RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
PABPC1-202ENST00000517403 PRKCSHP14314 528 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-202ENST00000517403 YY1P25490 414 aa11.99□□□□□ -0.49
PABPC1-202ENST00000517403 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
PABPC1-202ENST00000517403 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-202ENST00000517403 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
PABPC1-202ENST00000517403 ARXQ96QS3 562 aa11.99□□□□□ -0.49
PABPC1-202ENST00000517403 COL3A1P02461 1466 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-202ENST00000517403 SCN11AQ9UI33 1791 aa11.99□□□□□ -0.49
PABPC1-202ENST00000517403 CHD4Q14839 1912 aa11.99□□□□□ -0.49
PABPC1-202ENST00000517403 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
PABPC1-202ENST00000517403 ZNF831Q5JPB2 1677 aa11.98□□□□□ -0.49
PABPC1-202ENST00000517403 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-202ENST00000517403 PHKG2P15735 406 aa11.98□□□□□ -0.49
PABPC1-202ENST00000517403 MPRIPQ6WCQ1 1025 aa11.98□□□□□ -0.49
PABPC1-202ENST00000517403 CCER1Q8TC90 406 aaPredicted RBP11.98□□□□□ -0.49
PABPC1-202ENST00000517403 ASAP1Q9ULH1 1129 aa11.98□□□□□ -0.49
PABPC1-202ENST00000517403 GOLGB1Q14789 3259 aaKnown RBP11.98□□□□□ -0.49
PABPC1-202ENST00000517403 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
PABPC1-202ENST00000517403 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.49
PABPC1-202ENST00000517403 ATG3Q9NT62 314 aa11.95□□□□□ -0.5
PABPC1-202ENST00000517403 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
PABPC1-202ENST00000517403 MRC1P22897 1456 aa11.95□□□□□ -0.5
PABPC1-202ENST00000517403 PER1O15534 1290 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-202ENST00000517403 PHF14O94880 888 aa11.93□□□□□ -0.5
PABPC1-202ENST00000517403 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-202ENST00000517403 KLHL34Q8N239 644 aa11.93□□□□□ -0.5
PABPC1-202ENST00000517403 ZNF784Q8NCA9 323 aaPredicted RBP11.93□□□□□ -0.5
PABPC1-202ENST00000517403 N4BP2Q86UW6 1770 aaPredicted RBP11.92□□□□□ -0.5
PABPC1-202ENST00000517403 UBR2Q8IWV8 1755 aa11.92□□□□□ -0.5
PABPC1-202ENST00000517403 KCPQ6ZWJ8 1503 aa11.92□□□□□ -0.5
PABPC1-202ENST00000517403 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
PABPC1-202ENST00000517403 LOC102724428A0A0B4J2F2 783 aa11.92□□□□□ -0.5
PABPC1-202ENST00000517403 IL13P35225 146 aa11.92□□□□□ -0.5
PABPC1-202ENST00000517403 SIK1P57059 783 aa11.92□□□□□ -0.5
PABPC1-202ENST00000517403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.91□□□□□ -0.5
PABPC1-202ENST00000517403 C1QBPQ07021 282 aaKnown RBP11.91□□□□□ -0.5
PABPC1-202ENST00000517403 SLC16A10Q8TF71 515 aa11.91□□□□□ -0.5
PABPC1-202ENST00000517403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.91□□□□□ -0.53e-21■□□□□ 9.4
PABPC1-202ENST00000517403 WWC3Q9ULE0 1092 aa11.91□□□□□ -0.5
PABPC1-202ENST00000517403 SIPA1L3O60292 1781 aaPredicted RBP11.91□□□□□ -0.5
PABPC1-202ENST00000517403 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
PABPC1-202ENST00000517403 ZNF530Q6P9A1 599 aaPredicted RBP11.89□□□□□ -0.51
PABPC1-202ENST00000517403 IFNL2Q8IZJ0 200 aa11.89□□□□□ -0.51
PABPC1-202ENST00000517403 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
PABPC1-202ENST00000517403 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
PABPC1-202ENST00000517403 PXDNLA1KZ92 1463 aa11.89□□□□□ -0.51
PABPC1-202ENST00000517403 SULT6B1Q6IMI4 303 aa11.88□□□□□ -0.51
PABPC1-202ENST00000517403 MORC1Q86VD1 984 aa11.88□□□□□ -0.51
PABPC1-202ENST00000517403 GNPATO15228 680 aa11.87□□□□□ -0.51
PABPC1-202ENST00000517403 ADCY9O60503 1353 aa11.87□□□□□ -0.51
PABPC1-202ENST00000517403 C10orf71Q711Q0 1435 aa11.86□□□□□ -0.51
PABPC1-202ENST00000517403 HMOX1P09601 288 aa11.86□□□□□ -0.51
PABPC1-202ENST00000517403 MTHFSP49914 203 aa11.86□□□□□ -0.51
PABPC1-202ENST00000517403 CC2D1BQ5T0F9 858 aaKnown RBP11.86□□□□□ -0.51
PABPC1-202ENST00000517403 IFNLR1Q8IU57 520 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-202ENST00000517403 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
PABPC1-202ENST00000517403 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-202ENST00000517403 AK7Q96M32 723 aa11.86□□□□□ -0.51
PABPC1-202ENST00000517403 LGR6Q9HBX8 967 aa11.86□□□□□ -0.51
PABPC1-202ENST00000517403 POLD1P28340 1107 aa11.85□□□□□ -0.51
PABPC1-202ENST00000517403 ATP6V1AP38606 617 aa11.85□□□□□ -0.51
PABPC1-202ENST00000517403 SSFA2P28290 1259 aa11.84□□□□□ -0.51
PABPC1-202ENST00000517403 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-202ENST00000517403 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-202ENST00000517403 GPR162Q16538 588 aa11.84□□□□□ -0.51
PABPC1-202ENST00000517403 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
PABPC1-202ENST00000517403 SRP68Q9UHB9 627 aaKnown RBP11.84□□□□□ -0.51
PABPC1-202ENST00000517403 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
PABPC1-202ENST00000517403 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.51
PABPC1-202ENST00000517403 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
PABPC1-202ENST00000517403 NFATC2IPQ8NCF5 419 aa11.83□□□□□ -0.52
PABPC1-202ENST00000517403 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
PABPC1-202ENST00000517403 KNSTRNQ9Y448 316 aa11.83□□□□□ -0.52
PABPC1-202ENST00000517403 SCN7AQ01118 1682 aa11.82□□□□□ -0.52
PABPC1-202ENST00000517403 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
PABPC1-202ENST00000517403 PTCD1O75127 700 aaKnown RBP11.82□□□□□ -0.52
PABPC1-202ENST00000517403 GYS1P13807 737 aa11.82□□□□□ -0.52
PABPC1-202ENST00000517403 SLC39A6Q13433 755 aa11.82□□□□□ -0.52
PABPC1-202ENST00000517403 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
PABPC1-202ENST00000517403 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
PABPC1-202ENST00000517403 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
PABPC1-202ENST00000517403 ATP10DQ9P241 1426 aa11.82□□□□□ -0.52
PABPC1-202ENST00000517403 COL11A2P13942 1736 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-202ENST00000517403 MMP10P09238 476 aa11.81□□□□□ -0.52
PABPC1-202ENST00000517403 CRKLP46109 303 aaKnown RBP11.81□□□□□ -0.52
PABPC1-202ENST00000517403 DDR1Q08345 913 aa11.81□□□□□ -0.52
PABPC1-202ENST00000517403 PLEKHO1Q53GL0 409 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-202ENST00000517403 ANKRD31Q8N7Z5 1873 aa11.8□□□□□ -0.52
PABPC1-202ENST00000517403 NPC1L1Q9UHC9 1359 aa11.8□□□□□ -0.52
PABPC1-202ENST00000517403 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
PABPC1-202ENST00000517403 RNMTO43148 476 aaKnown RBP11.8□□□□□ -0.52
PABPC1-202ENST00000517403 CABP4P57796 275 aa11.8□□□□□ -0.52
PABPC1-202ENST00000517403 DNAJC10Q8IXB1 793 aa11.8□□□□□ -0.52
PABPC1-202ENST00000517403 CD2APQ9Y5K6 639 aa11.8□□□□□ -0.52
PABPC1-202ENST00000517403 ARFGEF1Q9Y6D6 1849 aa11.79□□□□□ -0.52
PABPC1-202ENST00000517403 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
PABPC1-202ENST00000517403 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
PABPC1-202ENST00000517403 CARMIL3Q8ND23 1372 aa11.79□□□□□ -0.52
PABPC1-202ENST00000517403 RPS6KA4O75676 772 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms