RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 EPB41L2O43491 1005 aaKnown RBP14.61□□□□□ -0.07
COL11A1-210ENST00000512756 FAM177A1Q8N128 213 aaPredicted RBP14.61□□□□□ -0.07
COL11A1-210ENST00000512756 UBXN4Q92575 508 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 LRP2BPQ9P2M1 347 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 CTAGE5O15320 804 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 SMARCA5O60264 1052 aaPredicted RBP14.6□□□□□ -0.07
COL11A1-210ENST00000512756 ATP2B2Q01814 1243 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 BMP2KLQ5H9B9 411 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 RAI14Q9P0K7 980 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 LIMCH1Q9UPQ0 1083 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 IDH1O75874 414 aaKnown RBP14.6□□□□□ -0.07
COL11A1-210ENST00000512756 SFPQP23246 707 aaKnown RBP eCLIP14.6□□□□□ -0.07
COL11A1-210ENST00000512756 IGHMBP2P38935 993 aaKnown RBP14.6□□□□□ -0.07
COL11A1-210ENST00000512756 CNKSR2Q8WXI2 1034 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 FERMT3Q86UX7 667 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 ZHX3Q9H4I2 956 aa14.6□□□□□ -0.07
COL11A1-210ENST00000512756 KIAA0754O94854 1291 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 STARD3NLO95772 234 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 TRIM27P14373 513 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 ARHGAP29Q52LW3 1261 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 PDCL3Q9H2J4 239 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 STK11IPQ8N1F8 1099 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 SCAF11Q99590 1463 aaKnown RBP14.59□□□□□ -0.07
COL11A1-210ENST00000512756 CCDC196A0A1B0GTZ2 297 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 ZSCAN12O43309 604 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 WWC2Q6AWC2 1192 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 IL16Q14005 1332 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 CUL7Q14999 1698 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 TMEM132AQ24JP5 1023 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 GBP3Q9H0R5 595 aa14.59□□□□□ -0.07
COL11A1-210ENST00000512756 SKIDA1Q1XH10 827 aa14.58□□□□□ -0.07
COL11A1-210ENST00000512756 TNPO1Q92973 898 aaKnown RBP14.58□□□□□ -0.07
COL11A1-210ENST00000512756 PTPN14Q15678 1187 aa14.58□□□□□ -0.08
COL11A1-210ENST00000512756 EIF5P55010 431 aaKnown RBP14.58□□□□□ -0.08
COL11A1-210ENST00000512756 METTL24Q5JXM2 366 aa14.58□□□□□ -0.08
COL11A1-210ENST00000512756 DNAAF4Q8WXU2 420 aa14.58□□□□□ -0.08
COL11A1-210ENST00000512756 CAMK4Q16566 473 aa14.57□□□□□ -0.08
COL11A1-210ENST00000512756 BOLA2Q9H3K6 86 aa14.57□□□□□ -0.08
COL11A1-210ENST00000512756 ZNF287Q9HBT7 754 aa14.57□□□□□ -0.08
COL11A1-210ENST00000512756 SSFA2P28290 1259 aa14.57□□□□□ -0.08
COL11A1-210ENST00000512756 PHAXQ9H814 394 aaKnown RBP14.57□□□□□ -0.08
COL11A1-210ENST00000512756 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
COL11A1-210ENST00000512756 IFIT1P09914 478 aaKnown RBP14.56□□□□□ -0.08
COL11A1-210ENST00000512756 CCDC148Q8NFR7 591 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 KIF14Q15058 1648 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 GOLGA6L7A0A1B0GV03 622 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 WAPLQ7Z5K2 1190 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 ZNF397Q8NF99 534 aaPredicted RBP14.56□□□□□ -0.08
COL11A1-210ENST00000512756 NEMFO60524 1076 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 KIF18AQ8NI77 898 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 C8orf76Q96K31 380 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 DBF4Q9UBU7 674 aaPredicted RBP14.56□□□□□ -0.08
COL11A1-210ENST00000512756 KIAA1328Q86T90 577 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 HYPKQ9NX55 129 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 FAM135AQ9P2D6 1515 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 NME9Q86XW9 330 aa14.56□□□□□ -0.08
COL11A1-210ENST00000512756 SSBP05455 408 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL11A1-210ENST00000512756 MCM5P33992 734 aa14.55□□□□□ -0.08
COL11A1-210ENST00000512756 ZRSR2Q15696 482 aaKnown RBP14.55□□□□□ -0.08
COL11A1-210ENST00000512756 TMCO3Q6UWJ1 677 aa14.55□□□□□ -0.08
COL11A1-210ENST00000512756 LRRFIP2Q9Y608 721 aaKnown RBP14.55□□□□□ -0.08
COL11A1-210ENST00000512756 TTC21BQ7Z4L5 1316 aa14.55□□□□□ -0.08
COL11A1-210ENST00000512756 NEFHP12036 1026 aa14.55□□□□□ -0.08
COL11A1-210ENST00000512756 ANKRD18AQ8IVF6 992 aa14.55□□□□□ -0.08
COL11A1-210ENST00000512756 TAF4BQ92750 862 aa14.55□□□□□ -0.08
COL11A1-210ENST00000512756 EVI5LQ96CN4 794 aa14.55□□□□□ -0.08
COL11A1-210ENST00000512756 HMGB2P26583 209 aaKnown RBP14.55□□□□□ -0.08
COL11A1-210ENST00000512756 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 EMILIN1Q9Y6C2 1016 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 ADGRF5Q8IZF2 1346 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 WASLO00401 505 aaPredicted RBP14.54□□□□□ -0.08
COL11A1-210ENST00000512756 TBC1D9Q6ZT07 1266 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 MYD88Q99836 296 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 ZC3H6P61129 1189 aaKnown RBP14.54□□□□□ -0.08
COL11A1-210ENST00000512756 FLIIQ13045 1269 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 ECHDC1Q9NTX5 307 aa14.54□□□□□ -0.08
COL11A1-210ENST00000512756 F6X3S4 739 aa14.53□□□□□ -0.08
COL11A1-210ENST00000512756 ARHGAP45Q92619 1136 aa14.53□□□□□ -0.08
COL11A1-210ENST00000512756 NAPBQ9H115 298 aa14.53□□□□□ -0.08
COL11A1-210ENST00000512756 SEPT7Q16181 437 aaKnown RBP14.53□□□□□ -0.08
COL11A1-210ENST00000512756 CAVIN2O95810 425 aa14.53□□□□□ -0.08
COL11A1-210ENST00000512756 ABCF2Q9UG63 623 aa14.53□□□□□ -0.08
COL11A1-210ENST00000512756 USP8P40818 1118 aa14.52□□□□□ -0.08
COL11A1-210ENST00000512756 HDAC1Q13547 482 aaPredicted RBP14.52□□□□□ -0.08
COL11A1-210ENST00000512756 SKAP1Q86WV1 359 aa14.52□□□□□ -0.08
COL11A1-210ENST00000512756 CCDC102AQ96A19 550 aa14.52□□□□□ -0.08
COL11A1-210ENST00000512756 TOP1P11387 765 aaKnown RBP14.52□□□□□ -0.08
COL11A1-210ENST00000512756 MAP3K12Q12852 859 aa14.52□□□□□ -0.08
COL11A1-210ENST00000512756 KLHL34Q8N239 644 aa14.52□□□□□ -0.08
COL11A1-210ENST00000512756 CLIP2Q9UDT6 1046 aa14.52□□□□□ -0.08
COL11A1-210ENST00000512756 ZNF652Q9Y2D9 606 aa14.52□□□□□ -0.08
COL11A1-210ENST00000512756 HSP90AB3PQ58FF7 597 aa14.52□□□□□ -0.09
COL11A1-210ENST00000512756 AEBP2Q6ZN18 517 aaPredicted RBP14.52□□□□□ -0.09
COL11A1-210ENST00000512756 RNF41Q9H4P4 317 aaPredicted RBP14.52□□□□□ -0.09
COL11A1-210ENST00000512756 KIF5CO60282 957 aa14.52□□□□□ -0.09
COL11A1-210ENST00000512756 GSDMDP57764 484 aa14.52□□□□□ -0.09
COL11A1-210ENST00000512756 SPA17Q15506 151 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms