RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
CLCN3-209ENST00000513761 GLRX3O76003 335 aaKnown RBP9.15□□□□□ -0.94
CLCN3-209ENST00000513761 PDE1AP54750 535 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 FYB1O15117 783 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 CCP110O43303 1012 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 UBXN4Q92575 508 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 ARHGAP45Q92619 1136 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 GAS2L3Q86XJ1 694 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 SCAND2PQ9GZW5 306 aaPredicted RBP9.15□□□□□ -0.94
CLCN3-209ENST00000513761 BOLA2Q9H3K6 86 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 ZNF608Q9ULD9 1512 aaPredicted RBP9.15□□□□□ -0.94
CLCN3-209ENST00000513761 NUP160Q12769 1436 aa9.15□□□□□ -0.94
CLCN3-209ENST00000513761 HS1BP3Q53T59 392 aa9.15□□□□□ -0.95
CLCN3-209ENST00000513761 NOL7Q9UMY1 257 aaKnown RBP9.15□□□□□ -0.95
CLCN3-209ENST00000513761 GUCY1B3Q02153 619 aa9.15□□□□□ -0.95
CLCN3-209ENST00000513761 ANKRD44Q8N8A2 993 aa9.15□□□□□ -0.95
CLCN3-209ENST00000513761 KIF18AQ8NI77 898 aa9.15□□□□□ -0.95
CLCN3-209ENST00000513761 ACBD3Q9H3P7 528 aa9.15□□□□□ -0.95
CLCN3-209ENST00000513761 ZSCAN22P10073 491 aaPredicted RBP9.14□□□□□ -0.95
CLCN3-209ENST00000513761 OTUD7AQ8TE49 926 aaPredicted RBP9.14□□□□□ -0.95
CLCN3-209ENST00000513761 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 KDM6BO15054 1643 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 LEKR1Q6ZMV7 388 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 NECAB1Q8N987 351 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 ESYT1Q9BSJ8 1104 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 CCDC61Q9Y6R9 512 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 RAPGEF6Q8TEU7 1601 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 PPFIA3O75145 1194 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 ZNF165P49910 485 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 SH2B1Q9NRF2 756 aaPredicted RBP9.14□□□□□ -0.95
CLCN3-209ENST00000513761 NSD2O96028 1365 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 VAMP4O75379 141 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 MYL6BP14649 208 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 FLIIQ13045 1269 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 PTPRCP08575 1304 aa9.14□□□□□ -0.95
CLCN3-209ENST00000513761 CCDC186Q7Z3E2 898 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 POLR3GO15318 223 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 SFPQP23246 707 aaKnown RBP eCLIP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 C17orf53Q8N3J3 647 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 CCDC8Q9H0W5 538 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 A2MP01023 1474 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 TAF7Q15545 349 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 RAPGEF4Q8WZA2 1011 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 ERICH2A1L162 156 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 DNM1Q05193 864 aaKnown RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 CAGE1Q8TC20 777 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 AK7Q96M32 723 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 TCEANC2Q96MN5 208 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 RUFY1Q96T51 708 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 DCTPP1Q9H773 170 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 DNMT1P26358 1616 aaKnown RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 DHX16O60231 1041 aaKnown RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 CFAP100Q494V2 611 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 TMCO3Q6UWJ1 677 aa9.13□□□□□ -0.95
CLCN3-209ENST00000513761 CCDC94Q9BW85 323 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-209ENST00000513761 GNAT3A8MTJ3 354 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 MARCH6O60337 910 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 ZNF530Q6P9A1 599 aaPredicted RBP9.12□□□□□ -0.95
CLCN3-209ENST00000513761 NLRP2Q9NX02 1062 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 WDR62O43379 1518 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 URI1O94763 535 aaPredicted RBP9.12□□□□□ -0.95
CLCN3-209ENST00000513761 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.12□□□□□ -0.95
CLCN3-209ENST00000513761 V9GYY5 206 aaPredicted RBP9.12□□□□□ -0.95
CLCN3-209ENST00000513761 NAP1L1P55209 391 aaKnown RBP9.12□□□□□ -0.95
CLCN3-209ENST00000513761 IDI1Q13907 227 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 PHACTR3Q96KR7 559 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 TMX1Q9H3N1 280 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 ANKRD36BQ8N2N9 1353 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 MAGI3Q5TCQ9 1506 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 ATP10BO94823 1461 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 PATL2C9JE40 543 aaKnown RBP9.12□□□□□ -0.95
CLCN3-209ENST00000513761 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 ANTXR1Q9H6X2 564 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 ANO10Q9NW15 660 aa9.12□□□□□ -0.95
CLCN3-209ENST00000513761 FSD2A1L4K1 749 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 KRT32Q14532 448 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 ANO6Q4KMQ2 910 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 PLEKHO1Q53GL0 409 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-209ENST00000513761 TAF3Q5VWG9 929 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 CEP85Q6P2H3 762 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 PPP1R42Q7Z4L9 355 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 DDX19AQ9NUU7 478 aaKnown RBP9.11□□□□□ -0.95
CLCN3-209ENST00000513761 RRP12Q5JTH9 1297 aaKnown RBP9.11□□□□□ -0.95
CLCN3-209ENST00000513761 LAMC3Q9Y6N6 1575 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 BTBD11A6QL63 1104 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 DTNBO60941 627 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 LMBRD1Q9NUN5 540 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 BIN1O00499 593 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 ZNF445P59923 1031 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 JMYQ8N9B5 988 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 TSC1Q92574 1164 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 ITSN2Q9NZM3 1697 aa9.11□□□□□ -0.95
CLCN3-209ENST00000513761 FKBP4Q02790 459 aaKnown RBP eCLIP9.11□□□□□ -0.95
CLCN3-209ENST00000513761 AXDND1Q5T1B0 1012 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-209ENST00000513761 PTGS1P23219 599 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 USHBP1Q8N6Y0 703 aa9.1□□□□□ -0.95
CLCN3-209ENST00000513761 CHAMP1Q96JM3 812 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms