RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 C22orf23Q9BZE7 217 aa18.52■□□□□ 0.56
SNCAIP-216ENST00000512146 ERBB3P21860 1342 aa18.51■□□□□ 0.55
SNCAIP-216ENST00000512146 CACNA1FO60840 1977 aa18.51■□□□□ 0.55
SNCAIP-216ENST00000512146 SLC4A10Q6U841 1118 aa18.51■□□□□ 0.55
SNCAIP-216ENST00000512146 PLEKHM2Q8IWE5 1019 aa18.51■□□□□ 0.55
SNCAIP-216ENST00000512146 PXDNQ92626 1479 aa18.5■□□□□ 0.55
SNCAIP-216ENST00000512146 KDM3BQ7LBC6 1761 aa18.5■□□□□ 0.55
SNCAIP-216ENST00000512146 RNMTO43148 476 aaKnown RBP18.5■□□□□ 0.55
SNCAIP-216ENST00000512146 FKBP5Q13451 457 aaPredicted RBP18.5■□□□□ 0.55
SNCAIP-216ENST00000512146 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
SNCAIP-216ENST00000512146 NPHP3Q7Z494 1330 aa18.49■□□□□ 0.55
SNCAIP-216ENST00000512146 HMMRO75330 724 aa18.49■□□□□ 0.55
SNCAIP-216ENST00000512146 RBM25P49756 843 aaKnown RBP18.49■□□□□ 0.55
SNCAIP-216ENST00000512146 MFAP1P55081 439 aaKnown RBP18.49■□□□□ 0.55
SNCAIP-216ENST00000512146 PLEKHG2Q9H7P9 1386 aa18.49■□□□□ 0.55
SNCAIP-216ENST00000512146 GNAI2P04899 355 aa18.49■□□□□ 0.55
SNCAIP-216ENST00000512146 GNAI3P08754 354 aa18.49■□□□□ 0.55
SNCAIP-216ENST00000512146 HEG1Q9ULI3 1381 aa18.48■□□□□ 0.55
SNCAIP-216ENST00000512146 TEFQ10587 303 aa18.48■□□□□ 0.55
SNCAIP-216ENST00000512146 RTL5Q5HYW3 569 aaPredicted RBP18.48■□□□□ 0.55
SNCAIP-216ENST00000512146 C1orf141Q5JVX7 400 aa18.48■□□□□ 0.55
SNCAIP-216ENST00000512146 ABCC6O95255 1503 aa18.48■□□□□ 0.55
SNCAIP-216ENST00000512146 ADAMTS7Q9UKP4 1686 aa18.47■□□□□ 0.55
SNCAIP-216ENST00000512146 N4BP2Q86UW6 1770 aaPredicted RBP18.47■□□□□ 0.55
SNCAIP-216ENST00000512146 MPRIPQ6WCQ1 1025 aa18.47■□□□□ 0.55
SNCAIP-216ENST00000512146 TNS3Q68CZ2 1445 aa18.47■□□□□ 0.55
SNCAIP-216ENST00000512146 BTBD11A6QL63 1104 aa18.46■□□□□ 0.55
SNCAIP-216ENST00000512146 GSPT1P15170 499 aaKnown RBP18.46■□□□□ 0.55
SNCAIP-216ENST00000512146 ZC3H6P61129 1189 aaKnown RBP18.46■□□□□ 0.55
SNCAIP-216ENST00000512146 NECTIN2Q92692 538 aa18.46■□□□□ 0.55
SNCAIP-216ENST00000512146 TBC1D2Q9BYX2 928 aa18.46■□□□□ 0.55
SNCAIP-216ENST00000512146 KCNQ3O43525 872 aa18.45■□□□□ 0.54
SNCAIP-216ENST00000512146 TBC1D9Q6ZT07 1266 aa18.45■□□□□ 0.54
SNCAIP-216ENST00000512146 TTC22Q5TAA0 569 aa18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 COL18A1P39060 1754 aa18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 SPATA31A3Q5VYP0 1347 aa18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 HSPA2P54652 639 aa18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 DDX17Q92841 729 aaKnown RBP18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 USP44Q9H0E7 712 aa18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 PHAXQ9H814 394 aaKnown RBP18.44■□□□□ 0.54
SNCAIP-216ENST00000512146 CPDO75976 1380 aa18.43■□□□□ 0.54
SNCAIP-216ENST00000512146 EIF5BO60841 1220 aaKnown RBP18.43■□□□□ 0.54
SNCAIP-216ENST00000512146 CDC45O75419 566 aa18.43■□□□□ 0.54
SNCAIP-216ENST00000512146 ATP8B2P98198 1209 aa18.43■□□□□ 0.54
SNCAIP-216ENST00000512146 C16orf71Q8IYS4 520 aaPredicted RBP18.43■□□□□ 0.54
SNCAIP-216ENST00000512146 NFKBIBQ15653 356 aa18.42■□□□□ 0.54
SNCAIP-216ENST00000512146 OSBPL3Q9H4L5 887 aa18.42■□□□□ 0.54
SNCAIP-216ENST00000512146 ANTXR1Q9H6X2 564 aa18.42■□□□□ 0.54
SNCAIP-216ENST00000512146 PLEKHG5O94827 1062 aa18.42■□□□□ 0.54
SNCAIP-216ENST00000512146 CHPF2Q9P2E5 772 aa18.42■□□□□ 0.54
SNCAIP-216ENST00000512146 GIGYF1O75420 1035 aaPredicted RBP18.41■□□□□ 0.54
SNCAIP-216ENST00000512146 EIF2S2P20042 333 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-216ENST00000512146 OTUD7AQ8TE49 926 aaPredicted RBP18.4■□□□□ 0.54
SNCAIP-216ENST00000512146 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
SNCAIP-216ENST00000512146 SIPA1L3O60292 1781 aaPredicted RBP18.4■□□□□ 0.54
SNCAIP-216ENST00000512146 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
SNCAIP-216ENST00000512146 DBF4Q9UBU7 674 aaPredicted RBP18.39■□□□□ 0.54
SNCAIP-216ENST00000512146 CRYBG1Q9Y4K1 1723 aa18.39■□□□□ 0.54
SNCAIP-216ENST00000512146 SMARCA5O60264 1052 aaPredicted RBP18.39■□□□□ 0.53
SNCAIP-216ENST00000512146 BEND3Q5T5X7 828 aa18.39■□□□□ 0.53
SNCAIP-216ENST00000512146 SNX21Q969T3 373 aa18.39■□□□□ 0.53
SNCAIP-216ENST00000512146 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
SNCAIP-216ENST00000512146 SALL3Q9BXA9 1300 aa18.39■□□□□ 0.53
SNCAIP-216ENST00000512146 PNMA6EA0A0J9YXQ4 647 aa18.38■□□□□ 0.53
SNCAIP-216ENST00000512146 BRINP3Q76B58 766 aa18.38■□□□□ 0.53
SNCAIP-216ENST00000512146 DNAAF4Q8WXU2 420 aa18.38■□□□□ 0.53
SNCAIP-216ENST00000512146 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
SNCAIP-216ENST00000512146 LRRFIP2Q9Y608 721 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-216ENST00000512146 IBTKQ9P2D0 1353 aaPredicted RBP18.38■□□□□ 0.53
SNCAIP-216ENST00000512146 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 SSH3Q8TE77 659 aa18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 KIF2CQ99661 725 aa18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 PHKG2P15735 406 aa18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 ADCY9O60503 1353 aa18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 KDM6AO15550 1401 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-216ENST00000512146 MEGF6O75095 1541 aa18.36■□□□□ 0.53
SNCAIP-216ENST00000512146 PI4KAP2A4QPH2 592 aa18.36■□□□□ 0.53
SNCAIP-216ENST00000512146 SDSP20132 328 aa18.36■□□□□ 0.53
SNCAIP-216ENST00000512146 PI4KAP1Q8N8J0 262 aa18.36■□□□□ 0.53
SNCAIP-216ENST00000512146 CABLES1Q8TDN4 633 aa18.36■□□□□ 0.53
SNCAIP-216ENST00000512146 DEKP35659 375 aaKnown RBP18.35■□□□□ 0.53
SNCAIP-216ENST00000512146 PDE1AP54750 535 aa18.35■□□□□ 0.53
SNCAIP-216ENST00000512146 POLA2Q14181 598 aa18.35■□□□□ 0.53
SNCAIP-216ENST00000512146 LRRCC1Q9C099 1032 aa18.35■□□□□ 0.53
SNCAIP-216ENST00000512146 SLC52A2Q9HAB3 445 aa18.35■□□□□ 0.53
SNCAIP-216ENST00000512146 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
SNCAIP-216ENST00000512146 STRCQ7RTU9 1775 aa18.34■□□□□ 0.53
SNCAIP-216ENST00000512146 SOS2Q07890 1332 aaPredicted RBP18.34■□□□□ 0.53
SNCAIP-216ENST00000512146 MRC1P22897 1456 aa18.33■□□□□ 0.53
SNCAIP-216ENST00000512146 KDM4FA0A1W2PPD8 638 aa18.33■□□□□ 0.53
SNCAIP-216ENST00000512146 APBB1O00213 710 aa18.33■□□□□ 0.53
SNCAIP-216ENST00000512146 IFNL2Q8IZJ0 200 aa18.33■□□□□ 0.53
SNCAIP-216ENST00000512146 HYPKQ9NX55 129 aa18.33■□□□□ 0.53
SNCAIP-216ENST00000512146 ALDH1L1O75891 902 aa18.33■□□□□ 0.52
SNCAIP-216ENST00000512146 ZNF790Q6PG37 636 aa18.33■□□□□ 0.52
SNCAIP-216ENST00000512146 STAP2Q9UGK3 403 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms