RNA–Protein interactions for RNA: ENST00000512345.5

LDB2-214, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 923 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-214ENST00000512345 NBPF6Q5VWK0 638 aa13.65□□□□□ -0.22
LDB2-214ENST00000512345 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
LDB2-214ENST00000512345 NBPF4Q96M43 638 aa13.65□□□□□ -0.22
LDB2-214ENST00000512345 PLEKHF1Q96S99 279 aa13.65□□□□□ -0.22
LDB2-214ENST00000512345 EYA1Q99502 592 aa13.65□□□□□ -0.22
LDB2-214ENST00000512345 MEGF6O75095 1541 aa13.64□□□□□ -0.23
LDB2-214ENST00000512345 BTAF1O14981 1849 aa13.64□□□□□ -0.23
LDB2-214ENST00000512345 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
LDB2-214ENST00000512345 RSPH6AQ9H0K4 717 aa13.64□□□□□ -0.23
LDB2-214ENST00000512345 SENP3-EIF4A1A0A087X0R7 540 aa13.63□□□□□ -0.23
LDB2-214ENST00000512345 APAF1O14727 1248 aa13.63□□□□□ -0.23
LDB2-214ENST00000512345 PTGER2P43116 358 aa13.63□□□□□ -0.23
LDB2-214ENST00000512345 LRRC4BQ9NT99 713 aa13.63□□□□□ -0.23
LDB2-214ENST00000512345 IGSF1Q8N6C5 1336 aa13.63□□□□□ -0.23
LDB2-214ENST00000512345 PAPPAQ13219 1627 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 PRKAR2BP31323 418 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
LDB2-214ENST00000512345 EVX2Q03828 476 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 USHBP1Q8N6Y0 703 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 RAPGEF4Q8WZA2 1011 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 SYTL4Q96C24 671 aaPredicted RBP13.62□□□□□ -0.23
LDB2-214ENST00000512345 MTFR1LQ9H019 292 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 RGPD2P0DJD1 1756 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 ZBED9Q6R2W3 1325 aa13.62□□□□□ -0.23
LDB2-214ENST00000512345 NEFMP07197 916 aa13.61□□□□□ -0.23
LDB2-214ENST00000512345 ZNF827Q17R98 1081 aa13.61□□□□□ -0.23
LDB2-214ENST00000512345 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
LDB2-214ENST00000512345 AEBP1Q8IUX7 1158 aa13.61□□□□□ -0.23
LDB2-214ENST00000512345 SALL2Q9Y467 1007 aaPredicted RBP13.61□□□□□ -0.23
LDB2-214ENST00000512345 MAPK8IP3Q9UPT6 1336 aa13.61□□□□□ -0.23
LDB2-214ENST00000512345 KAT6BQ8WYB5 2073 aa13.6□□□□□ -0.23
LDB2-214ENST00000512345 TATP17735 454 aaPredicted RBP13.6□□□□□ -0.23
LDB2-214ENST00000512345 NGEFQ8N5V2 710 aa13.6□□□□□ -0.23
LDB2-214ENST00000512345 KDRP35968 1356 aa13.59□□□□□ -0.23
LDB2-214ENST00000512345 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
LDB2-214ENST00000512345 ECM2O94769 699 aaPredicted RBP13.59□□□□□ -0.23
LDB2-214ENST00000512345 SGIP1Q9BQI5 828 aa13.59□□□□□ -0.23
LDB2-214ENST00000512345 CENPBP07199 599 aaPredicted RBP13.58□□□□□ -0.24
LDB2-214ENST00000512345 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
LDB2-214ENST00000512345 DOT1LQ8TEK3 1739 aa13.58□□□□□ -0.24
LDB2-214ENST00000512345 TMPOP42166 694 aaKnown RBP13.57□□□□□ -0.24
LDB2-214ENST00000512345 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
LDB2-214ENST00000512345 PCDH11XQ9BZA7 1347 aa13.57□□□□□ -0.24
LDB2-214ENST00000512345 PCDH11YQ9BZA8 1340 aa13.57□□□□□ -0.24
LDB2-214ENST00000512345 NCAPD2Q15021 1401 aa13.56□□□□□ -0.24
LDB2-214ENST00000512345 YY1P25490 414 aa13.56□□□□□ -0.24
LDB2-214ENST00000512345 KCNQ4P56696 695 aa13.56□□□□□ -0.24
LDB2-214ENST00000512345 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
LDB2-214ENST00000512345 NFE2L2Q16236 605 aa13.56□□□□□ -0.24
LDB2-214ENST00000512345 SYT17Q9BSW7 474 aa13.56□□□□□ -0.24
LDB2-214ENST00000512345 FHDC1Q9C0D6 1143 aaPredicted RBP13.56□□□□□ -0.24
LDB2-214ENST00000512345 SSUH2Q9Y2M2 353 aa13.56□□□□□ -0.24
LDB2-214ENST00000512345 SPDYE2BA6NHP3 402 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 SPDYE6P0CI01 402 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 RIPK4P57078 832 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 CCDC27Q2M243 656 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 SPDYE2Q495Y8 402 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 PLCD3Q8N3E9 789 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 SLC16A10Q8TF71 515 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 ARXQ96QS3 562 aa13.55□□□□□ -0.24
LDB2-214ENST00000512345 CCNL1Q9UK58 526 aaPredicted RBP13.55□□□□□ -0.24
LDB2-214ENST00000512345 CYP27B1O15528 508 aa13.54□□□□□ -0.24
LDB2-214ENST00000512345 TFCP2L1Q9NZI6 479 aa13.54□□□□□ -0.24
LDB2-214ENST00000512345 PNPLA7Q6ZV29 1317 aa13.54□□□□□ -0.24
LDB2-214ENST00000512345 ZNF521Q96K83 1311 aa13.54□□□□□ -0.24
LDB2-214ENST00000512345 LY75O60449 1722 aa13.53□□□□□ -0.24
LDB2-214ENST00000512345 WWC1Q8IX03 1113 aa13.53□□□□□ -0.24
LDB2-214ENST00000512345 MTHFSDQ2M296 383 aaKnown RBP13.52□□□□□ -0.25
LDB2-214ENST00000512345 GAS2L2Q8NHY3 880 aa13.52□□□□□ -0.25
LDB2-214ENST00000512345 TRIM35Q9UPQ4 493 aa13.52□□□□□ -0.25
LDB2-214ENST00000512345 MAP3K5Q99683 1374 aa13.52□□□□□ -0.25
LDB2-214ENST00000512345 QSER1Q2KHR3 1735 aa13.52□□□□□ -0.25
LDB2-214ENST00000512345 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
LDB2-214ENST00000512345 POLD1P28340 1107 aa13.51□□□□□ -0.25
LDB2-214ENST00000512345 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
LDB2-214ENST00000512345 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
LDB2-214ENST00000512345 MPRIPQ6WCQ1 1025 aa13.51□□□□□ -0.25
LDB2-214ENST00000512345 WDR63Q8IWG1 891 aa13.51□□□□□ -0.25
LDB2-214ENST00000512345 SPG7Q9UQ90 795 aa13.51□□□□□ -0.25
LDB2-214ENST00000512345 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
LDB2-214ENST00000512345 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
LDB2-214ENST00000512345 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
LDB2-214ENST00000512345 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
LDB2-214ENST00000512345 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
LDB2-214ENST00000512345 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.5□□□□□ -0.25
LDB2-214ENST00000512345 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
LDB2-214ENST00000512345 HMGB2P26583 209 aaKnown RBP13.49□□□□□ -0.25
LDB2-214ENST00000512345 BBXQ8WY36 941 aaPredicted RBP13.49□□□□□ -0.25
LDB2-214ENST00000512345 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
LDB2-214ENST00000512345 CDCA7LQ96GN5 454 aa13.49□□□□□ -0.25
LDB2-214ENST00000512345 TUBGCP6Q96RT7 1819 aa13.48□□□□□ -0.25
LDB2-214ENST00000512345 RGL2O15211 777 aa13.48□□□□□ -0.25
LDB2-214ENST00000512345 SLFN5Q08AF3 891 aa13.48□□□□□ -0.25
LDB2-214ENST00000512345 COL23A1Q86Y22 540 aaPredicted RBP13.48□□□□□ -0.25
LDB2-214ENST00000512345 PLEKHG2Q9H7P9 1386 aa13.47□□□□□ -0.25
LDB2-214ENST00000512345 GNAT3A8MTJ3 354 aa13.47□□□□□ -0.25
LDB2-214ENST00000512345 HTATSF1O43719 755 aaKnown RBP13.47□□□□□ -0.25
LDB2-214ENST00000512345 PIGBQ92521 554 aa13.47□□□□□ -0.25
LDB2-214ENST00000512345 RTF1Q92541 710 aaKnown RBP13.47□□□□□ -0.25
LDB2-214ENST00000512345 TOGARAM1Q9Y4F4 1720 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms