RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 SCHIP1Q9P0W5 487 aaPredicted RBP3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 SOWAHDA6NJG2 315 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 CLN3Q13286 438 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 PPARGC1BQ86YN6 1023 aaKnown RBP3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 IL2RAP01589 272 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 TIMP2P16035 220 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 RASA1P20936 1047 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 DPYDQ12882 1025 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 SF3B2Q13435 895 aaKnown RBP3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 PPP1R26Q5T8A7 1209 aaPredicted RBP3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 ZNF697Q5TEC3 545 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 CCDC102BQ68D86 513 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 DNAJC14Q6Y2X3 702 aaPredicted RBP3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 NBPF15Q8N660 670 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 C2orf49Q9BVC5 232 aaPredicted RBP3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 PCDHB11Q9Y5F2 797 aa3.14□□□□□ -1.91
AC025539.1-201ENST00000515343 NRG2O14511 850 aaPredicted RBP3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 C21orf2O43822 256 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 ADD1P35611 737 aaKnown RBP3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 LINC01559Q495D7 138 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 MEIOBQ8N635 442 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 EHBP1Q8NDI1 1231 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 ALKBH8Q96BT7 664 aaKnown RBP3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 ZDHHC3Q9NYG2 299 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 ZBTB7CA1YPR0 619 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 GDF10P55107 478 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 ZNF784Q8NCA9 323 aaPredicted RBP3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 CCER1Q8TC90 406 aaPredicted RBP3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 ETNK1Q9HBU6 452 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 MTMR7Q9Y216 660 aa3.13□□□□□ -1.91
AC025539.1-201ENST00000515343 NNTQ13423 1086 aa3.12□□□□□ -1.91
AC025539.1-201ENST00000515343 IER5Q5VY09 327 aa3.12□□□□□ -1.91
AC025539.1-201ENST00000515343 XKR5Q6UX68 686 aa3.12□□□□□ -1.91
AC025539.1-201ENST00000515343 GMCL1Q96IK5 515 aa3.12□□□□□ -1.91
AC025539.1-201ENST00000515343 SPINT1O43278 529 aa3.12□□□□□ -1.91
AC025539.1-201ENST00000515343 SCTRP47872 440 aa3.12□□□□□ -1.91
AC025539.1-201ENST00000515343 ICMTO60725 284 aa3.12□□□□□ -1.91
AC025539.1-201ENST00000515343 RBM47A0AV96 593 aaKnown RBP3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 IGHA2P01877 340 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 ATP2B4P23634 1241 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 A6NJY4 79 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 HOXD8P13378 290 aaPredicted RBP3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 HELQQ8TDG4 1101 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 ANKRD24Q8TF21 1146 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 EFCC1Q9HA90 598 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 SOS2Q07890 1332 aaPredicted RBP3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 TNFRSF10BO14763 440 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 SAMD5Q5TGI4 173 aa3.11□□□□□ -1.91
AC025539.1-201ENST00000515343 FSHRP23945 695 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 RBCK1Q9BYM8 510 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 TLL2Q9Y6L7 1015 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 EGFRP00533 1210 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 KCNQ4P56696 695 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 FOXD4L5Q5VV16 416 aaPredicted RBP3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 FAM129BQ96TA1 746 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 TSEN34Q9BSV6 310 aaKnown RBP3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 PRKD2Q9BZL6 878 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 DMGDHQ9UI17 866 aaKnown RBP3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 ATAD2Q6PL18 1390 aa3.1□□□□□ -1.91
AC025539.1-201ENST00000515343 MAGEB6P1A0A0J9YX57 407 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 SFI1A8K8P3 1242 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 RFX1P22670 979 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 PSMA6P60900 246 aaKnown RBP3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 NOM1Q5C9Z4 860 aaKnown RBP3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 ZDHHC1Q8WTX9 485 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 CRISPLD1Q9H336 500 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 CENPCQ03188 943 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 TMPRSS4Q9NRS4 437 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 CUX2O14529 1486 aa3.09□□□□□ -1.91
AC025539.1-201ENST00000515343 A0A1W2PRU2 124 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 ARHGAP4P98171 946 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 LAMC2Q13753 1193 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 HIF1AQ16665 826 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 RTN1Q16799 776 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 CARD14Q9BXL6 1004 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 QTRT2Q9H974 415 aaKnown RBP3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 FKBP5Q13451 457 aaPredicted RBP3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 DSC3Q14574 896 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 ARID3AQ99856 593 aa3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 CCDC9Q9Y3X0 531 aaKnown RBP3.09□□□□□ -1.92
AC025539.1-201ENST00000515343 FGD1P98174 961 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 OXLD1Q5BKU9 147 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 DEPDC4Q8N2C3 294 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 RHBDD1Q8TEB9 315 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 FAM13AO94988 1023 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 FMR1Q06787 632 aaKnown RBP eCLIP3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 CYP4X1Q8N118 509 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 GJD3Q8N144 294 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 ASB16Q96NS5 453 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 NOS2P35228 1153 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 FBXO33Q7Z6M2 555 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 RNF217Q8TC41 542 aa3.08□□□□□ -1.92
AC025539.1-201ENST00000515343 ZIC2O95409 532 aaPredicted RBP3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 FKBP4Q02790 459 aaKnown RBP eCLIP3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 AGERQ15109 404 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 NLRP8Q86W28 1048 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 NPAS3Q8IXF0 933 aa3.07□□□□□ -1.92
AC025539.1-201ENST00000515343 FRMD6Q96NE9 622 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms