RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 MRS2Q9HD23 443 aa34.33■■■■□ 3.09
DDR1-279ENST00000515529 ADAMTS8Q9UP79 889 aa34.33■■■■□ 3.09
DDR1-279ENST00000515529 NFE2L2Q16236 605 aa34.32■■■■□ 3.08
DDR1-279ENST00000515529 ANO8Q9HCE9 1232 aaPredicted RBP34.32■■■■□ 3.08
DDR1-279ENST00000515529 IL17REQ8NFR9 667 aa34.31■■■■□ 3.08
DDR1-279ENST00000515529 MRC1P22897 1456 aa34.31■■■■□ 3.08
DDR1-279ENST00000515529 LOC102724428A0A0B4J2F2 783 aa34.3■■■■□ 3.08
DDR1-279ENST00000515529 HTATSF1O43719 755 aaKnown RBP34.3■■■■□ 3.08
DDR1-279ENST00000515529 SIK1P57059 783 aa34.3■■■■□ 3.08
DDR1-279ENST00000515529 CCDC146Q8IYE0 955 aa34.3■■■■□ 3.08
DDR1-279ENST00000515529 RBM42Q9BTD8 480 aaKnown RBP34.3■■■■□ 3.08
DDR1-279ENST00000515529 ADAMTS7Q9UKP4 1686 aa34.3■■■■□ 3.08
DDR1-279ENST00000515529 RUNDC1Q96C34 613 aa34.29■■■■□ 3.08
DDR1-279ENST00000515529 VIRMAQ69YN4 1812 aaKnown RBP34.28■■■■□ 3.08
DDR1-279ENST00000515529 SLC15A2Q16348 729 aa34.28■■■■□ 3.08
DDR1-279ENST00000515529 CCDC184Q52MB2 194 aa34.27■■■■□ 3.08
DDR1-279ENST00000515529 ATP6V1AP38606 617 aa34.26■■■■□ 3.08
DDR1-279ENST00000515529 MCM10Q7L590 875 aa34.26■■■■□ 3.08
DDR1-279ENST00000515529 CEMIPQ8WUJ3 1361 aa34.25■■■■□ 3.07
DDR1-279ENST00000515529 PAPPAQ13219 1627 aa34.24■■■■□ 3.07
DDR1-279ENST00000515529 PTCD1O75127 700 aaKnown RBP34.24■■■■□ 3.07
DDR1-279ENST00000515529 TTC5Q8N0Z6 440 aa34.23■■■■□ 3.07
DDR1-279ENST00000515529 RIPK4P57078 832 aa34.22■■■■□ 3.07
DDR1-279ENST00000515529 DCTN1Q14203 1278 aa34.22■■■■□ 3.07
DDR1-279ENST00000515529 LMOD3Q0VAK6 560 aa34.21■■■■□ 3.07
DDR1-279ENST00000515529 SLC39A6Q13433 755 aa34.21■■■■□ 3.07
DDR1-279ENST00000515529 ZNF827Q17R98 1081 aa34.21■■■■□ 3.07
DDR1-279ENST00000515529 TFCP2L1Q9NZI6 479 aa34.21■■■■□ 3.07
DDR1-279ENST00000515529 TMPOP42166 694 aaKnown RBP34.2■■■■□ 3.07
DDR1-279ENST00000515529 AKT1S1Q96B36 256 aa34.2■■■■□ 3.07
DDR1-279ENST00000515529 C5P01031 1676 aa34.19■■■■□ 3.06
DDR1-279ENST00000515529 NEUROD2Q15784 382 aa34.18■■■■□ 3.06
DDR1-279ENST00000515529 BTBD11A6QL63 1104 aa34.17■■■■□ 3.06
DDR1-279ENST00000515529 DLG5Q8TDM6 1919 aa34.17■■■■□ 3.06
DDR1-279ENST00000515529 AK7Q96M32 723 aa34.17■■■■□ 3.06
DDR1-279ENST00000515529 RRP7AQ9Y3A4 280 aaKnown RBP34.17■■■■□ 3.06
DDR1-279ENST00000515529 ITPK1Q13572 414 aa34.16■■■■□ 3.06
DDR1-279ENST00000515529 PNISRQ8TF01 805 aaKnown RBP34.16■■■■□ 3.06
DDR1-279ENST00000515529 ZNF790Q6PG37 636 aa34.14■■■■□ 3.06
DDR1-279ENST00000515529 LINC00116Q8NCU8 138 aa34.14■■■■□ 3.06
DDR1-279ENST00000515529 SLC4A9Q96Q91 983 aa34.13■■■■□ 3.05
DDR1-279ENST00000515529 TAF1LQ8IZX4 1826 aa34.13■■■■□ 3.05
DDR1-279ENST00000515529 TAF7Q15545 349 aaPredicted RBP34.12■■■■□ 3.05
DDR1-279ENST00000515529 DIEXFQ68CQ4 756 aaKnown RBP34.12■■■■□ 3.05
DDR1-279ENST00000515529 SIPA1L3O60292 1781 aaPredicted RBP34.12■■■■□ 3.05
DDR1-279ENST00000515529 C4BP0C0L5 1744 aa34.11■■■■□ 3.05
DDR1-279ENST00000515529 THUMPD2Q9BTF0 503 aaKnown RBP34.11■■■■□ 3.05
DDR1-279ENST00000515529 ZNF831Q5JPB2 1677 aa34.11■■■■□ 3.05
DDR1-279ENST00000515529 APAF1O14727 1248 aa34.08■■■■□ 3.05
DDR1-279ENST00000515529 MSH5O43196 834 aa34.08■■■■□ 3.05
DDR1-279ENST00000515529 KCPQ6ZWJ8 1503 aa34.08■■■■□ 3.05
DDR1-279ENST00000515529 VSIG10Q8N0Z9 540 aa34.07■■■■□ 3.04
DDR1-279ENST00000515529 FLAD1Q8NFF5 587 aa34.07■■■■□ 3.04
DDR1-279ENST00000515529 FMNL2Q96PY5 1086 aa34.07■■■■□ 3.04
DDR1-279ENST00000515529 PNPLA7Q6ZV29 1317 aa34.06■■■■□ 3.04
DDR1-279ENST00000515529 GNPATO15228 680 aa34.06■■■■□ 3.04
DDR1-279ENST00000515529 FAM9BQ8IZU0 186 aa34.06■■■■□ 3.04
DDR1-279ENST00000515529 ZNF496Q96IT1 587 aaPredicted RBP34.05■■■■□ 3.04
DDR1-279ENST00000515529 PDGFDQ9GZP0 370 aaPredicted RBP34.05■■■■□ 3.04
DDR1-279ENST00000515529 RC3H1Q5TC82 1133 aaKnown RBP34.04■■■■□ 3.04
DDR1-279ENST00000515529 DNAJC10Q8IXB1 793 aa34.04■■■■□ 3.04
DDR1-279ENST00000515529 CNTNAP4Q9C0A0 1308 aa34.04■■■■□ 3.04
DDR1-279ENST00000515529 QSER1Q2KHR3 1735 aa34.03■■■■□ 3.04
DDR1-279ENST00000515529 UBR2Q8IWV8 1755 aa34.03■■■■□ 3.04
DDR1-279ENST00000515529 HEG1Q9ULI3 1381 aa34.02■■■■□ 3.04
DDR1-279ENST00000515529 KCNQ3O43525 872 aa34.02■■■■□ 3.04
DDR1-279ENST00000515529 PHF14O94880 888 aa34.02■■■■□ 3.04
DDR1-279ENST00000515529 ZBTB7AO95365 584 aa34.02■■■■□ 3.04
DDR1-279ENST00000515529 SPON1Q9HCB6 807 aa34.02■■■■□ 3.04
DDR1-279ENST00000515529 MIS18AQ9NYP9 233 aa34.02■■■■□ 3.04
DDR1-279ENST00000515529 CASZ1Q86V15 1759 aa34.02■■■■□ 3.04
DDR1-279ENST00000515529 CRKLP46109 303 aaKnown RBP34.01■■■■□ 3.03
DDR1-279ENST00000515529 TEX13AQ9BXU3 409 aaPredicted RBP34.01■■■■□ 3.03
DDR1-279ENST00000515529 TRIM35Q9UPQ4 493 aa34.01■■■■□ 3.03
DDR1-279ENST00000515529 RTCBQ9Y3I0 505 aaKnown RBP34.01■■■■□ 3.03
DDR1-279ENST00000515529 TUBGCP6Q96RT7 1819 aa34■■■■□ 3.03
DDR1-279ENST00000515529 SSFA2P28290 1259 aa34■■■■□ 3.03
DDR1-279ENST00000515529 TJP1Q07157 1748 aa34■■■■□ 3.03
DDR1-279ENST00000515529 CICQ96RK0 1608 aaPredicted RBP34■■■■□ 3.03
DDR1-279ENST00000515529 COL5A3P25940 1745 aaPredicted RBP33.99■■■■□ 3.03
DDR1-279ENST00000515529 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.99■■■■□ 3.03
DDR1-279ENST00000515529 CCER2I3L3R5 266 aa33.99■■■■□ 3.03
DDR1-279ENST00000515529 STARD3NLO95772 234 aa33.99■■■■□ 3.03
DDR1-279ENST00000515529 COL23A1Q86Y22 540 aaPredicted RBP33.99■■■■□ 3.03
DDR1-279ENST00000515529 SLC16A10Q8TF71 515 aa33.99■■■■□ 3.03
DDR1-279ENST00000515529 MTFR1LQ9H019 292 aa33.99■■■■□ 3.03
DDR1-279ENST00000515529 TSPYL4Q9UJ04 414 aa33.98■■■■□ 3.03
DDR1-279ENST00000515529 CCDC87Q9NVE4 849 aa33.97■■■■□ 3.03
DDR1-279ENST00000515529 ATF5Q9Y2D1 282 aaPredicted RBP33.96■■■■□ 3.03
DDR1-279ENST00000515529 RPS6KA4O75676 772 aa33.95■■■■□ 3.03
DDR1-279ENST00000515529 CYP19A1P11511 503 aaPredicted RBP33.95■■■■□ 3.03
DDR1-279ENST00000515529 CALD1Q05682 793 aaKnown RBP33.95■■■■□ 3.03
DDR1-279ENST00000515529 BABAM1Q9NWV8 329 aa33.95■■■■□ 3.03
DDR1-279ENST00000515529 LAS1LQ9Y4W2 734 aaKnown RBP33.95■■■■□ 3.03
DDR1-279ENST00000515529 UBR3Q6ZT12 1888 aa33.95■■■■□ 3.02
DDR1-279ENST00000515529 SNRPA1P09661 255 aaKnown RBP33.94■■■■□ 3.02
DDR1-279ENST00000515529 TRAPPC3LQ5T215 181 aa33.94■■■■□ 3.02
DDR1-279ENST00000515529 LRP5O75197 1615 aa33.93■■■■□ 3.02
DDR1-279ENST00000515529 ADRA2BP18089 450 aa33.92■■■■□ 3.02
DDR1-279ENST00000515529 SMIM5Q71RC9 77 aa33.92■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms