RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 KCNQ4P56696 695 aa17.84■□□□□ 0.45
SDHA-215ENST00000512962 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.83■□□□□ 0.44
SDHA-215ENST00000512962 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
SDHA-215ENST00000512962 DDX27Q96GQ7 796 aaKnown RBP17.81■□□□□ 0.44
SDHA-215ENST00000512962 TRIM35Q9UPQ4 493 aa17.81■□□□□ 0.44
SDHA-215ENST00000512962 ERBB3P21860 1342 aa17.79■□□□□ 0.44
SDHA-215ENST00000512962 KCNH5Q8NCM2 988 aa17.78■□□□□ 0.44
SDHA-215ENST00000512962 RGPD2P0DJD1 1756 aa17.77■□□□□ 0.44
SDHA-215ENST00000512962 NSD2O96028 1365 aa17.77■□□□□ 0.43
SDHA-215ENST00000512962 SEMA3EO15041 775 aa17.76■□□□□ 0.43
SDHA-215ENST00000512962 FAM208AQ9UK61 1670 aaKnown RBP17.76■□□□□ 0.43
SDHA-215ENST00000512962 HAX1O00165 279 aa17.75■□□□□ 0.43
SDHA-215ENST00000512962 IL2RBP14784 551 aa17.75■□□□□ 0.43
SDHA-215ENST00000512962 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
SDHA-215ENST00000512962 NLRP2Q9NX02 1062 aa17.75■□□□□ 0.43
SDHA-215ENST00000512962 ADCY9O60503 1353 aa17.75■□□□□ 0.43
SDHA-215ENST00000512962 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
SDHA-215ENST00000512962 TTC21AQ8NDW8 1320 aa17.74■□□□□ 0.43
SDHA-215ENST00000512962 TULP1O00294 542 aaPredicted RBP17.74■□□□□ 0.43
SDHA-215ENST00000512962 POLD1P28340 1107 aa17.74■□□□□ 0.43
SDHA-215ENST00000512962 EVX2Q03828 476 aa17.74■□□□□ 0.43
SDHA-215ENST00000512962 TESPA1A2RU30 521 aaPredicted RBP17.73■□□□□ 0.43
SDHA-215ENST00000512962 C5P01031 1676 aa17.72■□□□□ 0.43
SDHA-215ENST00000512962 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
SDHA-215ENST00000512962 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
SDHA-215ENST00000512962 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
SDHA-215ENST00000512962 CAMK2BQ13554 666 aa17.71■□□□□ 0.43
SDHA-215ENST00000512962 NME9Q86XW9 330 aa17.71■□□□□ 0.43
SDHA-215ENST00000512962 ANKRD24Q8TF21 1146 aa17.71■□□□□ 0.43
SDHA-215ENST00000512962 EVC2Q86UK5 1308 aa17.71■□□□□ 0.42
SDHA-215ENST00000512962 TAF1LQ8IZX4 1826 aa17.7■□□□□ 0.42
SDHA-215ENST00000512962 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
SDHA-215ENST00000512962 MSL1Q68DK7 614 aa17.7■□□□□ 0.42
SDHA-215ENST00000512962 DPY19L2Q6NUT2 758 aa17.7■□□□□ 0.42
SDHA-215ENST00000512962 ZNF526Q8TF50 670 aaPredicted RBP17.7■□□□□ 0.42
SDHA-215ENST00000512962 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
SDHA-215ENST00000512962 ARIH1Q9Y4X5 557 aaPredicted RBP17.7■□□□□ 0.42
SDHA-215ENST00000512962 SBNO2Q9Y2G9 1366 aa17.69■□□□□ 0.42
SDHA-215ENST00000512962 HSPA6P17066 643 aa17.69■□□□□ 0.42
SDHA-215ENST00000512962 COL23A1Q86Y22 540 aaPredicted RBP17.69■□□□□ 0.42
SDHA-215ENST00000512962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
SDHA-215ENST00000512962 CLCN6P51797 869 aa17.68■□□□□ 0.42
SDHA-215ENST00000512962 DDX54Q8TDD1 881 aaKnown RBP17.68■□□□□ 0.42
SDHA-215ENST00000512962 ANKRD36BQ8N2N9 1353 aa17.67■□□□□ 0.42
SDHA-215ENST00000512962 MEGF6O75095 1541 aa17.67■□□□□ 0.42
SDHA-215ENST00000512962 GRIN3BO60391 1043 aa17.66■□□□□ 0.42
SDHA-215ENST00000512962 PRIM1P49642 420 aaKnown RBP17.66■□□□□ 0.42
SDHA-215ENST00000512962 ATN1P54259 1190 aaPredicted RBP17.66■□□□□ 0.42
SDHA-215ENST00000512962 GPHNQ9NQX3 736 aaPredicted RBP17.66■□□□□ 0.42
SDHA-215ENST00000512962 SYTL4Q96C24 671 aaPredicted RBP17.65■□□□□ 0.42
SDHA-215ENST00000512962 GPBP1L1Q9HC44 474 aaPredicted RBP17.65■□□□□ 0.42
SDHA-215ENST00000512962 WWC3Q9ULE0 1092 aa17.65■□□□□ 0.42
SDHA-215ENST00000512962 PPP1R15BQ5SWA1 713 aa17.64■□□□□ 0.41
SDHA-215ENST00000512962 PDCD7Q8N8D1 485 aaKnown RBP17.64■□□□□ 0.41
SDHA-215ENST00000512962 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
SDHA-215ENST00000512962 AMIGO3Q86WK7 504 aa17.62■□□□□ 0.41
SDHA-215ENST00000512962 MICALL2Q8IY33 904 aa17.62■□□□□ 0.41
SDHA-215ENST00000512962 CCNL1Q9UK58 526 aaPredicted RBP17.62■□□□□ 0.41
SDHA-215ENST00000512962 UBR3Q6ZT12 1888 aa17.62■□□□□ 0.41
SDHA-215ENST00000512962 KIF3CO14782 793 aa17.61■□□□□ 0.41
SDHA-215ENST00000512962 ATMINO43313 823 aaPredicted RBP17.61■□□□□ 0.41
SDHA-215ENST00000512962 LTV1Q96GA3 475 aaPredicted RBP17.61■□□□□ 0.41
SDHA-215ENST00000512962 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
SDHA-215ENST00000512962 L3MBTL2Q969R5 705 aa17.6■□□□□ 0.41
SDHA-215ENST00000512962 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
SDHA-215ENST00000512962 C4BP0C0L5 1744 aa17.6■□□□□ 0.41
SDHA-215ENST00000512962 ZC3H15Q8WU90 426 aaKnown RBP17.59■□□□□ 0.41
SDHA-215ENST00000512962 FBLN1P23142 703 aa17.58■□□□□ 0.4
SDHA-215ENST00000512962 IRX5P78411 483 aaPredicted RBP17.58■□□□□ 0.4
SDHA-215ENST00000512962 ASTLQ6HA08 431 aaPredicted RBP17.58■□□□□ 0.4
SDHA-215ENST00000512962 ITGB4P16144 1822 aa17.58■□□□□ 0.4
SDHA-215ENST00000512962 A0A1W2PP64 1363 aa17.57■□□□□ 0.4
SDHA-215ENST00000512962 IP6K1Q92551 441 aa17.57■□□□□ 0.4
SDHA-215ENST00000512962 CD2APQ9Y5K6 639 aa17.57■□□□□ 0.4
SDHA-215ENST00000512962 WDR90Q96KV7 1748 aa17.57■□□□□ 0.4
SDHA-215ENST00000512962 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
SDHA-215ENST00000512962 ROCK2O75116 1388 aaKnown RBP17.56■□□□□ 0.4
SDHA-215ENST00000512962 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
SDHA-215ENST00000512962 SLC12A5Q9H2X9 1139 aa17.55■□□□□ 0.4
SDHA-215ENST00000512962 MAP2P11137 1827 aaKnown RBP17.55■□□□□ 0.4
SDHA-215ENST00000512962 USP47Q96K76 1375 aa17.54■□□□□ 0.4
SDHA-215ENST00000512962 N4BP2Q86UW6 1770 aaPredicted RBP17.54■□□□□ 0.4
SDHA-215ENST00000512962 DSG2Q14126 1118 aa17.54■□□□□ 0.4
SDHA-215ENST00000512962 IER5LQ5T953 404 aa17.54■□□□□ 0.4
SDHA-215ENST00000512962 SMYD5Q6GMV2 418 aa17.54■□□□□ 0.4
SDHA-215ENST00000512962 DNAJC5GQ8N7S2 189 aa17.54■□□□□ 0.4
SDHA-215ENST00000512962 MAP3K19Q56UN5 1328 aa17.53■□□□□ 0.4
SDHA-215ENST00000512962 OCEL1Q9H607 264 aa17.53■□□□□ 0.4
SDHA-215ENST00000512962 KIF13BQ9NQT8 1826 aa17.53■□□□□ 0.4
SDHA-215ENST00000512962 USHBP1Q8N6Y0 703 aa17.52■□□□□ 0.4
SDHA-215ENST00000512962 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
SDHA-215ENST00000512962 HOXC9P31274 260 aa17.51■□□□□ 0.39
SDHA-215ENST00000512962 PALLDQ8WX93 1383 aa17.51■□□□□ 0.39
SDHA-215ENST00000512962 TMC2Q8TDI7 906 aa17.5■□□□□ 0.39
SDHA-215ENST00000512962 TMC1Q8TDI8 760 aa17.5■□□□□ 0.39
SDHA-215ENST00000512962 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
SDHA-215ENST00000512962 TMEM121BQ9BXQ6 578 aaPredicted RBP17.5■□□□□ 0.39
SDHA-215ENST00000512962 EMILIN3Q9NT22 766 aa17.5■□□□□ 0.39
SDHA-215ENST00000512962 BOLA1Q9Y3E2 137 aa17.5■□□□□ 0.39
SDHA-215ENST00000512962 BRCA1P38398 1863 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms