RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 LRP5O75197 1615 aa24.92■■□□□ 1.58
FAM49B-208ENST00000518344 PNPLA7Q6ZV29 1317 aa24.89■■□□□ 1.58
FAM49B-208ENST00000518344 ZNF316A6NFI3 1004 aaPredicted RBP24.89■■□□□ 1.58
FAM49B-208ENST00000518344 MSH5O43196 834 aa24.89■■□□□ 1.58
FAM49B-208ENST00000518344 MTFR1LQ9H019 292 aa24.89■■□□□ 1.58
FAM49B-208ENST00000518344 SLC52A2Q9HAB3 445 aa24.89■■□□□ 1.58
FAM49B-208ENST00000518344 PPP1R1BQ9UD71 204 aaPredicted RBP24.89■■□□□ 1.58
FAM49B-208ENST00000518344 MYBBP1AQ9BQG0 1328 aaKnown RBP24.88■■□□□ 1.57
FAM49B-208ENST00000518344 GNAT3A8MTJ3 354 aa24.88■■□□□ 1.57
FAM49B-208ENST00000518344 ITPK1Q13572 414 aa24.88■■□□□ 1.57
FAM49B-208ENST00000518344 LINC00116Q8NCU8 138 aa24.88■■□□□ 1.57
FAM49B-208ENST00000518344 AK7Q96M32 723 aa24.88■■□□□ 1.57
FAM49B-208ENST00000518344 CASZ1Q86V15 1759 aa24.88■■□□□ 1.57
FAM49B-208ENST00000518344 PTCD1O75127 700 aaKnown RBP24.87■■□□□ 1.57
FAM49B-208ENST00000518344 MAP3K5Q99683 1374 aa24.86■■□□□ 1.57
FAM49B-208ENST00000518344 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
FAM49B-208ENST00000518344 SLC4A9Q96Q91 983 aa24.85■■□□□ 1.57
FAM49B-208ENST00000518344 NEFMP07197 916 aa24.84■■□□□ 1.57
FAM49B-208ENST00000518344 COL23A1Q86Y22 540 aaPredicted RBP24.84■■□□□ 1.57
FAM49B-208ENST00000518344 C5P01031 1676 aa24.83■■□□□ 1.57
FAM49B-208ENST00000518344 PTGER2P43116 358 aa24.83■■□□□ 1.57
FAM49B-208ENST00000518344 SLC16A10Q8TF71 515 aa24.83■■□□□ 1.57
FAM49B-208ENST00000518344 PRKRIP1Q9H875 184 aaPredicted RBP24.83■■□□□ 1.57
FAM49B-208ENST00000518344 TEFQ10587 303 aa24.82■■□□□ 1.56
FAM49B-208ENST00000518344 SLC39A6Q13433 755 aa24.82■■□□□ 1.56
FAM49B-208ENST00000518344 SCN11AQ9UI33 1791 aa24.81■■□□□ 1.56
FAM49B-208ENST00000518344 PHF14O94880 888 aa24.81■■□□□ 1.56
FAM49B-208ENST00000518344 SMIM5Q71RC9 77 aa24.81■■□□□ 1.56
FAM49B-208ENST00000518344 FLAD1Q8NFF5 587 aa24.81■■□□□ 1.56
FAM49B-208ENST00000518344 RTF1Q92541 710 aaKnown RBP24.81■■□□□ 1.56
FAM49B-208ENST00000518344 GNPATO15228 680 aa24.8■■□□□ 1.56
FAM49B-208ENST00000518344 PNNQ9H307 717 aaKnown RBP24.8■■□□□ 1.56
FAM49B-208ENST00000518344 C4BP0C0L5 1744 aa24.79■■□□□ 1.56
FAM49B-208ENST00000518344 AMIGO3Q86WK7 504 aa24.78■■□□□ 1.56
FAM49B-208ENST00000518344 MRC1P22897 1456 aa24.77■■□□□ 1.56
FAM49B-208ENST00000518344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.77■■□□□ 1.56
FAM49B-208ENST00000518344 PLEKHF1Q96S99 279 aa24.77■■□□□ 1.56
FAM49B-208ENST00000518344 POLD1P28340 1107 aa24.76■■□□□ 1.55
FAM49B-208ENST00000518344 MCM10Q7L590 875 aa24.76■■□□□ 1.55
FAM49B-208ENST00000518344 TTC5Q8N0Z6 440 aa24.76■■□□□ 1.55
FAM49B-208ENST00000518344 SGIP1Q9BQI5 828 aa24.76■■□□□ 1.55
FAM49B-208ENST00000518344 TAF1LQ8IZX4 1826 aa24.76■■□□□ 1.55
FAM49B-208ENST00000518344 MAPK8IP3Q9UPT6 1336 aa24.76■■□□□ 1.55
FAM49B-208ENST00000518344 SSFA2P28290 1259 aa24.75■■□□□ 1.55
FAM49B-208ENST00000518344 TUBGCP6Q96RT7 1819 aa24.75■■□□□ 1.55
FAM49B-208ENST00000518344 DCTN1Q14203 1278 aa24.74■■□□□ 1.55
FAM49B-208ENST00000518344 RC3H1Q5TC82 1133 aaKnown RBP24.74■■□□□ 1.55
FAM49B-208ENST00000518344 MSL1Q68DK7 614 aa24.74■■□□□ 1.55
FAM49B-208ENST00000518344 ARXQ96QS3 562 aa24.74■■□□□ 1.55
FAM49B-208ENST00000518344 RTCBQ9Y3I0 505 aaKnown RBP24.74■■□□□ 1.55
FAM49B-208ENST00000518344 ADAMTS7Q9UKP4 1686 aa24.74■■□□□ 1.55
FAM49B-208ENST00000518344 QSER1Q2KHR3 1735 aa24.74■■□□□ 1.55
FAM49B-208ENST00000518344 CEMIPQ8WUJ3 1361 aa24.73■■□□□ 1.55
FAM49B-208ENST00000518344 HTATSF1O43719 755 aaKnown RBP24.73■■□□□ 1.55
FAM49B-208ENST00000518344 DNAJC10Q8IXB1 793 aa24.73■■□□□ 1.55
FAM49B-208ENST00000518344 CNTNAP4Q9C0A0 1308 aa24.72■■□□□ 1.55
FAM49B-208ENST00000518344 BTBD11A6QL63 1104 aa24.72■■□□□ 1.55
FAM49B-208ENST00000518344 WDR43Q15061 677 aaKnown RBP eCLIP24.72■■□□□ 1.55
FAM49B-208ENST00000518344 TRAPPC3LQ5T215 181 aa24.72■■□□□ 1.55
FAM49B-208ENST00000518344 CRKLP46109 303 aaKnown RBP24.71■■□□□ 1.55
FAM49B-208ENST00000518344 NFE2L2Q16236 605 aa24.71■■□□□ 1.55
FAM49B-208ENST00000518344 ZNF790Q6PG37 636 aa24.71■■□□□ 1.55
FAM49B-208ENST00000518344 RPS6KA4O75676 772 aa24.7■■□□□ 1.54
FAM49B-208ENST00000518344 FHDC1Q9C0D6 1143 aaPredicted RBP24.69■■□□□ 1.54
FAM49B-208ENST00000518344 CCDC146Q8IYE0 955 aa24.68■■□□□ 1.54
FAM49B-208ENST00000518344 VSIG10Q8N0Z9 540 aa24.68■■□□□ 1.54
FAM49B-208ENST00000518344 KLHL34Q8N239 644 aa24.68■■□□□ 1.54
FAM49B-208ENST00000518344 ZNF496Q96IT1 587 aaPredicted RBP24.68■■□□□ 1.54
FAM49B-208ENST00000518344 ZNF831Q5JPB2 1677 aa24.68■■□□□ 1.54
FAM49B-208ENST00000518344 KCPQ6ZWJ8 1503 aa24.67■■□□□ 1.54
FAM49B-208ENST00000518344 KCNQ3O43525 872 aa24.67■■□□□ 1.54
FAM49B-208ENST00000518344 ARHGEF1Q92888 912 aaKnown RBP24.67■■□□□ 1.54
FAM49B-208ENST00000518344 VIRMAQ69YN4 1812 aaKnown RBP24.67■■□□□ 1.54
FAM49B-208ENST00000518344 CYP19A1P11511 503 aaPredicted RBP24.66■■□□□ 1.54
FAM49B-208ENST00000518344 INTS5Q6P9B9 1019 aaKnown RBP24.66■■□□□ 1.54
FAM49B-208ENST00000518344 FMNL2Q96PY5 1086 aa24.66■■□□□ 1.54
FAM49B-208ENST00000518344 SYT17Q9BSW7 474 aa24.66■■□□□ 1.54
FAM49B-208ENST00000518344 ADAMTS8Q9UP79 889 aa24.66■■□□□ 1.54
FAM49B-208ENST00000518344 ADRA2BP18089 450 aa24.65■■□□□ 1.54
FAM49B-208ENST00000518344 RFC4P35249 363 aa24.65■■□□□ 1.54
FAM49B-208ENST00000518344 TAF7Q15545 349 aaPredicted RBP24.65■■□□□ 1.54
FAM49B-208ENST00000518344 UBR3Q6ZT12 1888 aa24.65■■□□□ 1.54
FAM49B-208ENST00000518344 CCDC87Q9NVE4 849 aa24.65■■□□□ 1.54
FAM49B-208ENST00000518344 ANP32CO43423 234 aa24.64■■□□□ 1.54
FAM49B-208ENST00000518344 RIPK4P57078 832 aa24.64■■□□□ 1.54
FAM49B-208ENST00000518344 THUMPD2Q9BTF0 503 aaKnown RBP24.63■■□□□ 1.53
FAM49B-208ENST00000518344 MIS18AQ9NYP9 233 aa24.63■■□□□ 1.53
FAM49B-208ENST00000518344 HEG1Q9ULI3 1381 aa24.63■■□□□ 1.53
FAM49B-208ENST00000518344 COL5A3P25940 1745 aaPredicted RBP24.63■■□□□ 1.53
FAM49B-208ENST00000518344 TJP1Q07157 1748 aa24.63■■□□□ 1.53
FAM49B-208ENST00000518344 STARD3NLO95772 234 aa24.62■■□□□ 1.53
FAM49B-208ENST00000518344 RUNDC1Q96C34 613 aa24.62■■□□□ 1.53
FAM49B-208ENST00000518344 TMPOP42166 694 aaKnown RBP24.61■■□□□ 1.53
FAM49B-208ENST00000518344 NEUROD2Q15784 382 aa24.61■■□□□ 1.53
FAM49B-208ENST00000518344 TEX13AQ9BXU3 409 aaPredicted RBP24.61■■□□□ 1.53
FAM49B-208ENST00000518344 RRP7AQ9Y3A4 280 aaKnown RBP24.61■■□□□ 1.53
FAM49B-208ENST00000518344 CANXP27824 592 aaKnown RBP24.6■■□□□ 1.53
FAM49B-208ENST00000518344 ZBTB1Q9Y2K1 713 aa24.6■■□□□ 1.53
FAM49B-208ENST00000518344 SIPA1L3O60292 1781 aaPredicted RBP24.59■■□□□ 1.53
FAM49B-208ENST00000518344 DCAF8L1A6NGE4 600 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms