RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 ADAMTS7Q9UKP4 1686 aa27.66■■■□□ 2.02
NEIL3-202ENST00000513321 BTAF1O14981 1849 aa27.66■■■□□ 2.02
NEIL3-202ENST00000513321 SENP3-EIF4A1A0A087X0R7 540 aa27.66■■■□□ 2.02
NEIL3-202ENST00000513321 EZH2Q15910 746 aaKnown RBP27.66■■■□□ 2.02
NEIL3-202ENST00000513321 LMOD3Q0VAK6 560 aa27.65■■■□□ 2.02
NEIL3-202ENST00000513321 THUMPD2Q9BTF0 503 aaKnown RBP27.65■■■□□ 2.02
NEIL3-202ENST00000513321 ATG3Q9NT62 314 aa27.65■■■□□ 2.02
NEIL3-202ENST00000513321 SMARCC1Q92922 1105 aaPredicted RBP27.64■■■□□ 2.02
NEIL3-202ENST00000513321 TRIM35Q9UPQ4 493 aa27.64■■■□□ 2.02
NEIL3-202ENST00000513321 DLG5Q8TDM6 1919 aa27.63■■■□□ 2.01
NEIL3-202ENST00000513321 PROM2Q8N271 834 aa27.62■■■□□ 2.01
NEIL3-202ENST00000513321 MRC1P22897 1456 aa27.62■■■□□ 2.01
NEIL3-202ENST00000513321 PALLDQ8WX93 1383 aa27.61■■■□□ 2.01
NEIL3-202ENST00000513321 TXNRD1Q16881 649 aa27.61■■■□□ 2.01
NEIL3-202ENST00000513321 SLC39A6Q13433 755 aa27.59■■■□□ 2.01
NEIL3-202ENST00000513321 TAF7Q15545 349 aaPredicted RBP27.59■■■□□ 2.01
NEIL3-202ENST00000513321 VIRMAQ69YN4 1812 aaKnown RBP27.59■■■□□ 2.01
NEIL3-202ENST00000513321 BTBD11A6QL63 1104 aa27.57■■■□□ 2
NEIL3-202ENST00000513321 KCNQ4P56696 695 aa27.56■■■□□ 2
NEIL3-202ENST00000513321 SALL2Q9Y467 1007 aaPredicted RBP27.56■■■□□ 2
NEIL3-202ENST00000513321 PTCD1O75127 700 aaKnown RBP27.55■■■□□ 2
NEIL3-202ENST00000513321 SLC27A3Q5K4L6 730 aa27.55■■■□□ 2
NEIL3-202ENST00000513321 RBM42Q9BTD8 480 aaKnown RBP27.55■■■□□ 2
NEIL3-202ENST00000513321 LRRC4BQ9NT99 713 aa27.55■■■□□ 2
NEIL3-202ENST00000513321 MIS18AQ9NYP9 233 aa27.55■■■□□ 2
NEIL3-202ENST00000513321 CCNL1Q9UK58 526 aaPredicted RBP27.55■■■□□ 2
NEIL3-202ENST00000513321 LOC102724428A0A0B4J2F2 783 aa27.54■■■□□ 2
NEIL3-202ENST00000513321 SIK1P57059 783 aa27.54■■■□□ 2
NEIL3-202ENST00000513321 NCBP3Q53F19 620 aaKnown RBP27.54■■■□□ 2
NEIL3-202ENST00000513321 CCDC27Q2M243 656 aa27.53■■■□□ 2
NEIL3-202ENST00000513321 ZNF790Q6PG37 636 aa27.53■■■□□ 2
NEIL3-202ENST00000513321 TTC5Q8N0Z6 440 aa27.52■■■□□ 2
NEIL3-202ENST00000513321 RGPD3A6NKT7 1758 aaPredicted RBP27.52■■■□□ 2
NEIL3-202ENST00000513321 RGPD4Q7Z3J3 1758 aa27.52■■■□□ 2
NEIL3-202ENST00000513321 KCNQ3O43525 872 aa27.51■■■□□ 2
NEIL3-202ENST00000513321 WWC1Q8IX03 1113 aa27.51■■■□□ 2
NEIL3-202ENST00000513321 SIPA1L3O60292 1781 aaPredicted RBP27.51■■□□□ 1.99
NEIL3-202ENST00000513321 ATP6V1AP38606 617 aa27.5■■□□□ 1.99
NEIL3-202ENST00000513321 NGEFQ8N5V2 710 aa27.5■■□□□ 1.99
NEIL3-202ENST00000513321 SLC4A9Q96Q91 983 aa27.5■■□□□ 1.99
NEIL3-202ENST00000513321 LY75O60449 1722 aa27.49■■□□□ 1.99
NEIL3-202ENST00000513321 CALD1Q05682 793 aaKnown RBP27.48■■□□□ 1.99
NEIL3-202ENST00000513321 ZNF496Q96IT1 587 aaPredicted RBP27.48■■□□□ 1.99
NEIL3-202ENST00000513321 LAS1LQ9Y4W2 734 aaKnown RBP27.48■■□□□ 1.99
NEIL3-202ENST00000513321 ITPK1Q13572 414 aa27.46■■□□□ 1.99
NEIL3-202ENST00000513321 BABAM1Q9NWV8 329 aa27.46■■□□□ 1.99
NEIL3-202ENST00000513321 TSPYL4Q9UJ04 414 aa27.46■■□□□ 1.99
NEIL3-202ENST00000513321 RREB1Q92766 1687 aa27.45■■□□□ 1.99
NEIL3-202ENST00000513321 PAPPAQ13219 1627 aa27.45■■□□□ 1.99
NEIL3-202ENST00000513321 CHL1O00533 1208 aa27.45■■□□□ 1.98
NEIL3-202ENST00000513321 FMNL2Q96PY5 1086 aa27.45■■□□□ 1.98
NEIL3-202ENST00000513321 KCPQ6ZWJ8 1503 aa27.44■■□□□ 1.98
NEIL3-202ENST00000513321 NBPF14Q5TI25 921 aa27.44■■□□□ 1.98
NEIL3-202ENST00000513321 CFAP44Q96MT7 982 aa27.44■■□□□ 1.98
NEIL3-202ENST00000513321 HMGB2P26583 209 aaKnown RBP27.42■■□□□ 1.98
NEIL3-202ENST00000513321 VSIG10Q8N0Z9 540 aa27.42■■□□□ 1.98
NEIL3-202ENST00000513321 IFT57Q9NWB7 429 aa27.42■■□□□ 1.98
NEIL3-202ENST00000513321 ZNF853P0CG23 659 aa27.41■■□□□ 1.98
NEIL3-202ENST00000513321 GNAI1P63096 354 aa27.41■■□□□ 1.98
NEIL3-202ENST00000513321 WDR63Q8IWG1 891 aa27.41■■□□□ 1.98
NEIL3-202ENST00000513321 LINC00116Q8NCU8 138 aa27.41■■□□□ 1.98
NEIL3-202ENST00000513321 HEG1Q9ULI3 1381 aa27.41■■□□□ 1.98
NEIL3-202ENST00000513321 NUP188Q5SRE5 1749 aa27.41■■□□□ 1.98
NEIL3-202ENST00000513321 EIF4A1P60842 406 aaKnown RBP27.41■■□□□ 1.98
NEIL3-202ENST00000513321 DNAJC10Q8IXB1 793 aa27.41■■□□□ 1.98
NEIL3-202ENST00000513321 ANO8Q9HCE9 1232 aaPredicted RBP27.41■■□□□ 1.98
NEIL3-202ENST00000513321 STK32BQ9NY57 414 aa27.39■■□□□ 1.98
NEIL3-202ENST00000513321 IL16Q14005 1332 aa27.39■■□□□ 1.97
NEIL3-202ENST00000513321 UBR2Q8IWV8 1755 aa27.39■■□□□ 1.97
NEIL3-202ENST00000513321 AKT1S1Q96B36 256 aa27.38■■□□□ 1.97
NEIL3-202ENST00000513321 MBIPQ9NS73 344 aa27.38■■□□□ 1.97
NEIL3-202ENST00000513321 SNRPA1P09661 255 aaKnown RBP27.37■■□□□ 1.97
NEIL3-202ENST00000513321 SLC15A2Q16348 729 aa27.37■■□□□ 1.97
NEIL3-202ENST00000513321 ZNF827Q17R98 1081 aa27.37■■□□□ 1.97
NEIL3-202ENST00000513321 TEX13AQ9BXU3 409 aaPredicted RBP27.36■■□□□ 1.97
NEIL3-202ENST00000513321 ZNF521Q96K83 1311 aa27.36■■□□□ 1.97
NEIL3-202ENST00000513321 KDM3BQ7LBC6 1761 aa27.36■■□□□ 1.97
NEIL3-202ENST00000513321 ZNF831Q5JPB2 1677 aa27.36■■□□□ 1.97
NEIL3-202ENST00000513321 PRAMEF22A3QJZ6 481 aa27.35■■□□□ 1.97
NEIL3-202ENST00000513321 CYP19A1P11511 503 aaPredicted RBP27.35■■□□□ 1.97
NEIL3-202ENST00000513321 GIGYF1O75420 1035 aaPredicted RBP27.34■■□□□ 1.97
NEIL3-202ENST00000513321 HNRNPUQ00839 825 aaKnown RBP eCLIP27.34■■□□□ 1.97
NEIL3-202ENST00000513321 R3HDM1Q15032 1099 aaKnown RBP27.34■■□□□ 1.97
NEIL3-202ENST00000513321 C5P01031 1676 aa27.33■■□□□ 1.97
NEIL3-202ENST00000513321 STARD3NLO95772 234 aa27.33■■□□□ 1.97
NEIL3-202ENST00000513321 RC3H1Q5TC82 1133 aaKnown RBP27.33■■□□□ 1.97
NEIL3-202ENST00000513321 AK7Q96M32 723 aa27.33■■□□□ 1.97
NEIL3-202ENST00000513321 TFCP2L1Q9NZI6 479 aa27.33■■□□□ 1.97
NEIL3-202ENST00000513321 USP16Q9Y5T5 823 aa27.33■■□□□ 1.97
NEIL3-202ENST00000513321 TAF1LQ8IZX4 1826 aa27.32■■□□□ 1.96
NEIL3-202ENST00000513321 CRKLP46109 303 aaKnown RBP27.32■■□□□ 1.96
NEIL3-202ENST00000513321 TSR2Q969E8 191 aaKnown RBP27.32■■□□□ 1.96
NEIL3-202ENST00000513321 SPINK5Q9NQ38 1064 aaPredicted RBP27.32■■□□□ 1.96
NEIL3-202ENST00000513321 TJP1Q07157 1748 aa27.31■■□□□ 1.96
NEIL3-202ENST00000513321 PSDA5PKW4 1024 aaPredicted RBP27.31■■□□□ 1.96
NEIL3-202ENST00000513321 KRT24Q2M2I5 525 aa27.31■■□□□ 1.96
NEIL3-202ENST00000513321 INTS5Q6P9B9 1019 aaKnown RBP27.31■■□□□ 1.96
NEIL3-202ENST00000513321 CNTNAP4Q9C0A0 1308 aa27.31■■□□□ 1.96
NEIL3-202ENST00000513321 C4BP0C0L5 1744 aa27.3■■□□□ 1.96
NEIL3-202ENST00000513321 GNPATO15228 680 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms