RNA–Protein interactions for RNA: ENST00000516516.1

RNU6-1038P-201, Transcript of RNA, U6 small nuclear 1038, pseudogene, humanhuman

BASIC

Gene RNU6-1038P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1038P-201ENST00000516516 TRIM22Q8IYM9 498 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 PGBD3Q8N328 593 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 LARGE2Q8N3Y3 721 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 TRERF1Q96PN7 1200 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 SLC4A9Q96Q91 983 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 NIFKQ9BYG3 293 aaKnown RBP6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 ETNK1Q9HBU6 452 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 RAB6BQ9NRW1 208 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 HRH3Q9Y5N1 445 aa6.28□□□□□ -1.4
RNU6-1038P-201ENST00000516516 USP17L3A6NCW0 530 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 USP17L4A6NCW7 530 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 PALM3A6NDB9 673 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 PIK3CDO00329 1044 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 CDK2AP1O14519 115 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 SMTNP53814 917 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 USP17L2Q6R6M4 530 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 USP17L1Q7RTZ2 530 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 FHDC1Q9C0D6 1143 aaPredicted RBP6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 STK17AQ9UEE5 414 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 PHF24Q9UPV7 400 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 PCDHGA11Q9Y5H2 935 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 GTF3C3Q9Y5Q9 886 aa6.27□□□□□ -1.41
RNU6-1038P-201ENST00000516516 SENP3-EIF4A1A0A087X0R7 540 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 CDC14CA4D256 554 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 M0R2N6 131 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 RHOQP17081 205 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 GMPRP36959 345 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 SCNN1DP51172 638 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 RIPOR1Q6ZS17 1223 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 NSFL1CQ9UNZ2 370 aaKnown RBP6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 CHMP3Q9Y3E7 222 aa6.26□□□□□ -1.41
RNU6-1038P-201ENST00000516516 A6NJY4 79 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 MTFR1Q15390 333 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 NBPF1Q3BBV0 1214 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 EFHC2Q5JST6 749 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 LARP1Q6PKG0 1096 aaKnown RBP6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 TBC1D9Q6ZT07 1266 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 VWA5B2Q8N398 1253 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 ZSCAN1Q8NBB4 408 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 ADAMTS19Q8TE59 1207 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 GAS2L1Q99501 681 aaPredicted RBP6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 ZMYND15Q9H091 742 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 DNAAF2Q9NVR5 837 aaKnown RBP6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 MKRN1Q9UHC7 482 aaKnown RBP6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 ERBB4Q15303 1308 aa6.25□□□□□ -1.41
RNU6-1038P-201ENST00000516516 TATP17735 454 aaPredicted RBP6.24□□□□□ -1.41
RNU6-1038P-201ENST00000516516 FIGNL1Q6PIW4 674 aa6.24□□□□□ -1.41
RNU6-1038P-201ENST00000516516 UCN2Q96RP3 112 aa6.24□□□□□ -1.41
RNU6-1038P-201ENST00000516516 PPP1R12CQ9BZL4 782 aa6.24□□□□□ -1.41
RNU6-1038P-201ENST00000516516 NUCKS1Q9H1E3 243 aaKnown RBP6.24□□□□□ -1.41
RNU6-1038P-201ENST00000516516 TFIP11Q9UBB9 837 aaKnown RBP6.24□□□□□ -1.41
RNU6-1038P-201ENST00000516516 TMEM229AB2RXF0 380 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 C4orf17Q53FE4 359 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 CCDC102BQ68D86 513 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 DEPDC4Q8N2C3 294 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 OGFOD1Q8N543 542 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 GAS2L2Q8NHY3 880 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 CFHR5Q9BXR6 569 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 ZDHHC3Q9NYG2 299 aa6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 MAFBQ9Y5Q3 323 aaPredicted RBP6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 GPC6Q9Y625 555 aaPredicted RBP6.23□□□□□ -1.41
RNU6-1038P-201ENST00000516516 RASA1P20936 1047 aa6.22□□□□□ -1.41
RNU6-1038P-201ENST00000516516 SIX5Q8N196 739 aa6.22□□□□□ -1.41
RNU6-1038P-201ENST00000516516 ZNF837Q96EG3 531 aaPredicted RBP6.22□□□□□ -1.41
RNU6-1038P-201ENST00000516516 COL25A1Q9BXS0 654 aaPredicted RBP6.22□□□□□ -1.41
RNU6-1038P-201ENST00000516516 VRTNQ9H8Y1 702 aa6.22□□□□□ -1.41
RNU6-1038P-201ENST00000516516 SERTAD1Q9UHV2 236 aa6.22□□□□□ -1.41
RNU6-1038P-201ENST00000516516 SEC13P55735 322 aa6.21□□□□□ -1.42
RNU6-1038P-201ENST00000516516 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
RNU6-1038P-201ENST00000516516 NLRP8Q86W28 1048 aa6.21□□□□□ -1.42
RNU6-1038P-201ENST00000516516 TPCN2Q8NHX9 752 aa6.21□□□□□ -1.42
RNU6-1038P-201ENST00000516516 CRISPLD1Q9H336 500 aa6.21□□□□□ -1.42
RNU6-1038P-201ENST00000516516 ZNF358Q9NW07 568 aa6.21□□□□□ -1.42
RNU6-1038P-201ENST00000516516 SCHIP1Q9P0W5 487 aaPredicted RBP6.21□□□□□ -1.42
RNU6-1038P-201ENST00000516516 FAM196BA6NMK8 535 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 MSX1P28360 303 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 PHKA2P46019 1235 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 PLA2G4AP47712 749 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 DBN1Q16643 649 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 CNTNAP3BQ96NU0 1288 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 CNTNAP3Q9BZ76 1288 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 MBIPQ9NS73 344 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 CABP1Q9NZU7 370 aa6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 ZNF777Q9ULD5 760 aaPredicted RBP6.2□□□□□ -1.42
RNU6-1038P-201ENST00000516516 ZBTB7BO15156 539 aaPredicted RBP6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 LMOD1P29536 600 aaPredicted RBP6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 MAP2K3P46734 347 aa6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 PSMA6P60900 246 aaKnown RBP6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 TEAD4Q15561 434 aa6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 HIF1AQ16665 826 aa6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 AIDAQ96BJ3 306 aa6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 ENAMQ9NRM1 1142 aa6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 GJA3Q9Y6H8 435 aa6.19□□□□□ -1.42
RNU6-1038P-201ENST00000516516 SLURP2P0DP57 97 aa6.18□□□□□ -1.42
RNU6-1038P-201ENST00000516516 CLDN10P78369 228 aa6.18□□□□□ -1.42
RNU6-1038P-201ENST00000516516 MAP3K10Q02779 954 aa6.18□□□□□ -1.42
RNU6-1038P-201ENST00000516516 ARSJQ5FYB0 599 aaPredicted RBP6.18□□□□□ -1.42
RNU6-1038P-201ENST00000516516 LCE2CQ5TA81 110 aa6.18□□□□□ -1.42
RNU6-1038P-201ENST00000516516 GPR161Q8N6U8 529 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms