RNA–Protein interactions for RNA: ENST00000514013.1

SH3D19-209, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-209ENST00000514013 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
SH3D19-209ENST00000514013 GSE1Q14687 1217 aa13.15□□□□□ -0.3
SH3D19-209ENST00000514013 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
SH3D19-209ENST00000514013 MSL1Q68DK7 614 aa13.15□□□□□ -0.3
SH3D19-209ENST00000514013 C3orf67Q6ZVT6 689 aa13.15□□□□□ -0.3
SH3D19-209ENST00000514013 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
SH3D19-209ENST00000514013 TTC21AQ8NDW8 1320 aa13.14□□□□□ -0.31
SH3D19-209ENST00000514013 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
SH3D19-209ENST00000514013 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
SH3D19-209ENST00000514013 SPNS2Q8IVW8 549 aa13.14□□□□□ -0.31
SH3D19-209ENST00000514013 ANKRD24Q8TF21 1146 aa13.13□□□□□ -0.31
SH3D19-209ENST00000514013 NME9Q86XW9 330 aa13.12□□□□□ -0.31
SH3D19-209ENST00000514013 DDX54Q8TDD1 881 aaKnown RBP13.12□□□□□ -0.31
SH3D19-209ENST00000514013 L3MBTL3Q96JM7 780 aaPredicted RBP13.12□□□□□ -0.31
SH3D19-209ENST00000514013 USP31Q70CQ4 1352 aa13.11□□□□□ -0.31
SH3D19-209ENST00000514013 KTN1Q86UP2 1357 aaKnown RBP13.11□□□□□ -0.31
SH3D19-209ENST00000514013 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
SH3D19-209ENST00000514013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.11□□□□□ -0.31
SH3D19-209ENST00000514013 EVC2Q86UK5 1308 aa13.11□□□□□ -0.31
SH3D19-209ENST00000514013 ANKRD36BQ8N2N9 1353 aa13.1□□□□□ -0.31
SH3D19-209ENST00000514013 KIF3CO14782 793 aa13.1□□□□□ -0.31
SH3D19-209ENST00000514013 SYTL4Q96C24 671 aaPredicted RBP13.1□□□□□ -0.31
SH3D19-209ENST00000514013 WWC3Q9ULE0 1092 aa13.1□□□□□ -0.31
SH3D19-209ENST00000514013 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
SH3D19-209ENST00000514013 CCNL1Q9UK58 526 aaPredicted RBP13.09□□□□□ -0.31
SH3D19-209ENST00000514013 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
SH3D19-209ENST00000514013 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
SH3D19-209ENST00000514013 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
SH3D19-209ENST00000514013 LY75O60449 1722 aa13.08□□□□□ -0.32
SH3D19-209ENST00000514013 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
SH3D19-209ENST00000514013 DNAJC5GQ8N7S2 189 aa13.07□□□□□ -0.32
SH3D19-209ENST00000514013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.07□□□□□ -0.323e-6■□□□□ 9.2
SH3D19-209ENST00000514013 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
SH3D19-209ENST00000514013 USP54Q70EL1 1684 aa13.07□□□□□ -0.32
SH3D19-209ENST00000514013 MON2Q7Z3U7 1717 aa13.07□□□□□ -0.32
SH3D19-209ENST00000514013 CHRM1P11229 460 aaPredicted RBP13.06□□□□□ -0.32
SH3D19-209ENST00000514013 EMP3P54852 163 aa13.06□□□□□ -0.32
SH3D19-209ENST00000514013 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
SH3D19-209ENST00000514013 KAT6BQ8WYB5 2073 aa13.06□□□□□ -0.32
SH3D19-209ENST00000514013 LTN1O94822 1766 aa13.05□□□□□ -0.32
SH3D19-209ENST00000514013 MEGF6O75095 1541 aa13.05□□□□□ -0.32
SH3D19-209ENST00000514013 PSEN1P49768 467 aa13.05□□□□□ -0.32
SH3D19-209ENST00000514013 SMIM5Q71RC9 77 aa13.05□□□□□ -0.32
SH3D19-209ENST00000514013 FAM208AQ9UK61 1670 aaKnown RBP13.04□□□□□ -0.32
SH3D19-209ENST00000514013 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
SH3D19-209ENST00000514013 FBLN1P23142 703 aa13.02□□□□□ -0.33
SH3D19-209ENST00000514013 IP6K1Q92551 441 aa13.02□□□□□ -0.33
SH3D19-209ENST00000514013 APLP1P51693 650 aa13.01□□□□□ -0.33
SH3D19-209ENST00000514013 COL13A1Q5TAT6 717 aaPredicted RBP13.01□□□□□ -0.33
SH3D19-209ENST00000514013 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
SH3D19-209ENST00000514013 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
SH3D19-209ENST00000514013 USP47Q96K76 1375 aa13.01□□□□□ -0.33
SH3D19-209ENST00000514013 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
SH3D19-209ENST00000514013 HTRA3P83110 453 aa13□□□□□ -0.33
SH3D19-209ENST00000514013 SLC12A5Q9H2X9 1139 aa13□□□□□ -0.33
SH3D19-209ENST00000514013 C5P01031 1676 aa12.99□□□□□ -0.33
SH3D19-209ENST00000514013 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
SH3D19-209ENST00000514013 MAP3K19Q56UN5 1328 aa12.99□□□□□ -0.33
SH3D19-209ENST00000514013 EDC4Q6P2E9 1401 aaKnown RBP12.98□□□□□ -0.33
SH3D19-209ENST00000514013 A0A1W2PP64 1363 aa12.98□□□□□ -0.33
SH3D19-209ENST00000514013 PALLDQ8WX93 1383 aa12.98□□□□□ -0.33
SH3D19-209ENST00000514013 NMRK2Q9NPI5 230 aa12.98□□□□□ -0.33
SH3D19-209ENST00000514013 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
SH3D19-209ENST00000514013 HOXC9P31274 260 aa12.97□□□□□ -0.33
SH3D19-209ENST00000514013 PDAP1Q13442 181 aaKnown RBP12.97□□□□□ -0.33
SH3D19-209ENST00000514013 USHBP1Q8N6Y0 703 aa12.97□□□□□ -0.33
SH3D19-209ENST00000514013 TOMM70O94826 608 aa12.96□□□□□ -0.33
SH3D19-209ENST00000514013 PHF14O94880 888 aa12.96□□□□□ -0.33
SH3D19-209ENST00000514013 NBPF6Q5VWK0 638 aa12.96□□□□□ -0.33
SH3D19-209ENST00000514013 TMC1Q8TDI8 760 aa12.96□□□□□ -0.33
SH3D19-209ENST00000514013 NBPF4Q96M43 638 aa12.96□□□□□ -0.33
SH3D19-209ENST00000514013 HS3ST6Q96QI5 342 aa12.96□□□□□ -0.33
SH3D19-209ENST00000514013 RGPD2P0DJD1 1756 aa12.95□□□□□ -0.34
SH3D19-209ENST00000514013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
SH3D19-209ENST00000514013 FAM205CA6NFA0 338 aa12.95□□□□□ -0.34
SH3D19-209ENST00000514013 FLAD1Q8NFF5 587 aa12.95□□□□□ -0.34
SH3D19-209ENST00000514013 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
SH3D19-209ENST00000514013 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
SH3D19-209ENST00000514013 PCNTO95613 3336 aa12.95□□□□□ -0.34
SH3D19-209ENST00000514013 TAF1LQ8IZX4 1826 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 MPRIPQ6WCQ1 1025 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 HDGFL2Q7Z4V5 671 aaPredicted RBP12.93□□□□□ -0.34
SH3D19-209ENST00000514013 JMYQ8N9B5 988 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 KLRG1Q96E93 195 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 KRTAP3-3Q9BYR6 98 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 KRTAP3-2Q9BYR7 98 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 KIAA1551Q9HCM1 1747 aa12.93□□□□□ -0.34
SH3D19-209ENST00000514013 DPY19L2Q6NUT2 758 aa12.92□□□□□ -0.34
SH3D19-209ENST00000514013 LINC00116Q8NCU8 138 aa12.92□□□□□ -0.34
SH3D19-209ENST00000514013 WDR90Q96KV7 1748 aa12.92□□□□□ -0.34
SH3D19-209ENST00000514013 AK7Q96M32 723 aa12.92□□□□□ -0.34
SH3D19-209ENST00000514013 SIN3AQ96ST3 1273 aa12.92□□□□□ -0.34
SH3D19-209ENST00000514013 CYP27B1O15528 508 aa12.91□□□□□ -0.34
SH3D19-209ENST00000514013 AMPHP49418 695 aa12.91□□□□□ -0.34
SH3D19-209ENST00000514013 RRS1Q15050 365 aaKnown RBP12.91□□□□□ -0.34
SH3D19-209ENST00000514013 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
SH3D19-209ENST00000514013 G3V3G9 751 aa12.9□□□□□ -0.34
SH3D19-209ENST00000514013 MMP10P09238 476 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms