RNA–Protein interactions for RNA: ENST00000517990.5

PABPC1-204, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-204ENST00000517990 PDGFDQ9GZP0 370 aaPredicted RBP8.91□□□□□ -0.98
PABPC1-204ENST00000517990 QRICH2Q9H0J4 1663 aa8.91□□□□□ -0.98
PABPC1-204ENST00000517990 UTRNP46939 3433 aa8.9□□□□□ -0.98
PABPC1-204ENST00000517990 CPSF1Q10570 1443 aaKnown RBP8.9□□□□□ -0.98
PABPC1-204ENST00000517990 MAP3K5Q99683 1374 aa8.9□□□□□ -0.98
PABPC1-204ENST00000517990 TTC21AQ8NDW8 1320 aa8.9□□□□□ -0.98
PABPC1-204ENST00000517990 ARHGEF25Q86VW2 580 aa8.9□□□□□ -0.98
PABPC1-204ENST00000517990 KAT6BQ8WYB5 2073 aa8.89□□□□□ -0.99
PABPC1-204ENST00000517990 SOX12O15370 315 aa8.89□□□□□ -0.99
PABPC1-204ENST00000517990 HRO43593 1189 aa8.89□□□□□ -0.99
PABPC1-204ENST00000517990 PTF1AQ7RTS3 328 aa8.89□□□□□ -0.99
PABPC1-204ENST00000517990 KLHL34Q8N239 644 aa8.89□□□□□ -0.99
PABPC1-204ENST00000517990 SLC16A10Q8TF71 515 aa8.89□□□□□ -0.99
PABPC1-204ENST00000517990 COL18A1P39060 1754 aa8.89□□□□□ -0.99
PABPC1-204ENST00000517990 TNS2Q63HR2 1409 aa8.88□□□□□ -0.99
PABPC1-204ENST00000517990 ABCC6O95255 1503 aa8.88□□□□□ -0.99
PABPC1-204ENST00000517990 NHSQ6T4R5 1651 aa8.88□□□□□ -0.99
PABPC1-204ENST00000517990 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 ARHGAP33O14559 1287 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 GRIN3BO60391 1043 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 HMGB2P26583 209 aaKnown RBP8.87□□□□□ -0.99
PABPC1-204ENST00000517990 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 SLC27A3Q5K4L6 730 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 ACSBG1Q96GR2 724 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 NLRP2Q9NX02 1062 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
PABPC1-204ENST00000517990 TK2O00142 265 aa8.86□□□□□ -0.99
PABPC1-204ENST00000517990 IL2RBP14784 551 aa8.86□□□□□ -0.99
PABPC1-204ENST00000517990 TRPM1Q7Z4N2 1603 aa8.86□□□□□ -0.99
PABPC1-204ENST00000517990 RGPD5Q99666 1765 aa8.86□□□□□ -0.99
PABPC1-204ENST00000517990 TFCP2L1Q9NZI6 479 aa8.85□□□□□ -0.99
PABPC1-204ENST00000517990 KTN1Q86UP2 1357 aaKnown RBP8.85□□□□□ -0.99
PABPC1-204ENST00000517990 NUDT7P0C024 238 aa8.84□□□□□ -0.99
PABPC1-204ENST00000517990 PDAP1Q13442 181 aaKnown RBP8.84□□□□□ -0.99
PABPC1-204ENST00000517990 MICALL2Q8IY33 904 aa8.84□□□□□ -0.99
PABPC1-204ENST00000517990 LHX6Q9UPM6 363 aa8.84□□□□□ -0.99
PABPC1-204ENST00000517990 BTAF1O14981 1849 aa8.84□□□□□ -0.99
PABPC1-204ENST00000517990 ZNF775Q96BV0 537 aaPredicted RBP8.83□□□□□ -1
PABPC1-204ENST00000517990 PAPPAQ13219 1627 aa8.83□□□□□ -1
PABPC1-204ENST00000517990 QSER1Q2KHR3 1735 aa8.83□□□□□ -1
PABPC1-204ENST00000517990 NFAT5O94916 1531 aa8.82□□□□□ -1
PABPC1-204ENST00000517990 LOC100996750A0A140TA64 210 aa8.82□□□□□ -1
PABPC1-204ENST00000517990 ZNF827Q17R98 1081 aa8.82□□□□□ -1
PABPC1-204ENST00000517990 ANKRD24Q8TF21 1146 aa8.82□□□□□ -1
PABPC1-204ENST00000517990 SYTL4Q96C24 671 aaPredicted RBP8.82□□□□□ -1
PABPC1-204ENST00000517990 KRTAP4-6Q9BYQ5 205 aa8.82□□□□□ -1
PABPC1-204ENST00000517990 ZNF787Q6DD87 383 aa8.81□□□□□ -1
PABPC1-204ENST00000517990 HDGFL2Q7Z4V5 671 aaPredicted RBP8.81□□□□□ -1
PABPC1-204ENST00000517990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.81□□□□□ -1
PABPC1-204ENST00000517990 DDX54Q8TDD1 881 aaKnown RBP8.81□□□□□ -1
PABPC1-204ENST00000517990 ROCK2O75116 1388 aaKnown RBP8.81□□□□□ -1
PABPC1-204ENST00000517990 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
PABPC1-204ENST00000517990 LRRC4BQ9NT99 713 aa8.8□□□□□ -1
PABPC1-204ENST00000517990 USP31Q70CQ4 1352 aa8.8□□□□□ -1
PABPC1-204ENST00000517990 PNPLA7Q6ZV29 1317 aa8.8□□□□□ -1
PABPC1-204ENST00000517990 LTN1O94822 1766 aa8.79□□□□□ -1
PABPC1-204ENST00000517990 FLAD1Q8NFF5 587 aa8.79□□□□□ -1
PABPC1-204ENST00000517990 TMC1Q8TDI8 760 aa8.79□□□□□ -1
PABPC1-204ENST00000517990 FAM208AQ9UK61 1670 aaKnown RBP8.78□□□□□ -1
PABPC1-204ENST00000517990 ANKRD36BQ8N2N9 1353 aa8.78□□□□□ -1
PABPC1-204ENST00000517990 MON2Q7Z3U7 1717 aa8.78□□□□□ -1
PABPC1-204ENST00000517990 CHRM1P11229 460 aaPredicted RBP8.78□□□□□ -1
PABPC1-204ENST00000517990 NLGN2Q8NFZ4 835 aa8.78□□□□□ -1
PABPC1-204ENST00000517990 TERF2IPQ9NYB0 399 aa8.78□□□□□ -1
PABPC1-204ENST00000517990 CCNL1Q9UK58 526 aaPredicted RBP8.78□□□□□ -1
PABPC1-204ENST00000517990 USP54Q70EL1 1684 aa8.78□□□□□ -1
PABPC1-204ENST00000517990 COL24A1Q17RW2 1714 aa8.77□□□□□ -1
PABPC1-204ENST00000517990 SHANK3Q9BYB0 1731 aa8.77□□□□□ -1
PABPC1-204ENST00000517990 USP47Q96K76 1375 aa8.77□□□□□ -1.01
PABPC1-204ENST00000517990 HSPA6P17066 643 aa8.77□□□□□ -1.01
PABPC1-204ENST00000517990 PRIM1P49642 420 aaKnown RBP8.77□□□□□ -1.01
PABPC1-204ENST00000517990 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
PABPC1-204ENST00000517990 IP6K1Q92551 441 aa8.77□□□□□ -1.01
PABPC1-204ENST00000517990 CD2APQ9Y5K6 639 aa8.77□□□□□ -1.01
PABPC1-204ENST00000517990 ATP10DQ9P241 1426 aa8.77□□□□□ -1.01
PABPC1-204ENST00000517990 GOLGB1Q14789 3259 aaKnown RBP8.77□□□□□ -1.01
PABPC1-204ENST00000517990 GFRA3O60609 400 aa8.76□□□□□ -1.01
PABPC1-204ENST00000517990 YBX3P16989 372 aaKnown RBP eCLIP8.76□□□□□ -1.01
PABPC1-204ENST00000517990 NME9Q86XW9 330 aa8.76□□□□□ -1.01
PABPC1-204ENST00000517990 ZCRB1Q8TBF4 217 aaKnown RBP8.76□□□□□ -1.01
PABPC1-204ENST00000517990 L3MBTL2Q969R5 705 aa8.76□□□□□ -1.01
PABPC1-204ENST00000517990 LTV1Q96GA3 475 aaPredicted RBP8.76□□□□□ -1.01
PABPC1-204ENST00000517990 EDC4Q6P2E9 1401 aaKnown RBP8.76□□□□□ -1.01
PABPC1-204ENST00000517990 CGNL1Q0VF96 1302 aa8.76□□□□□ -1.01
PABPC1-204ENST00000517990 AMPHP49418 695 aa8.75□□□□□ -1.01
PABPC1-204ENST00000517990 GSE1Q14687 1217 aa8.75□□□□□ -1.01
PABPC1-204ENST00000517990 SBNO2Q9Y2G9 1366 aa8.74□□□□□ -1.01
PABPC1-204ENST00000517990 LY75O60449 1722 aa8.74□□□□□ -1.01
PABPC1-204ENST00000517990 KCNQ4P56696 695 aa8.74□□□□□ -1.01
PABPC1-204ENST00000517990 COL23A1Q86Y22 540 aaPredicted RBP8.74□□□□□ -1.01
PABPC1-204ENST00000517990 COG3Q96JB2 828 aa8.74□□□□□ -1.01
PABPC1-204ENST00000517990 TUBGCP6Q96RT7 1819 aa8.74□□□□□ -1.01
PABPC1-204ENST00000517990 DOT1LQ8TEK3 1739 aa8.74□□□□□ -1.01
PABPC1-204ENST00000517990 SMG6Q86US8 1419 aaKnown RBP8.73□□□□□ -1.01
PABPC1-204ENST00000517990 NSD3Q9BZ95 1437 aa8.73□□□□□ -1.01
PABPC1-204ENST00000517990 SLC24A1O60721 1099 aa8.73□□□□□ -1.01
PABPC1-204ENST00000517990 MSL1Q68DK7 614 aa8.73□□□□□ -1.01
PABPC1-204ENST00000517990 ZNF526Q8TF50 670 aaPredicted RBP8.73□□□□□ -1.01
PABPC1-204ENST00000517990 RAPGEF4Q8WZA2 1011 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms