RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 WDR63Q8IWG1 891 aa13.32□□□□□ -0.28
SUB1-210ENST00000511988 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
SUB1-210ENST00000511988 TRIM35Q9UPQ4 493 aa13.32□□□□□ -0.28
SUB1-210ENST00000511988 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
SUB1-210ENST00000511988 IL16Q14005 1332 aa13.32□□□□□ -0.28
SUB1-210ENST00000511988 MRC1P22897 1456 aa13.31□□□□□ -0.28
SUB1-210ENST00000511988 SIPA1L3O60292 1781 aaPredicted RBP13.31□□□□□ -0.28
SUB1-210ENST00000511988 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
SUB1-210ENST00000511988 CENPBP07199 599 aaPredicted RBP13.31□□□□□ -0.28
SUB1-210ENST00000511988 RTF1Q92541 710 aaKnown RBP13.31□□□□□ -0.28
SUB1-210ENST00000511988 PTGER2P43116 358 aa13.3□□□□□ -0.28
SUB1-210ENST00000511988 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
SUB1-210ENST00000511988 ZCRB1Q8TBF4 217 aaKnown RBP13.3□□□□□ -0.28
SUB1-210ENST00000511988 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
SUB1-210ENST00000511988 HSP90AB1P08238 724 aaKnown RBP13.29□□□□□ -0.28
SUB1-210ENST00000511988 HSPA6P17066 643 aa13.29□□□□□ -0.28
SUB1-210ENST00000511988 IFNL2Q8IZJ0 200 aa13.29□□□□□ -0.28
SUB1-210ENST00000511988 CEMIPQ8WUJ3 1361 aa13.29□□□□□ -0.28
SUB1-210ENST00000511988 E9PSI1 815 aa13.28□□□□□ -0.28
SUB1-210ENST00000511988 PHKG2P15735 406 aa13.28□□□□□ -0.28
SUB1-210ENST00000511988 ATF5Q9Y2D1 282 aaPredicted RBP13.28□□□□□ -0.28
SUB1-210ENST00000511988 KDM6AO15550 1401 aaPredicted RBP13.28□□□□□ -0.28
SUB1-210ENST00000511988 TOGARAM1Q9Y4F4 1720 aa13.27□□□□□ -0.28
SUB1-210ENST00000511988 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.28
SUB1-210ENST00000511988 MYH16Q9H6N6 1097 aa13.27□□□□□ -0.29
SUB1-210ENST00000511988 DOT1LQ8TEK3 1739 aa13.27□□□□□ -0.29
SUB1-210ENST00000511988 CYP27B1O15528 508 aa13.26□□□□□ -0.29
SUB1-210ENST00000511988 DDB1Q16531 1140 aa13.26□□□□□ -0.29
SUB1-210ENST00000511988 GPR162Q16538 588 aa13.26□□□□□ -0.29
SUB1-210ENST00000511988 ANO8Q9HCE9 1232 aaPredicted RBP13.26□□□□□ -0.29
SUB1-210ENST00000511988 IFT57Q9NWB7 429 aa13.26□□□□□ -0.29
SUB1-210ENST00000511988 EXOC5O00471 708 aa13.25□□□□□ -0.29
SUB1-210ENST00000511988 GNAI1P63096 354 aa13.25□□□□□ -0.29
SUB1-210ENST00000511988 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
SUB1-210ENST00000511988 MCM10Q7L590 875 aa13.25□□□□□ -0.29
SUB1-210ENST00000511988 DCAF5Q96JK2 942 aa13.25□□□□□ -0.29
SUB1-210ENST00000511988 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
SUB1-210ENST00000511988 RNMTO43148 476 aaKnown RBP13.24□□□□□ -0.29
SUB1-210ENST00000511988 PRELPP51888 382 aa13.24□□□□□ -0.29
SUB1-210ENST00000511988 DCTN1Q14203 1278 aa13.24□□□□□ -0.29
SUB1-210ENST00000511988 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
SUB1-210ENST00000511988 COL13A1Q5TAT6 717 aaPredicted RBP13.24□□□□□ -0.29
SUB1-210ENST00000511988 THUMPD2Q9BTF0 503 aaKnown RBP13.24□□□□□ -0.29
SUB1-210ENST00000511988 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
SUB1-210ENST00000511988 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
SUB1-210ENST00000511988 TEFQ10587 303 aa13.23□□□□□ -0.29
SUB1-210ENST00000511988 TRMT2AQ8IZ69 625 aaKnown RBP13.23□□□□□ -0.29
SUB1-210ENST00000511988 IL17REQ8NFR9 667 aa13.23□□□□□ -0.29
SUB1-210ENST00000511988 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
SUB1-210ENST00000511988 CFAP44Q96MT7 982 aa13.23□□□□□ -0.29
SUB1-210ENST00000511988 BABAM1Q9NWV8 329 aa13.23□□□□□ -0.29
SUB1-210ENST00000511988 ITGB4P16144 1822 aa13.23□□□□□ -0.29
SUB1-210ENST00000511988 ZNF853P0CG23 659 aa13.22□□□□□ -0.29
SUB1-210ENST00000511988 DUSP27Q5VZP5 1158 aa13.22□□□□□ -0.29
SUB1-210ENST00000511988 MPRIPQ6WCQ1 1025 aa13.22□□□□□ -0.29
SUB1-210ENST00000511988 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
SUB1-210ENST00000511988 GOLGB1Q14789 3259 aaKnown RBP13.21□□□□□ -0.29
SUB1-210ENST00000511988 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
SUB1-210ENST00000511988 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
SUB1-210ENST00000511988 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.29
SUB1-210ENST00000511988 NHSQ6T4R5 1651 aa13.21□□□□□ -0.3
SUB1-210ENST00000511988 BCL9O00512 1426 aa13.21□□□□□ -0.3
SUB1-210ENST00000511988 ERVV-2B6SEH9 535 aa13.2□□□□□ -0.3
SUB1-210ENST00000511988 CHL1O00533 1208 aa13.2□□□□□ -0.3
SUB1-210ENST00000511988 TAF7Q15545 349 aaPredicted RBP13.2□□□□□ -0.3
SUB1-210ENST00000511988 TNS4Q8IZW8 715 aa13.2□□□□□ -0.3
SUB1-210ENST00000511988 SLC52A2Q9HAB3 445 aa13.2□□□□□ -0.3
SUB1-210ENST00000511988 LGR6Q9HBX8 967 aa13.2□□□□□ -0.3
SUB1-210ENST00000511988 MBIPQ9NS73 344 aa13.19□□□□□ -0.3
SUB1-210ENST00000511988 TSPYL4Q9UJ04 414 aa13.19□□□□□ -0.3
SUB1-210ENST00000511988 LAS1LQ9Y4W2 734 aaKnown RBP13.19□□□□□ -0.3
SUB1-210ENST00000511988 CT47B1P0C2W7 299 aaPredicted RBP13.18□□□□□ -0.3
SUB1-210ENST00000511988 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
SUB1-210ENST00000511988 BCL11BQ9C0K0 894 aaPredicted RBP13.18□□□□□ -0.3
SUB1-210ENST00000511988 LAMB4A4D0S4 1761 aa13.17□□□□□ -0.3
SUB1-210ENST00000511988 ATP10DQ9P241 1426 aa13.17□□□□□ -0.3
SUB1-210ENST00000511988 CABP4P57796 275 aa13.17□□□□□ -0.3
SUB1-210ENST00000511988 MARCH10Q8NA82 808 aaPredicted RBP13.17□□□□□ -0.3
SUB1-210ENST00000511988 SBF2Q86WG5 1849 aa13.17□□□□□ -0.3
SUB1-210ENST00000511988 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
SUB1-210ENST00000511988 BTBD11A6QL63 1104 aa13.16□□□□□ -0.3
SUB1-210ENST00000511988 ARXQ96QS3 562 aa13.16□□□□□ -0.3
SUB1-210ENST00000511988 TMOD3Q9NYL9 352 aa13.16□□□□□ -0.3
SUB1-210ENST00000511988 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
SUB1-210ENST00000511988 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
SUB1-210ENST00000511988 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
SUB1-210ENST00000511988 MTFR1LQ9H019 292 aa13.15□□□□□ -0.3
SUB1-210ENST00000511988 GPBP1L1Q9HC44 474 aaPredicted RBP13.15□□□□□ -0.3
SUB1-210ENST00000511988 PCDH10Q9P2E7 1040 aa13.15□□□□□ -0.3
SUB1-210ENST00000511988 KCPQ6ZWJ8 1503 aa13.14□□□□□ -0.31
SUB1-210ENST00000511988 EXOSC9Q06265 439 aaKnown RBP13.14□□□□□ -0.31
SUB1-210ENST00000511988 NFATC2IPQ8NCF5 419 aa13.14□□□□□ -0.31
SUB1-210ENST00000511988 C5P01031 1676 aa13.14□□□□□ -0.31
SUB1-210ENST00000511988 BTAF1O14981 1849 aa13.13□□□□□ -0.31
SUB1-210ENST00000511988 KAT6BQ8WYB5 2073 aa13.13□□□□□ -0.31
SUB1-210ENST00000511988 ZNF831Q5JPB2 1677 aa13.13□□□□□ -0.31
SUB1-210ENST00000511988 ZNF790Q6PG37 636 aa13.13□□□□□ -0.31
SUB1-210ENST00000511988 TTC5Q8N0Z6 440 aa13.13□□□□□ -0.31
SUB1-210ENST00000511988 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
SUB1-210ENST00000511988 HEG1Q9ULI3 1381 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms