RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 SLC52A2Q9HAB3 445 aa25.83■■□□□ 1.73
LMNA-225ENST00000515824 LRP5O75197 1615 aa25.82■■□□□ 1.72
LMNA-225ENST00000515824 ZBTB7AO95365 584 aa25.82■■□□□ 1.72
LMNA-225ENST00000515824 NEFMP07197 916 aa25.81■■□□□ 1.72
LMNA-225ENST00000515824 RBM42Q9BTD8 480 aaKnown RBP25.81■■□□□ 1.72
LMNA-225ENST00000515824 MTFR1LQ9H019 292 aa25.8■■□□□ 1.72
LMNA-225ENST00000515824 MAP3K5Q99683 1374 aa25.8■■□□□ 1.72
LMNA-225ENST00000515824 PNNQ9H307 717 aaKnown RBP25.79■■□□□ 1.72
LMNA-225ENST00000515824 PRKRIP1Q9H875 184 aaPredicted RBP25.79■■□□□ 1.72
LMNA-225ENST00000515824 PNPLA7Q6ZV29 1317 aa25.79■■□□□ 1.72
LMNA-225ENST00000515824 SLC16A10Q8TF71 515 aa25.78■■□□□ 1.72
LMNA-225ENST00000515824 AK7Q96M32 723 aa25.78■■□□□ 1.72
LMNA-225ENST00000515824 ATF5Q9Y2D1 282 aaPredicted RBP25.78■■□□□ 1.72
LMNA-225ENST00000515824 CASZ1Q86V15 1759 aa25.77■■□□□ 1.72
LMNA-225ENST00000515824 ITPK1Q13572 414 aa25.77■■□□□ 1.72
LMNA-225ENST00000515824 SCN11AQ9UI33 1791 aa25.77■■□□□ 1.72
LMNA-225ENST00000515824 PTCD1O75127 700 aaKnown RBP25.76■■□□□ 1.71
LMNA-225ENST00000515824 LINC00116Q8NCU8 138 aa25.76■■□□□ 1.71
LMNA-225ENST00000515824 FLAD1Q8NFF5 587 aa25.76■■□□□ 1.71
LMNA-225ENST00000515824 IL17REQ8NFR9 667 aa25.76■■□□□ 1.71
LMNA-225ENST00000515824 PPP1R1BQ9UD71 204 aaPredicted RBP25.76■■□□□ 1.71
LMNA-225ENST00000515824 MSH5O43196 834 aa25.75■■□□□ 1.71
LMNA-225ENST00000515824 TEFQ10587 303 aa25.75■■□□□ 1.71
LMNA-225ENST00000515824 SLC4A9Q96Q91 983 aa25.75■■□□□ 1.71
LMNA-225ENST00000515824 C5P01031 1676 aa25.74■■□□□ 1.71
LMNA-225ENST00000515824 RTF1Q92541 710 aaKnown RBP25.74■■□□□ 1.71
LMNA-225ENST00000515824 COL23A1Q86Y22 540 aaPredicted RBP25.73■■□□□ 1.71
LMNA-225ENST00000515824 SLC39A6Q13433 755 aa25.72■■□□□ 1.71
LMNA-225ENST00000515824 MRC1P22897 1456 aa25.72■■□□□ 1.71
LMNA-225ENST00000515824 HTATSF1O43719 755 aaKnown RBP25.71■■□□□ 1.71
LMNA-225ENST00000515824 PTGER2P43116 358 aa25.71■■□□□ 1.71
LMNA-225ENST00000515824 PLEKHF1Q96S99 279 aa25.71■■□□□ 1.71
LMNA-225ENST00000515824 TAF1LQ8IZX4 1826 aa25.7■■□□□ 1.71
LMNA-225ENST00000515824 C4BP0C0L5 1744 aa25.7■■□□□ 1.7
LMNA-225ENST00000515824 QSER1Q2KHR3 1735 aa25.7■■□□□ 1.7
LMNA-225ENST00000515824 ADAMTS7Q9UKP4 1686 aa25.7■■□□□ 1.7
LMNA-225ENST00000515824 MAPK8IP3Q9UPT6 1336 aa25.69■■□□□ 1.7
LMNA-225ENST00000515824 RC3H1Q5TC82 1133 aaKnown RBP25.69■■□□□ 1.7
LMNA-225ENST00000515824 TTC5Q8N0Z6 440 aa25.69■■□□□ 1.7
LMNA-225ENST00000515824 CEMIPQ8WUJ3 1361 aa25.69■■□□□ 1.7
LMNA-225ENST00000515824 GNPATO15228 680 aa25.68■■□□□ 1.7
LMNA-225ENST00000515824 SSFA2P28290 1259 aa25.68■■□□□ 1.7
LMNA-225ENST00000515824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.67■■□□□ 1.7
LMNA-225ENST00000515824 PHF14O94880 888 aa25.67■■□□□ 1.7
LMNA-225ENST00000515824 WDR43Q15061 677 aaKnown RBP eCLIP25.67■■□□□ 1.7
LMNA-225ENST00000515824 POLD1P28340 1107 aa25.66■■□□□ 1.7
LMNA-225ENST00000515824 SGIP1Q9BQI5 828 aa25.66■■□□□ 1.7
LMNA-225ENST00000515824 RTCBQ9Y3I0 505 aaKnown RBP25.66■■□□□ 1.7
LMNA-225ENST00000515824 CNTNAP4Q9C0A0 1308 aa25.65■■□□□ 1.7
LMNA-225ENST00000515824 ZNF831Q5JPB2 1677 aa25.65■■□□□ 1.7
LMNA-225ENST00000515824 NFE2L2Q16236 605 aa25.65■■□□□ 1.7
LMNA-225ENST00000515824 MCM10Q7L590 875 aa25.65■■□□□ 1.7
LMNA-225ENST00000515824 BTBD11A6QL63 1104 aa25.64■■□□□ 1.7
LMNA-225ENST00000515824 ZNF790Q6PG37 636 aa25.64■■□□□ 1.7
LMNA-225ENST00000515824 AMIGO3Q86WK7 504 aa25.64■■□□□ 1.7
LMNA-225ENST00000515824 TUBGCP6Q96RT7 1819 aa25.64■■□□□ 1.7
LMNA-225ENST00000515824 VIRMAQ69YN4 1812 aaKnown RBP25.63■■□□□ 1.69
LMNA-225ENST00000515824 DCTN1Q14203 1278 aa25.63■■□□□ 1.69
LMNA-225ENST00000515824 TRAPPC3LQ5T215 181 aa25.63■■□□□ 1.69
LMNA-225ENST00000515824 SMIM5Q71RC9 77 aa25.63■■□□□ 1.69
LMNA-225ENST00000515824 VSIG10Q8N0Z9 540 aa25.63■■□□□ 1.69
LMNA-225ENST00000515824 ARXQ96QS3 562 aa25.63■■□□□ 1.69
LMNA-225ENST00000515824 RPS6KA4O75676 772 aa25.62■■□□□ 1.69
LMNA-225ENST00000515824 DNAJC10Q8IXB1 793 aa25.62■■□□□ 1.69
LMNA-225ENST00000515824 ANP32CO43423 234 aa25.61■■□□□ 1.69
LMNA-225ENST00000515824 CRKLP46109 303 aaKnown RBP25.61■■□□□ 1.69
LMNA-225ENST00000515824 ADRA2BP18089 450 aa25.6■■□□□ 1.69
LMNA-225ENST00000515824 ADAMTS8Q9UP79 889 aa25.6■■□□□ 1.69
LMNA-225ENST00000515824 MSL1Q68DK7 614 aa25.59■■□□□ 1.69
LMNA-225ENST00000515824 ZNF496Q96IT1 587 aaPredicted RBP25.59■■□□□ 1.69
LMNA-225ENST00000515824 KCPQ6ZWJ8 1503 aa25.58■■□□□ 1.69
LMNA-225ENST00000515824 TAF7Q15545 349 aaPredicted RBP25.58■■□□□ 1.69
LMNA-225ENST00000515824 FMNL2Q96PY5 1086 aa25.58■■□□□ 1.69
LMNA-225ENST00000515824 TEX13AQ9BXU3 409 aaPredicted RBP25.58■■□□□ 1.69
LMNA-225ENST00000515824 UBR3Q6ZT12 1888 aa25.57■■□□□ 1.68
LMNA-225ENST00000515824 CYP19A1P11511 503 aaPredicted RBP25.57■■□□□ 1.68
LMNA-225ENST00000515824 RIPK4P57078 832 aa25.57■■□□□ 1.68
LMNA-225ENST00000515824 RUNDC1Q96C34 613 aa25.57■■□□□ 1.68
LMNA-225ENST00000515824 STARD3NLO95772 234 aa25.56■■□□□ 1.68
LMNA-225ENST00000515824 RFC4P35249 363 aa25.56■■□□□ 1.68
LMNA-225ENST00000515824 INTS5Q6P9B9 1019 aaKnown RBP25.56■■□□□ 1.68
LMNA-225ENST00000515824 CCDC146Q8IYE0 955 aa25.56■■□□□ 1.68
LMNA-225ENST00000515824 ARHGEF1Q92888 912 aaKnown RBP25.56■■□□□ 1.68
LMNA-225ENST00000515824 FHDC1Q9C0D6 1143 aaPredicted RBP25.56■■□□□ 1.68
LMNA-225ENST00000515824 CCDC87Q9NVE4 849 aa25.56■■□□□ 1.68
LMNA-225ENST00000515824 COL5A3P25940 1745 aaPredicted RBP25.56■■□□□ 1.68
LMNA-225ENST00000515824 HEG1Q9ULI3 1381 aa25.56■■□□□ 1.68
LMNA-225ENST00000515824 KCNQ3O43525 872 aa25.55■■□□□ 1.68
LMNA-225ENST00000515824 TMPOP42166 694 aaKnown RBP25.55■■□□□ 1.68
LMNA-225ENST00000515824 PNISRQ8TF01 805 aaKnown RBP25.54■■□□□ 1.68
LMNA-225ENST00000515824 SYT17Q9BSW7 474 aa25.54■■□□□ 1.68
LMNA-225ENST00000515824 LMOD3Q0VAK6 560 aa25.53■■□□□ 1.68
LMNA-225ENST00000515824 SIPA1L3O60292 1781 aaPredicted RBP25.53■■□□□ 1.68
LMNA-225ENST00000515824 CICQ96RK0 1608 aaPredicted RBP25.52■■□□□ 1.68
LMNA-225ENST00000515824 TJP1Q07157 1748 aa25.52■■□□□ 1.68
LMNA-225ENST00000515824 NLGN1Q8N2Q7 840 aa25.51■■□□□ 1.67
LMNA-225ENST00000515824 THUMPD2Q9BTF0 503 aaKnown RBP25.51■■□□□ 1.67
LMNA-225ENST00000515824 MYH14Q7Z406 1995 aaKnown RBP25.51■■□□□ 1.67
LMNA-225ENST00000515824 NEUROD2Q15784 382 aa25.5■■□□□ 1.67
LMNA-225ENST00000515824 UBR2Q8IWV8 1755 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms