa9.1□□□□□ -0.95
CTNNA1-208ENST00000518381 LTN1O94822 1766 aa9.09□□□□□ -0.95
CTNNA1-208ENST00000518381 HSP90AB2PQ58FF8 381 aa9.09□□□□□ -0.95
CTNNA1-208ENST00000518381 DALRD3Q5D0E6 543 aaKnown RBP9.09□□□□□ -0.95
CTNNA1-208ENST00000518381 DCAF5Q96JK2 942 aa9.09□□□□□ -0.95
CTNNA1-208ENST00000518381 TSPYL2Q9H2G4 693 aaPredicted RBP9.09□□□□□ -0.95
CTNNA1-208ENST00000518381 ASAP1Q9ULH1 1129 aa9.09□□□□□ -0.95
CTNNA1-208ENST00000518381 C5P01031 1676 aa9.09□□□□□ -0.95
CTNNA1-208ENST00000518381 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 SLC24A1O60721 1099 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 SLC34A2O95436 690 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 KCNA3P22001 575 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 KIF12Q96FN5 646 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 SIN3AQ96ST3 1273 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 KCPQ6ZWJ8 1503 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 FLT4P35916 1363 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 KIF24Q5T7B8 1368 aa9.08□□□□□ -0.96
CTNNA1-208ENST00000518381 ZC3H4Q9UPT8 1303 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 FYB1O15117 783 aa9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 POTEJP0CG39 1038 aa9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 GYS1P13807 737 aa9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 RFC4P35249 363 aa9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 NEUROD1Q13562 356 aa9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 RC3H1Q5TC82 1133 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 ATG3Q9NT62 314 aa9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.07□□□□□ -0.961e-8■■□□□ 12
CTNNA1-208ENST00000518381 WDR90Q96KV7 1748 aa9.07□□□□□ -0.96
CTNNA1-208ENST00000518381 VEGFAP15692 232 aaPredicted RBP9.06□□□□□ -0.96
CTNNA1-208ENST00000518381 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
CTNNA1-208ENST00000518381 GGNBP2Q9H3C7 697 aa9.06□□□□□ -0.96
CTNNA1-208ENST00000518381 TOGARAM1Q9Y4F4 1720 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms