RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 KAT6BQ8WYB5 2073 aa15.67■□□□□ 0.1
PDLIM5-220ENST00000514830 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
PDLIM5-220ENST00000514830 ZNF831Q5JPB2 1677 aa15.66■□□□□ 0.1
PDLIM5-220ENST00000514830 BTAF1O14981 1849 aa15.66■□□□□ 0.1
PDLIM5-220ENST00000514830 TEFQ10587 303 aa15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 DCTN1Q14203 1278 aa15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 TAF7Q15545 349 aaPredicted RBP15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 CFAP44Q96MT7 982 aa15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 IFT57Q9NWB7 429 aa15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 EP400Q96L91 3159 aa15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 CICQ96RK0 1608 aaPredicted RBP15.65■□□□□ 0.1
PDLIM5-220ENST00000514830 CHL1O00533 1208 aa15.64■□□□□ 0.09
PDLIM5-220ENST00000514830 GNAI1P63096 354 aa15.64■□□□□ 0.09
PDLIM5-220ENST00000514830 GOLGA2Q08379 1002 aa15.64■□□□□ 0.09
PDLIM5-220ENST00000514830 TRMT2AQ8IZ69 625 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-220ENST00000514830 THUMPD2Q9BTF0 503 aaKnown RBP15.64■□□□□ 0.09
PDLIM5-220ENST00000514830 RGPD3A6NKT7 1758 aaPredicted RBP15.63■□□□□ 0.09
PDLIM5-220ENST00000514830 RGPD4Q7Z3J3 1758 aa15.63■□□□□ 0.09
PDLIM5-220ENST00000514830 DEFB132Q7Z7B7 95 aa15.63■□□□□ 0.09
PDLIM5-220ENST00000514830 TNS1Q9HBL0 1735 aaKnown RBP15.63■□□□□ 0.09
PDLIM5-220ENST00000514830 E9PSI1 815 aa15.62■□□□□ 0.09
PDLIM5-220ENST00000514830 CABP4P57796 275 aa15.62■□□□□ 0.09
PDLIM5-220ENST00000514830 SLFN5Q08AF3 891 aa15.62■□□□□ 0.09
PDLIM5-220ENST00000514830 NFATC2IPQ8NCF5 419 aa15.62■□□□□ 0.09
PDLIM5-220ENST00000514830 TMOD3Q9NYL9 352 aa15.62■□□□□ 0.09
PDLIM5-220ENST00000514830 SALL2Q9Y467 1007 aaPredicted RBP15.62■□□□□ 0.09
PDLIM5-220ENST00000514830 LY75O60449 1722 aa15.62■□□□□ 0.09
PDLIM5-220ENST00000514830 SENP3-EIF4A1A0A087X0R7 540 aa15.6■□□□□ 0.09
PDLIM5-220ENST00000514830 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
PDLIM5-220ENST00000514830 PIGBQ92521 554 aa15.6■□□□□ 0.09
PDLIM5-220ENST00000514830 BCL11BQ9C0K0 894 aaPredicted RBP15.6■□□□□ 0.09
PDLIM5-220ENST00000514830 MYH16Q9H6N6 1097 aa15.6■□□□□ 0.09
PDLIM5-220ENST00000514830 KCPQ6ZWJ8 1503 aa15.59■□□□□ 0.09
PDLIM5-220ENST00000514830 BTBD11A6QL63 1104 aa15.59■□□□□ 0.09
PDLIM5-220ENST00000514830 SPINK5Q9NQ38 1064 aaPredicted RBP15.59■□□□□ 0.09
PDLIM5-220ENST00000514830 HEG1Q9ULI3 1381 aa15.59■□□□□ 0.09
PDLIM5-220ENST00000514830 LAMB4A4D0S4 1761 aa15.58■□□□□ 0.08
PDLIM5-220ENST00000514830 FAM182BQ5T319 152 aa15.58■□□□□ 0.08
PDLIM5-220ENST00000514830 ZNF790Q6PG37 636 aa15.58■□□□□ 0.08
PDLIM5-220ENST00000514830 YTHDC1Q96MU7 727 aaKnown RBP15.58■□□□□ 0.08
PDLIM5-220ENST00000514830 MBIPQ9NS73 344 aa15.58■□□□□ 0.08
PDLIM5-220ENST00000514830 SOS1Q07889 1333 aaPredicted RBP15.58■□□□□ 0.08
PDLIM5-220ENST00000514830 DUSP27Q5VZP5 1158 aa15.57■□□□□ 0.08
PDLIM5-220ENST00000514830 TSPYL4Q9UJ04 414 aa15.57■□□□□ 0.08
PDLIM5-220ENST00000514830 FANCIQ9NVI1 1328 aa15.57■□□□□ 0.08
PDLIM5-220ENST00000514830 CACNA1FO60840 1977 aa15.56■□□□□ 0.08
PDLIM5-220ENST00000514830 KCNQ2O43526 872 aa15.56■□□□□ 0.08
PDLIM5-220ENST00000514830 SMARCC1Q92922 1105 aaPredicted RBP15.56■□□□□ 0.08
PDLIM5-220ENST00000514830 CDCA7LQ96GN5 454 aa15.56■□□□□ 0.08
PDLIM5-220ENST00000514830 ACSBG1Q96GR2 724 aa15.56■□□□□ 0.08
PDLIM5-220ENST00000514830 ATG3Q9NT62 314 aa15.56■□□□□ 0.08
PDLIM5-220ENST00000514830 C5P01031 1676 aa15.55■□□□□ 0.08
PDLIM5-220ENST00000514830 TJP1Q07157 1748 aa15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 HOXB7P09629 217 aa15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 EIF4A1P60842 406 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 VSIG10Q8N0Z9 540 aa15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 SYTL4Q96C24 671 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 TAF1LQ8IZX4 1826 aa15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 LRP5O75197 1615 aa15.54■□□□□ 0.08
PDLIM5-220ENST00000514830 PSDA5PKW4 1024 aaPredicted RBP15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 CT47B1P0C2W7 299 aaPredicted RBP15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 TTC5Q8N0Z6 440 aa15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 TSR2Q969E8 191 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 FMNL2Q96PY5 1086 aa15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 MIS18AQ9NYP9 233 aa15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
PDLIM5-220ENST00000514830 PALLDQ8WX93 1383 aa15.52■□□□□ 0.08
PDLIM5-220ENST00000514830 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
PDLIM5-220ENST00000514830 PLSCR1O15162 318 aa15.52■□□□□ 0.08
PDLIM5-220ENST00000514830 TRIM37O94972 964 aa15.52■□□□□ 0.08
PDLIM5-220ENST00000514830 SLC39A6Q13433 755 aa15.52■□□□□ 0.08
PDLIM5-220ENST00000514830 PTF1AQ7RTS3 328 aa15.52■□□□□ 0.08
PDLIM5-220ENST00000514830 RREB1Q92766 1687 aa15.51■□□□□ 0.07
PDLIM5-220ENST00000514830 KCNQ3O43525 872 aa15.51■□□□□ 0.07
PDLIM5-220ENST00000514830 ZNF428Q96B54 188 aa15.51■□□□□ 0.07
PDLIM5-220ENST00000514830 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
PDLIM5-220ENST00000514830 GIGYF1O75420 1035 aaPredicted RBP15.5■□□□□ 0.07
PDLIM5-220ENST00000514830 HMGB2P26583 209 aaKnown RBP15.5■□□□□ 0.07
PDLIM5-220ENST00000514830 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
PDLIM5-220ENST00000514830 TEX13AQ9BXU3 409 aaPredicted RBP15.5■□□□□ 0.07
PDLIM5-220ENST00000514830 CHMP4AQ9BY43 222 aa15.5■□□□□ 0.07
PDLIM5-220ENST00000514830 SNRPA1P09661 255 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-220ENST00000514830 EXOSC9Q06265 439 aaKnown RBP15.49■□□□□ 0.07
PDLIM5-220ENST00000514830 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
PDLIM5-220ENST00000514830 LOC102724428A0A0B4J2F2 783 aa15.48■□□□□ 0.07
PDLIM5-220ENST00000514830 SIK1P57059 783 aa15.48■□□□□ 0.07
PDLIM5-220ENST00000514830 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
PDLIM5-220ENST00000514830 VAMP4O75379 141 aa15.47■□□□□ 0.07
PDLIM5-220ENST00000514830 R3HDM1Q15032 1099 aaKnown RBP15.47■□□□□ 0.07
PDLIM5-220ENST00000514830 TWISTNBQ3B726 338 aaPredicted RBP15.47■□□□□ 0.07
PDLIM5-220ENST00000514830 SLC27A3Q5K4L6 730 aa15.47■□□□□ 0.07
PDLIM5-220ENST00000514830 NBPF14Q5TI25 921 aa15.47■□□□□ 0.07
PDLIM5-220ENST00000514830 SLC4A9Q96Q91 983 aa15.47■□□□□ 0.07
PDLIM5-220ENST00000514830 MYH14Q7Z406 1995 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-220ENST00000514830 ERBB4Q15303 1308 aa15.45■□□□□ 0.06
PDLIM5-220ENST00000514830 PTCD1O75127 700 aaKnown RBP15.45■□□□□ 0.06
PDLIM5-220ENST00000514830 APBA3O96018 575 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms