RNA–Protein interactions for RNA: ENST00000517647.1

TRIM55-205, Transcript of tripartite motif containing 55, humanhuman

TSL 2

Gene TRIM55, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-205ENST00000517647 MPRIPQ6WCQ1 1025 aa14.75□□□□□ -0.05
TRIM55-205ENST00000517647 TMOD3Q9NYL9 352 aa14.75□□□□□ -0.05
TRIM55-205ENST00000517647 CCNL1Q9UK58 526 aaPredicted RBP14.74□□□□□ -0.05
TRIM55-205ENST00000517647 FCHSD2O94868 740 aa14.73□□□□□ -0.05
TRIM55-205ENST00000517647 SLC16A10Q8TF71 515 aa14.73□□□□□ -0.05
TRIM55-205ENST00000517647 MRC1P22897 1456 aa14.73□□□□□ -0.05
TRIM55-205ENST00000517647 HMOX1P09601 288 aa14.72□□□□□ -0.05
TRIM55-205ENST00000517647 GAS2L2Q8NHY3 880 aa14.72□□□□□ -0.05
TRIM55-205ENST00000517647 RSPH6AQ9H0K4 717 aa14.72□□□□□ -0.05
TRIM55-205ENST00000517647 SPON1Q9HCB6 807 aa14.72□□□□□ -0.05
TRIM55-205ENST00000517647 SCN11AQ9UI33 1791 aa14.72□□□□□ -0.05
TRIM55-205ENST00000517647 LOC102724428A0A0B4J2F2 783 aa14.71□□□□□ -0.05
TRIM55-205ENST00000517647 SIK1P57059 783 aa14.71□□□□□ -0.05
TRIM55-205ENST00000517647 DDX10Q13206 875 aaKnown RBP14.71□□□□□ -0.05
TRIM55-205ENST00000517647 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
TRIM55-205ENST00000517647 MTHFSDQ2M296 383 aaKnown RBP14.71□□□□□ -0.05
TRIM55-205ENST00000517647 ATG3Q9NT62 314 aa14.71□□□□□ -0.05
TRIM55-205ENST00000517647 TAF1LQ8IZX4 1826 aa14.71□□□□□ -0.06
TRIM55-205ENST00000517647 U2SURPO15042 1029 aaKnown RBP14.7□□□□□ -0.06
TRIM55-205ENST00000517647 SAMD1Q6SPF0 538 aaPredicted RBP14.7□□□□□ -0.06
TRIM55-205ENST00000517647 ASAP1Q9ULH1 1129 aa14.7□□□□□ -0.06
TRIM55-205ENST00000517647 CICQ96RK0 1608 aaPredicted RBP14.7□□□□□ -0.06
TRIM55-205ENST00000517647 COL24A1Q17RW2 1714 aa14.69□□□□□ -0.06
TRIM55-205ENST00000517647 RNMTO43148 476 aaKnown RBP14.69□□□□□ -0.06
TRIM55-205ENST00000517647 CABP4P57796 275 aa14.69□□□□□ -0.06
TRIM55-205ENST00000517647 FLAD1Q8NFF5 587 aa14.69□□□□□ -0.06
TRIM55-205ENST00000517647 MTFR1LQ9H019 292 aa14.69□□□□□ -0.06
TRIM55-205ENST00000517647 SLC52A2Q9HAB3 445 aa14.69□□□□□ -0.06
TRIM55-205ENST00000517647 C5P01031 1676 aa14.68□□□□□ -0.06
TRIM55-205ENST00000517647 SGIP1Q9BQI5 828 aa14.68□□□□□ -0.06
TRIM55-205ENST00000517647 CEMIPQ8WUJ3 1361 aa14.68□□□□□ -0.06
TRIM55-205ENST00000517647 PNPLA7Q6ZV29 1317 aa14.67□□□□□ -0.06
TRIM55-205ENST00000517647 MYBBP1AQ9BQG0 1328 aaKnown RBP14.67□□□□□ -0.06
TRIM55-205ENST00000517647 HTATSF1O43719 755 aaKnown RBP14.67□□□□□ -0.06
TRIM55-205ENST00000517647 RC3H1Q5TC82 1133 aaKnown RBP14.67□□□□□ -0.06
TRIM55-205ENST00000517647 MAP3K5Q99683 1374 aa14.67□□□□□ -0.06
TRIM55-205ENST00000517647 GNAT3A8MTJ3 354 aa14.66□□□□□ -0.06
TRIM55-205ENST00000517647 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
TRIM55-205ENST00000517647 PRKAR2BP31323 418 aa14.66□□□□□ -0.06
TRIM55-205ENST00000517647 PTGER2P43116 358 aa14.66□□□□□ -0.06
TRIM55-205ENST00000517647 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.06
TRIM55-205ENST00000517647 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
TRIM55-205ENST00000517647 NFATC2IPQ8NCF5 419 aa14.66□□□□□ -0.06
TRIM55-205ENST00000517647 PDGFDQ9GZP0 370 aaPredicted RBP14.66□□□□□ -0.06
TRIM55-205ENST00000517647 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
TRIM55-205ENST00000517647 C4BP0C0L5 1744 aa14.66□□□□□ -0.06
TRIM55-205ENST00000517647 TUBGCP6Q96RT7 1819 aa14.65□□□□□ -0.06
TRIM55-205ENST00000517647 PHACTR3Q96KR7 559 aa14.65□□□□□ -0.06
TRIM55-205ENST00000517647 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
TRIM55-205ENST00000517647 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
TRIM55-205ENST00000517647 SSFA2P28290 1259 aa14.64□□□□□ -0.07
TRIM55-205ENST00000517647 KCNQ4P56696 695 aa14.64□□□□□ -0.07
TRIM55-205ENST00000517647 IL17REQ8NFR9 667 aa14.64□□□□□ -0.07
TRIM55-205ENST00000517647 SLC4A9Q96Q91 983 aa14.64□□□□□ -0.07
TRIM55-205ENST00000517647 PLEKHF1Q96S99 279 aa14.64□□□□□ -0.07
TRIM55-205ENST00000517647 PRKRIP1Q9H875 184 aaPredicted RBP14.64□□□□□ -0.07
TRIM55-205ENST00000517647 CNTNAP4Q9C0A0 1308 aa14.64□□□□□ -0.07
TRIM55-205ENST00000517647 ATP6V1AP38606 617 aa14.63□□□□□ -0.07
TRIM55-205ENST00000517647 ITPK1Q13572 414 aa14.63□□□□□ -0.07
TRIM55-205ENST00000517647 VSIG10Q8N0Z9 540 aa14.63□□□□□ -0.07
TRIM55-205ENST00000517647 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
TRIM55-205ENST00000517647 VIRMAQ69YN4 1812 aaKnown RBP14.63□□□□□ -0.07
TRIM55-205ENST00000517647 UBR3Q6ZT12 1888 aa14.63□□□□□ -0.07
TRIM55-205ENST00000517647 MIER1Q8N108 512 aa14.62□□□□□ -0.07
TRIM55-205ENST00000517647 LINC00116Q8NCU8 138 aa14.62□□□□□ -0.07
TRIM55-205ENST00000517647 COL5A3P25940 1745 aaPredicted RBP14.61□□□□□ -0.07
TRIM55-205ENST00000517647 SIPA1L3O60292 1781 aaPredicted RBP14.61□□□□□ -0.07
TRIM55-205ENST00000517647 ZBTB7AO95365 584 aa14.61□□□□□ -0.07
TRIM55-205ENST00000517647 COL23A1Q86Y22 540 aaPredicted RBP14.61□□□□□ -0.07
TRIM55-205ENST00000517647 AK7Q96M32 723 aa14.61□□□□□ -0.07
TRIM55-205ENST00000517647 KCPQ6ZWJ8 1503 aa14.6□□□□□ -0.07
TRIM55-205ENST00000517647 UBR2Q8IWV8 1755 aa14.6□□□□□ -0.07
TRIM55-205ENST00000517647 NEFMP07197 916 aa14.59□□□□□ -0.07
TRIM55-205ENST00000517647 TEFQ10587 303 aa14.59□□□□□ -0.07
TRIM55-205ENST00000517647 RPS6KA4O75676 772 aa14.58□□□□□ -0.08
TRIM55-205ENST00000517647 MYH14Q7Z406 1995 aaKnown RBP14.58□□□□□ -0.08
TRIM55-205ENST00000517647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.57□□□□□ -0.08
TRIM55-205ENST00000517647 ZNF790Q6PG37 636 aa14.57□□□□□ -0.08
TRIM55-205ENST00000517647 RTF1Q92541 710 aaKnown RBP14.57□□□□□ -0.08
TRIM55-205ENST00000517647 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
TRIM55-205ENST00000517647 RTCBQ9Y3I0 505 aaKnown RBP14.57□□□□□ -0.08
TRIM55-205ENST00000517647 TJP1Q07157 1748 aa14.57□□□□□ -0.08
TRIM55-205ENST00000517647 PTCD1O75127 700 aaKnown RBP14.56□□□□□ -0.08
TRIM55-205ENST00000517647 POLD1P28340 1107 aa14.56□□□□□ -0.08
TRIM55-205ENST00000517647 NFE2L2Q16236 605 aa14.56□□□□□ -0.08
TRIM55-205ENST00000517647 AMIGO3Q86WK7 504 aa14.56□□□□□ -0.08
TRIM55-205ENST00000517647 ARXQ96QS3 562 aa14.56□□□□□ -0.08
TRIM55-205ENST00000517647 TEX13AQ9BXU3 409 aaPredicted RBP14.56□□□□□ -0.08
TRIM55-205ENST00000517647 PPP1R1BQ9UD71 204 aaPredicted RBP14.56□□□□□ -0.08
TRIM55-205ENST00000517647 GNPATO15228 680 aa14.55□□□□□ -0.08
TRIM55-205ENST00000517647 CRKLP46109 303 aaKnown RBP14.55□□□□□ -0.08
TRIM55-205ENST00000517647 CYP19A1P11511 503 aaPredicted RBP14.54□□□□□ -0.08
TRIM55-205ENST00000517647 SLC39A6Q13433 755 aa14.54□□□□□ -0.08
TRIM55-205ENST00000517647 TRAPPC3LQ5T215 181 aa14.54□□□□□ -0.08
TRIM55-205ENST00000517647 INTS5Q6P9B9 1019 aaKnown RBP14.54□□□□□ -0.08
TRIM55-205ENST00000517647 TTC5Q8N0Z6 440 aa14.54□□□□□ -0.08
TRIM55-205ENST00000517647 HEG1Q9ULI3 1381 aa14.54□□□□□ -0.08
TRIM55-205ENST00000517647 MAPK8IP3Q9UPT6 1336 aa14.53□□□□□ -0.08
TRIM55-205ENST00000517647 TAF7Q15545 349 aaPredicted RBP14.53□□□□□ -0.08
TRIM55-205ENST00000517647 PNISRQ8TF01 805 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms