RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 SLC4A9Q96Q91 983 aa21.1■□□□□ 0.97
SERF1B-208ENST00000515588 TUBGCP6Q96RT7 1819 aa21.1■□□□□ 0.97
SERF1B-208ENST00000515588 TAF1LQ8IZX4 1826 aa21.09■□□□□ 0.97
SERF1B-208ENST00000515588 RALBP1Q15311 655 aa21.09■□□□□ 0.97
SERF1B-208ENST00000515588 LINC00116Q8NCU8 138 aa21.09■□□□□ 0.97
SERF1B-208ENST00000515588 MTFR1LQ9H019 292 aa21.09■□□□□ 0.97
SERF1B-208ENST00000515588 SCN11AQ9UI33 1791 aa21.09■□□□□ 0.97
SERF1B-208ENST00000515588 QSER1Q2KHR3 1735 aa21.08■□□□□ 0.97
SERF1B-208ENST00000515588 AMIGO3Q86WK7 504 aa21.08■□□□□ 0.97
SERF1B-208ENST00000515588 SGIP1Q9BQI5 828 aa21.08■□□□□ 0.97
SERF1B-208ENST00000515588 SLC52A2Q9HAB3 445 aa21.08■□□□□ 0.97
SERF1B-208ENST00000515588 ATP6V1AP38606 617 aa21.07■□□□□ 0.96
SERF1B-208ENST00000515588 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
SERF1B-208ENST00000515588 ADAMTS7Q9UKP4 1686 aa21.06■□□□□ 0.96
SERF1B-208ENST00000515588 FCHSD2O94868 740 aa21.06■□□□□ 0.96
SERF1B-208ENST00000515588 GAS2L2Q8NHY3 880 aa21.06■□□□□ 0.96
SERF1B-208ENST00000515588 C4BP0C0L5 1744 aa21.06■□□□□ 0.96
SERF1B-208ENST00000515588 SMIM5Q71RC9 77 aa21.05■□□□□ 0.96
SERF1B-208ENST00000515588 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
SERF1B-208ENST00000515588 MAP3K5Q99683 1374 aa21.05■□□□□ 0.96
SERF1B-208ENST00000515588 MRC1P22897 1456 aa21.05■□□□□ 0.96
SERF1B-208ENST00000515588 HMGB2P26583 209 aaKnown RBP21.04■□□□□ 0.96
SERF1B-208ENST00000515588 IL17REQ8NFR9 667 aa21.04■□□□□ 0.96
SERF1B-208ENST00000515588 SLC16A10Q8TF71 515 aa21.04■□□□□ 0.96
SERF1B-208ENST00000515588 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
SERF1B-208ENST00000515588 PTCD1O75127 700 aaKnown RBP21.03■□□□□ 0.96
SERF1B-208ENST00000515588 AK7Q96M32 723 aa21.03■□□□□ 0.96
SERF1B-208ENST00000515588 PPP1R1BQ9UD71 204 aaPredicted RBP21.03■□□□□ 0.96
SERF1B-208ENST00000515588 SLC39A6Q13433 755 aa21.01■□□□□ 0.95
SERF1B-208ENST00000515588 VIRMAQ69YN4 1812 aaKnown RBP21.01■□□□□ 0.95
SERF1B-208ENST00000515588 MYBBP1AQ9BQG0 1328 aaKnown RBP21.01■□□□□ 0.95
SERF1B-208ENST00000515588 ZNF831Q5JPB2 1677 aa21■□□□□ 0.95
SERF1B-208ENST00000515588 MSH5O43196 834 aa21■□□□□ 0.95
SERF1B-208ENST00000515588 UBR3Q6ZT12 1888 aa20.99■□□□□ 0.95
SERF1B-208ENST00000515588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.99■□□□□ 0.95
SERF1B-208ENST00000515588 PHF14O94880 888 aa20.99■□□□□ 0.95
SERF1B-208ENST00000515588 CEMIPQ8WUJ3 1361 aa20.98■□□□□ 0.95
SERF1B-208ENST00000515588 GNPATO15228 680 aa20.98■□□□□ 0.95
SERF1B-208ENST00000515588 FLAD1Q8NFF5 587 aa20.98■□□□□ 0.95
SERF1B-208ENST00000515588 PLEKHF1Q96S99 279 aa20.98■□□□□ 0.95
SERF1B-208ENST00000515588 PRKRIP1Q9H875 184 aaPredicted RBP20.98■□□□□ 0.95
SERF1B-208ENST00000515588 SSFA2P28290 1259 aa20.97■□□□□ 0.95
SERF1B-208ENST00000515588 COL24A1Q17RW2 1714 aa20.96■□□□□ 0.95
SERF1B-208ENST00000515588 KCPQ6ZWJ8 1503 aa20.96■□□□□ 0.95
SERF1B-208ENST00000515588 ZNF316A6NFI3 1004 aaPredicted RBP20.96■□□□□ 0.95
SERF1B-208ENST00000515588 RC3H1Q5TC82 1133 aaKnown RBP20.96■□□□□ 0.95
SERF1B-208ENST00000515588 MSL1Q68DK7 614 aa20.96■□□□□ 0.95
SERF1B-208ENST00000515588 ARXQ96QS3 562 aa20.96■□□□□ 0.95
SERF1B-208ENST00000515588 CNTNAP4Q9C0A0 1308 aa20.96■□□□□ 0.95
SERF1B-208ENST00000515588 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
SERF1B-208ENST00000515588 TEFQ10587 303 aa20.95■□□□□ 0.94
SERF1B-208ENST00000515588 FHDC1Q9C0D6 1143 aaPredicted RBP20.95■□□□□ 0.94
SERF1B-208ENST00000515588 MCM10Q7L590 875 aa20.94■□□□□ 0.94
SERF1B-208ENST00000515588 DNAJC10Q8IXB1 793 aa20.94■□□□□ 0.94
SERF1B-208ENST00000515588 TJP1Q07157 1748 aa20.94■□□□□ 0.94
SERF1B-208ENST00000515588 MYH14Q7Z406 1995 aaKnown RBP20.94■□□□□ 0.94
SERF1B-208ENST00000515588 POLD1P28340 1107 aa20.93■□□□□ 0.94
SERF1B-208ENST00000515588 CRKLP46109 303 aaKnown RBP20.93■□□□□ 0.94
SERF1B-208ENST00000515588 DCTN1Q14203 1278 aa20.93■□□□□ 0.94
SERF1B-208ENST00000515588 CICQ96RK0 1608 aaPredicted RBP20.93■□□□□ 0.94
SERF1B-208ENST00000515588 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
SERF1B-208ENST00000515588 RPS6KA4O75676 772 aa20.92■□□□□ 0.94
SERF1B-208ENST00000515588 SYT17Q9BSW7 474 aa20.92■□□□□ 0.94
SERF1B-208ENST00000515588 RTCBQ9Y3I0 505 aaKnown RBP20.92■□□□□ 0.94
SERF1B-208ENST00000515588 HTATSF1O43719 755 aaKnown RBP20.91■□□□□ 0.94
SERF1B-208ENST00000515588 INTS5Q6P9B9 1019 aaKnown RBP20.91■□□□□ 0.94
SERF1B-208ENST00000515588 ZNF790Q6PG37 636 aa20.91■□□□□ 0.94
SERF1B-208ENST00000515588 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
SERF1B-208ENST00000515588 KCNQ3O43525 872 aa20.9■□□□□ 0.94
SERF1B-208ENST00000515588 ZNF496Q96IT1 587 aaPredicted RBP20.9■□□□□ 0.94
SERF1B-208ENST00000515588 UBR2Q8IWV8 1755 aa20.9■□□□□ 0.94
SERF1B-208ENST00000515588 CYP19A1P11511 503 aaPredicted RBP20.89■□□□□ 0.93
SERF1B-208ENST00000515588 NFE2L2Q16236 605 aa20.89■□□□□ 0.93
SERF1B-208ENST00000515588 TRAPPC3LQ5T215 181 aa20.89■□□□□ 0.93
SERF1B-208ENST00000515588 TTC5Q8N0Z6 440 aa20.89■□□□□ 0.93
SERF1B-208ENST00000515588 VSIG10Q8N0Z9 540 aa20.89■□□□□ 0.93
SERF1B-208ENST00000515588 ARHGEF1Q92888 912 aaKnown RBP20.89■□□□□ 0.93
SERF1B-208ENST00000515588 BTBD11A6QL63 1104 aa20.88■□□□□ 0.93
SERF1B-208ENST00000515588 NEFMP07197 916 aa20.88■□□□□ 0.93
SERF1B-208ENST00000515588 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
SERF1B-208ENST00000515588 ADRA2BP18089 450 aa20.87■□□□□ 0.93
SERF1B-208ENST00000515588 MAPK8IP3Q9UPT6 1336 aa20.86■□□□□ 0.93
SERF1B-208ENST00000515588 CCDC87Q9NVE4 849 aa20.86■□□□□ 0.93
SERF1B-208ENST00000515588 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
SERF1B-208ENST00000515588 DLG5Q8TDM6 1919 aa20.85■□□□□ 0.93
SERF1B-208ENST00000515588 RFC4P35249 363 aa20.84■□□□□ 0.93
SERF1B-208ENST00000515588 KLHL34Q8N239 644 aa20.84■□□□□ 0.93
SERF1B-208ENST00000515588 FMNL2Q96PY5 1086 aa20.84■□□□□ 0.93
SERF1B-208ENST00000515588 THUMPD2Q9BTF0 503 aaKnown RBP20.84■□□□□ 0.93
SERF1B-208ENST00000515588 ADAMTS8Q9UP79 889 aa20.84■□□□□ 0.93
SERF1B-208ENST00000515588 ZBTB1Q9Y2K1 713 aa20.84■□□□□ 0.93
SERF1B-208ENST00000515588 UTRNP46939 3433 aa20.84■□□□□ 0.93
SERF1B-208ENST00000515588 SOS1Q07889 1333 aaPredicted RBP20.83■□□□□ 0.93
SERF1B-208ENST00000515588 GOLGB1Q14789 3259 aaKnown RBP20.83■□□□□ 0.93
SERF1B-208ENST00000515588 GYS1P13807 737 aa20.83■□□□□ 0.93
SERF1B-208ENST00000515588 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
SERF1B-208ENST00000515588 WDR43Q15061 677 aaKnown RBP eCLIP20.82■□□□□ 0.92
SERF1B-208ENST00000515588 TAF7Q15545 349 aaPredicted RBP20.82■□□□□ 0.92
SERF1B-208ENST00000515588 MIS18AQ9NYP9 233 aa20.82■□□□□ 0.92
SERF1B-208ENST00000515588 SRP68Q9UHB9 627 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms