RNA–Protein interactions for RNA: ENST00000513156.5

PTPN20-226, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 913 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-226ENST00000513156 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.16
PTPN20-226ENST00000513156 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.17
PTPN20-226ENST00000513156 PHF14O94880 888 aa14.02□□□□□ -0.17
PTPN20-226ENST00000513156 TGFB2P61812 414 aa14.02□□□□□ -0.17
PTPN20-226ENST00000513156 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.17
PTPN20-226ENST00000513156 NME9Q86XW9 330 aa14.02□□□□□ -0.17
PTPN20-226ENST00000513156 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
PTPN20-226ENST00000513156 PER1O15534 1290 aaPredicted RBP14.01□□□□□ -0.17
PTPN20-226ENST00000513156 FCHSD2O94868 740 aa14.01□□□□□ -0.17
PTPN20-226ENST00000513156 AK7Q96M32 723 aa14.01□□□□□ -0.17
PTPN20-226ENST00000513156 VIRMAQ69YN4 1812 aaKnown RBP14.01□□□□□ -0.17
PTPN20-226ENST00000513156 NSD3Q9BZ95 1437 aa14□□□□□ -0.17
PTPN20-226ENST00000513156 PALLDQ8WX93 1383 aa14□□□□□ -0.17
PTPN20-226ENST00000513156 RNF181Q9P0P0 153 aa14□□□□□ -0.17
PTPN20-226ENST00000513156 TNRC18O15417 2968 aaPredicted RBP13.99□□□□□ -0.17
PTPN20-226ENST00000513156 MMP10P09238 476 aa13.99□□□□□ -0.17
PTPN20-226ENST00000513156 DPEP1P16444 411 aa13.99□□□□□ -0.17
PTPN20-226ENST00000513156 MEGF6O75095 1541 aa13.99□□□□□ -0.17
PTPN20-226ENST00000513156 RGS19P49795 217 aa13.98□□□□□ -0.17
PTPN20-226ENST00000513156 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
PTPN20-226ENST00000513156 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
PTPN20-226ENST00000513156 MKRN1Q9UHC7 482 aaKnown RBP13.98□□□□□ -0.17
PTPN20-226ENST00000513156 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
PTPN20-226ENST00000513156 KCNA3P22001 575 aa13.97□□□□□ -0.17
PTPN20-226ENST00000513156 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
PTPN20-226ENST00000513156 SSFA2P28290 1259 aa13.97□□□□□ -0.17
PTPN20-226ENST00000513156 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
PTPN20-226ENST00000513156 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.17
PTPN20-226ENST00000513156 TIAM2Q8IVF5 1701 aa13.96□□□□□ -0.17
PTPN20-226ENST00000513156 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
PTPN20-226ENST00000513156 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-226ENST00000513156 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-226ENST00000513156 LBX1P52954 281 aa13.95□□□□□ -0.18
PTPN20-226ENST00000513156 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
PTPN20-226ENST00000513156 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
PTPN20-226ENST00000513156 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
PTPN20-226ENST00000513156 LINC00116Q8NCU8 138 aa13.93□□□□□ -0.18
PTPN20-226ENST00000513156 KIF24Q5T7B8 1368 aa13.93□□□□□ -0.18
PTPN20-226ENST00000513156 KDM6AO15550 1401 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-226ENST00000513156 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
PTPN20-226ENST00000513156 IP6K1Q92551 441 aa13.92□□□□□ -0.18
PTPN20-226ENST00000513156 AIDAQ96BJ3 306 aa13.92□□□□□ -0.18
PTPN20-226ENST00000513156 CNTNAP1P78357 1384 aa13.92□□□□□ -0.18
PTPN20-226ENST00000513156 MPRIPQ6WCQ1 1025 aa13.91□□□□□ -0.18
PTPN20-226ENST00000513156 ZC3H4Q9UPT8 1303 aaKnown RBP13.9□□□□□ -0.18
PTPN20-226ENST00000513156 GLTPD2A6NH11 291 aa13.9□□□□□ -0.18
PTPN20-226ENST00000513156 CCDC85CA6NKD9 419 aa13.9□□□□□ -0.18
PTPN20-226ENST00000513156 POTECB2RU33 542 aa13.9□□□□□ -0.18
PTPN20-226ENST00000513156 WBP1LQ9NX94 342 aa13.9□□□□□ -0.18
PTPN20-226ENST00000513156 PIM2Q9P1W9 311 aa13.9□□□□□ -0.18
PTPN20-226ENST00000513156 GNPATO15228 680 aa13.89□□□□□ -0.19
PTPN20-226ENST00000513156 AMPHP49418 695 aa13.89□□□□□ -0.19
PTPN20-226ENST00000513156 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
PTPN20-226ENST00000513156 DALRD3Q5D0E6 543 aaKnown RBP13.89□□□□□ -0.19
PTPN20-226ENST00000513156 SMARCC1Q92922 1105 aaPredicted RBP13.89□□□□□ -0.19
PTPN20-226ENST00000513156 CCDC87Q9NVE4 849 aa13.89□□□□□ -0.19
PTPN20-226ENST00000513156 MAP3K19Q56UN5 1328 aa13.89□□□□□ -0.19
PTPN20-226ENST00000513156 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
PTPN20-226ENST00000513156 HSPA8P11142 646 aaKnown RBP13.88□□□□□ -0.19
PTPN20-226ENST00000513156 RASSF7Q02833 373 aa13.88□□□□□ -0.19
PTPN20-226ENST00000513156 DICER1Q9UPY3 1922 aaKnown RBP13.88□□□□□ -0.19
PTPN20-226ENST00000513156 HOXC9P31274 260 aa13.87□□□□□ -0.19
PTPN20-226ENST00000513156 NLGN1Q8N2Q7 840 aa13.87□□□□□ -0.19
PTPN20-226ENST00000513156 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
PTPN20-226ENST00000513156 LOC102724428A0A0B4J2F2 783 aa13.86□□□□□ -0.19
PTPN20-226ENST00000513156 VEGFBP49765 207 aa13.86□□□□□ -0.19
PTPN20-226ENST00000513156 SIK1P57059 783 aa13.86□□□□□ -0.19
PTPN20-226ENST00000513156 ITPK1Q13572 414 aa13.86□□□□□ -0.19
PTPN20-226ENST00000513156 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
PTPN20-226ENST00000513156 CC2D1BQ5T0F9 858 aaKnown RBP13.86□□□□□ -0.19
PTPN20-226ENST00000513156 INSRP06213 1382 aa13.85□□□□□ -0.19
PTPN20-226ENST00000513156 FLT4P35916 1363 aa13.85□□□□□ -0.19
PTPN20-226ENST00000513156 FBLN1P23142 703 aa13.85□□□□□ -0.19
PTPN20-226ENST00000513156 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
PTPN20-226ENST00000513156 PIGBQ92521 554 aa13.84□□□□□ -0.19
PTPN20-226ENST00000513156 KIF20BQ96Q89 1820 aa13.84□□□□□ -0.19
PTPN20-226ENST00000513156 COL5A3P25940 1745 aaPredicted RBP13.84□□□□□ -0.19
PTPN20-226ENST00000513156 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.19
PTPN20-226ENST00000513156 GYS1P13807 737 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 LMNB1P20700 586 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 CHRNA5P30532 468 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 TNNT2P45379 298 aaPredicted RBP13.83□□□□□ -0.2
PTPN20-226ENST00000513156 RALBP1Q15311 655 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 EMILIN1Q9Y6C2 1016 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 PARP3Q9Y6F1 533 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 PCDH11XQ9BZA7 1347 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 PCDH11YQ9BZA8 1340 aa13.83□□□□□ -0.2
PTPN20-226ENST00000513156 CYP27B1O15528 508 aa13.82□□□□□ -0.2
PTPN20-226ENST00000513156 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
PTPN20-226ENST00000513156 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
PTPN20-226ENST00000513156 NBPF6Q5VWK0 638 aa13.82□□□□□ -0.2
PTPN20-226ENST00000513156 USHBP1Q8N6Y0 703 aa13.82□□□□□ -0.2
PTPN20-226ENST00000513156 NBPF4Q96M43 638 aa13.82□□□□□ -0.2
PTPN20-226ENST00000513156 PPM1GO15355 546 aaPredicted RBP13.81□□□□□ -0.2
PTPN20-226ENST00000513156 HSP90AB2PQ58FF8 381 aa13.81□□□□□ -0.2
PTPN20-226ENST00000513156 TRAPPC3LQ5T215 181 aa13.81□□□□□ -0.2
PTPN20-226ENST00000513156 PASKQ96RG2 1323 aa13.81□□□□□ -0.2
PTPN20-226ENST00000513156 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
PTPN20-226ENST00000513156 CASP8AP2Q9UKL3 1982 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms