RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 SLC52A2Q9HAB3 445 aa14.91□□□□□ -0.02
HTT-213ENST00000513806 TMOD3Q9NYL9 352 aa14.91□□□□□ -0.02
HTT-213ENST00000513806 ASAP1Q9ULH1 1129 aa14.91□□□□□ -0.02
HTT-213ENST00000513806 LY75O60449 1722 aa14.91□□□□□ -0.02
HTT-213ENST00000513806 ERVV-2B6SEH9 535 aa14.9□□□□□ -0.02
HTT-213ENST00000513806 KCNQ3O43525 872 aa14.9□□□□□ -0.02
HTT-213ENST00000513806 APBA3O96018 575 aa14.9□□□□□ -0.02
HTT-213ENST00000513806 KCNQ4P56696 695 aa14.9□□□□□ -0.02
HTT-213ENST00000513806 UBR2Q8IWV8 1755 aa14.89□□□□□ -0.03
HTT-213ENST00000513806 EN1Q05925 392 aaPredicted RBP14.89□□□□□ -0.03
HTT-213ENST00000513806 TEFQ10587 303 aa14.89□□□□□ -0.03
HTT-213ENST00000513806 ATG3Q9NT62 314 aa14.88□□□□□ -0.03
HTT-213ENST00000513806 LAS1LQ9Y4W2 734 aaKnown RBP14.88□□□□□ -0.03
HTT-213ENST00000513806 TAF1LQ8IZX4 1826 aa14.87□□□□□ -0.03
HTT-213ENST00000513806 HTATSF1O43719 755 aaKnown RBP14.87□□□□□ -0.03
HTT-213ENST00000513806 EZH2Q15910 746 aaKnown RBP14.87□□□□□ -0.03
HTT-213ENST00000513806 C5P01031 1676 aa14.87□□□□□ -0.03
HTT-213ENST00000513806 RREB1Q92766 1687 aa14.87□□□□□ -0.03
HTT-213ENST00000513806 LMOD3Q0VAK6 560 aa14.86□□□□□ -0.03
HTT-213ENST00000513806 SF3B2Q13435 895 aaKnown RBP14.86□□□□□ -0.03
HTT-213ENST00000513806 WWC1Q8IX03 1113 aa14.86□□□□□ -0.03
HTT-213ENST00000513806 KCPQ6ZWJ8 1503 aa14.86□□□□□ -0.03
HTT-213ENST00000513806 TJP1Q07157 1748 aa14.86□□□□□ -0.03
HTT-213ENST00000513806 NUP188Q5SRE5 1749 aa14.86□□□□□ -0.03
HTT-213ENST00000513806 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
HTT-213ENST00000513806 BTBD11A6QL63 1104 aa14.85□□□□□ -0.03
HTT-213ENST00000513806 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
HTT-213ENST00000513806 HNRNPUQ00839 825 aaKnown RBP eCLIP14.85□□□□□ -0.03
HTT-213ENST00000513806 RGPD3A6NKT7 1758 aaPredicted RBP14.85□□□□□ -0.03
HTT-213ENST00000513806 RGPD4Q7Z3J3 1758 aa14.85□□□□□ -0.03
HTT-213ENST00000513806 TAF7Q15545 349 aaPredicted RBP14.84□□□□□ -0.03
HTT-213ENST00000513806 PROM2Q8N271 834 aa14.84□□□□□ -0.03
HTT-213ENST00000513806 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
HTT-213ENST00000513806 SLC4A9Q96Q91 983 aa14.84□□□□□ -0.03
HTT-213ENST00000513806 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
HTT-213ENST00000513806 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
HTT-213ENST00000513806 CAMKK2Q96RR4 588 aa14.83□□□□□ -0.04
HTT-213ENST00000513806 PRAMEF22A3QJZ6 481 aa14.82□□□□□ -0.04
HTT-213ENST00000513806 BAG6P46379 1132 aa14.82□□□□□ -0.04
HTT-213ENST00000513806 CCDC27Q2M243 656 aa14.82□□□□□ -0.04
HTT-213ENST00000513806 KRT24Q2M2I5 525 aa14.82□□□□□ -0.04
HTT-213ENST00000513806 TSR2Q969E8 191 aaKnown RBP14.82□□□□□ -0.04
HTT-213ENST00000513806 LRRC4BQ9NT99 713 aa14.82□□□□□ -0.04
HTT-213ENST00000513806 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
HTT-213ENST00000513806 COL5A3P25940 1745 aaPredicted RBP14.82□□□□□ -0.04
HTT-213ENST00000513806 TUBGCP6Q96RT7 1819 aa14.82□□□□□ -0.04
HTT-213ENST00000513806 MYH14Q7Z406 1995 aaKnown RBP14.82□□□□□ -0.04
HTT-213ENST00000513806 ITPK1Q13572 414 aa14.81□□□□□ -0.04
HTT-213ENST00000513806 TXNRD1Q16881 649 aa14.81□□□□□ -0.04
HTT-213ENST00000513806 ZNF790Q6PG37 636 aa14.81□□□□□ -0.04
HTT-213ENST00000513806 ZNF496Q96IT1 587 aaPredicted RBP14.81□□□□□ -0.04
HTT-213ENST00000513806 ZNF521Q96K83 1311 aa14.81□□□□□ -0.04
HTT-213ENST00000513806 SOCS7O14512 581 aa14.8□□□□□ -0.04
HTT-213ENST00000513806 PLSCR1O15162 318 aa14.8□□□□□ -0.04
HTT-213ENST00000513806 TTC5Q8N0Z6 440 aa14.8□□□□□ -0.04
HTT-213ENST00000513806 CDCA7LQ96GN5 454 aa14.8□□□□□ -0.04
HTT-213ENST00000513806 MBIPQ9NS73 344 aa14.8□□□□□ -0.04
HTT-213ENST00000513806 CCNL1Q9UK58 526 aaPredicted RBP14.8□□□□□ -0.04
HTT-213ENST00000513806 LOC102724428A0A0B4J2F2 783 aa14.79□□□□□ -0.04
HTT-213ENST00000513806 ZNF853P0CG23 659 aa14.79□□□□□ -0.04
HTT-213ENST00000513806 SIK1P57059 783 aa14.79□□□□□ -0.04
HTT-213ENST00000513806 SMIM5Q71RC9 77 aa14.79□□□□□ -0.04
HTT-213ENST00000513806 CCDC125Q86Z20 511 aa14.79□□□□□ -0.04
HTT-213ENST00000513806 SMARCC1Q92922 1105 aaPredicted RBP14.79□□□□□ -0.04
HTT-213ENST00000513806 LAMB4A4D0S4 1761 aa14.78□□□□□ -0.04
HTT-213ENST00000513806 CHL1O00533 1208 aa14.78□□□□□ -0.04
HTT-213ENST00000513806 ATP6V1AP38606 617 aa14.78□□□□□ -0.04
HTT-213ENST00000513806 DNAJC10Q8IXB1 793 aa14.78□□□□□ -0.04
HTT-213ENST00000513806 LINC00116Q8NCU8 138 aa14.78□□□□□ -0.04
HTT-213ENST00000513806 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
HTT-213ENST00000513806 C4BP0C0L5 1744 aa14.78□□□□□ -0.04
HTT-213ENST00000513806 ZNF831Q5JPB2 1677 aa14.77□□□□□ -0.04
HTT-213ENST00000513806 EIF4A1P60842 406 aaKnown RBP14.77□□□□□ -0.05
HTT-213ENST00000513806 WDR63Q8IWG1 891 aa14.77□□□□□ -0.05
HTT-213ENST00000513806 IFT57Q9NWB7 429 aa14.77□□□□□ -0.05
HTT-213ENST00000513806 HEG1Q9ULI3 1381 aa14.76□□□□□ -0.05
HTT-213ENST00000513806 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
HTT-213ENST00000513806 ELL2O00472 640 aaPredicted RBP14.76□□□□□ -0.05
HTT-213ENST00000513806 GNAI1P63096 354 aa14.76□□□□□ -0.05
HTT-213ENST00000513806 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
HTT-213ENST00000513806 FMNL2Q96PY5 1086 aa14.76□□□□□ -0.05
HTT-213ENST00000513806 ANO8Q9HCE9 1232 aaPredicted RBP14.76□□□□□ -0.05
HTT-213ENST00000513806 CICQ96RK0 1608 aaPredicted RBP14.76□□□□□ -0.05
HTT-213ENST00000513806 UBR3Q6ZT12 1888 aa14.76□□□□□ -0.05
HTT-213ENST00000513806 PIP4K2AP48426 406 aaPredicted RBP14.75□□□□□ -0.05
HTT-213ENST00000513806 CALD1Q05682 793 aaKnown RBP14.75□□□□□ -0.05
HTT-213ENST00000513806 ZNF827Q17R98 1081 aa14.75□□□□□ -0.05
HTT-213ENST00000513806 NECTIN2Q92692 538 aa14.75□□□□□ -0.05
HTT-213ENST00000513806 IL16Q14005 1332 aa14.74□□□□□ -0.05
HTT-213ENST00000513806 GOLGA2Q08379 1002 aa14.74□□□□□ -0.05
HTT-213ENST00000513806 AMIGO3Q86WK7 504 aa14.74□□□□□ -0.05
HTT-213ENST00000513806 TSPYL6Q8N831 410 aa14.74□□□□□ -0.05
HTT-213ENST00000513806 C8orf58Q8NAV2 365 aa14.74□□□□□ -0.05
HTT-213ENST00000513806 USP16Q9Y5T5 823 aa14.74□□□□□ -0.05
HTT-213ENST00000513806 EXOSC9Q06265 439 aaKnown RBP14.73□□□□□ -0.05
HTT-213ENST00000513806 GIGYF1O75420 1035 aaPredicted RBP14.72□□□□□ -0.05
HTT-213ENST00000513806 SLFN5Q08AF3 891 aa14.72□□□□□ -0.05
HTT-213ENST00000513806 SLC27A3Q5K4L6 730 aa14.72□□□□□ -0.05
HTT-213ENST00000513806 NGEFQ8N5V2 710 aa14.72□□□□□ -0.05
HTT-213ENST00000513806 ZBED9Q6R2W3 1325 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms