RNA–Protein interactions for RNA: ENST00000511914.1

HOXA4-203, Transcript of homeobox A4, humanhuman

TSL 1 (best)

Gene HOXA4, Length 982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-203ENST00000511914 SMG6Q86US8 1419 aaKnown RBP13.78□□□□□ -0.2
HOXA4-203ENST00000511914 SHANK3Q9BYB0 1731 aa13.78□□□□□ -0.2
HOXA4-203ENST00000511914 KCNQ4P56696 695 aa13.77□□□□□ -0.21
HOXA4-203ENST00000511914 POLKQ9UBT6 870 aa13.77□□□□□ -0.21
HOXA4-203ENST00000511914 LY75O60449 1722 aa13.76□□□□□ -0.21
HOXA4-203ENST00000511914 SYTL4Q96C24 671 aaPredicted RBP13.76□□□□□ -0.21
HOXA4-203ENST00000511914 FARP1Q9Y4F1 1045 aaPredicted RBP13.76□□□□□ -0.21
HOXA4-203ENST00000511914 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
HOXA4-203ENST00000511914 GPR162Q16538 588 aa13.75□□□□□ -0.21
HOXA4-203ENST00000511914 PELP1Q8IZL8 1130 aaKnown RBP13.75□□□□□ -0.21
HOXA4-203ENST00000511914 PNNQ9H307 717 aaKnown RBP13.75□□□□□ -0.21
HOXA4-203ENST00000511914 COL24A1Q17RW2 1714 aa13.75□□□□□ -0.21
HOXA4-203ENST00000511914 GOLGB1Q14789 3259 aaKnown RBP13.75□□□□□ -0.21
HOXA4-203ENST00000511914 DIAPH1O60610 1272 aaKnown RBP13.74□□□□□ -0.21
HOXA4-203ENST00000511914 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
HOXA4-203ENST00000511914 KIF24Q5T7B8 1368 aa13.73□□□□□ -0.21
HOXA4-203ENST00000511914 FBLN1P23142 703 aa13.73□□□□□ -0.21
HOXA4-203ENST00000511914 RUNDC1Q96C34 613 aa13.73□□□□□ -0.21
HOXA4-203ENST00000511914 PNPLA7Q6ZV29 1317 aa13.72□□□□□ -0.21
HOXA4-203ENST00000511914 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
HOXA4-203ENST00000511914 IP6K1Q92551 441 aa13.72□□□□□ -0.21
HOXA4-203ENST00000511914 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
HOXA4-203ENST00000511914 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
HOXA4-203ENST00000511914 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
HOXA4-203ENST00000511914 POLD1P28340 1107 aa13.71□□□□□ -0.21
HOXA4-203ENST00000511914 PRIM1P49642 420 aaKnown RBP13.71□□□□□ -0.21
HOXA4-203ENST00000511914 MEGF6O75095 1541 aa13.7□□□□□ -0.22
HOXA4-203ENST00000511914 FCHSD2O94868 740 aa13.7□□□□□ -0.22
HOXA4-203ENST00000511914 AMPHP49418 695 aa13.7□□□□□ -0.22
HOXA4-203ENST00000511914 SLC27A3Q5K4L6 730 aa13.7□□□□□ -0.22
HOXA4-203ENST00000511914 C5P01031 1676 aa13.69□□□□□ -0.22
HOXA4-203ENST00000511914 MAP3K19Q56UN5 1328 aa13.69□□□□□ -0.22
HOXA4-203ENST00000511914 U2AF1L5P0DN76 240 aaPredicted RBP13.69□□□□□ -0.22
HOXA4-203ENST00000511914 HOXC9P31274 260 aa13.69□□□□□ -0.22
HOXA4-203ENST00000511914 C1QTNF8P60827 252 aa13.69□□□□□ -0.22
HOXA4-203ENST00000511914 U2AF1Q01081 240 aaKnown RBP eCLIP13.69□□□□□ -0.22
HOXA4-203ENST00000511914 NLGN2Q8NFZ4 835 aa13.69□□□□□ -0.22
HOXA4-203ENST00000511914 ZNF521Q96K83 1311 aa13.68□□□□□ -0.22
HOXA4-203ENST00000511914 CCDC27Q2M243 656 aa13.68□□□□□ -0.22
HOXA4-203ENST00000511914 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
HOXA4-203ENST00000511914 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
HOXA4-203ENST00000511914 EMILIN1Q9Y6C2 1016 aa13.68□□□□□ -0.22
HOXA4-203ENST00000511914 MAP2P11137 1827 aaKnown RBP13.67□□□□□ -0.22
HOXA4-203ENST00000511914 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
HOXA4-203ENST00000511914 APAF1O14727 1248 aa13.67□□□□□ -0.22
HOXA4-203ENST00000511914 IL13P35225 146 aa13.67□□□□□ -0.22
HOXA4-203ENST00000511914 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
HOXA4-203ENST00000511914 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
HOXA4-203ENST00000511914 PPM1GO15355 546 aaPredicted RBP13.66□□□□□ -0.22
HOXA4-203ENST00000511914 RRS1Q15050 365 aaKnown RBP13.66□□□□□ -0.22
HOXA4-203ENST00000511914 FLT4P35916 1363 aa13.66□□□□□ -0.22
HOXA4-203ENST00000511914 ITGB4P16144 1822 aa13.65□□□□□ -0.22
HOXA4-203ENST00000511914 U2SURPO15042 1029 aaKnown RBP13.65□□□□□ -0.22
HOXA4-203ENST00000511914 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
HOXA4-203ENST00000511914 PLEKHF1Q96S99 279 aa13.65□□□□□ -0.22
HOXA4-203ENST00000511914 GTF3C3Q9Y5Q9 886 aa13.65□□□□□ -0.22
HOXA4-203ENST00000511914 RTL1A6NKG5 1358 aa13.65□□□□□ -0.22
HOXA4-203ENST00000511914 GIGYF1O75420 1035 aaPredicted RBP13.64□□□□□ -0.23
HOXA4-203ENST00000511914 NEFMP07197 916 aa13.64□□□□□ -0.23
HOXA4-203ENST00000511914 GOLGA2Q08379 1002 aa13.64□□□□□ -0.23
HOXA4-203ENST00000511914 NBPF6Q5VWK0 638 aa13.64□□□□□ -0.23
HOXA4-203ENST00000511914 COL23A1Q86Y22 540 aaPredicted RBP13.64□□□□□ -0.23
HOXA4-203ENST00000511914 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
HOXA4-203ENST00000511914 NBPF4Q96M43 638 aa13.64□□□□□ -0.23
HOXA4-203ENST00000511914 TOGARAM1Q9Y4F4 1720 aa13.64□□□□□ -0.23
HOXA4-203ENST00000511914 YBX3P16989 372 aaKnown RBP eCLIP13.63□□□□□ -0.23
HOXA4-203ENST00000511914 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
HOXA4-203ENST00000511914 RSPH6AQ9H0K4 717 aa13.62□□□□□ -0.23
HOXA4-203ENST00000511914 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
HOXA4-203ENST00000511914 E9PSI1 815 aa13.61□□□□□ -0.23
HOXA4-203ENST00000511914 EIF4A2Q14240 407 aaKnown RBP13.61□□□□□ -0.23
HOXA4-203ENST00000511914 WWC1Q8IX03 1113 aa13.61□□□□□ -0.23
HOXA4-203ENST00000511914 TRMT2AQ8IZ69 625 aaKnown RBP13.61□□□□□ -0.23
HOXA4-203ENST00000511914 RAPGEF4Q8WZA2 1011 aa13.61□□□□□ -0.23
HOXA4-203ENST00000511914 C4BP0C0L5 1744 aa13.61□□□□□ -0.23
HOXA4-203ENST00000511914 NEFLP07196 543 aa13.6□□□□□ -0.23
HOXA4-203ENST00000511914 SLFN5Q08AF3 891 aa13.6□□□□□ -0.23
HOXA4-203ENST00000511914 SALL2Q9Y467 1007 aaPredicted RBP13.6□□□□□ -0.23
HOXA4-203ENST00000511914 UBR3Q6ZT12 1888 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 TATP17735 454 aaPredicted RBP13.59□□□□□ -0.23
HOXA4-203ENST00000511914 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
HOXA4-203ENST00000511914 CLCN6P51797 869 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 HSP90AB2PQ58FF8 381 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 ERICH6BQ5W0A0 696 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 MPRIPQ6WCQ1 1025 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 PKD1L3Q7Z443 1732 aa13.59□□□□□ -0.23
HOXA4-203ENST00000511914 PALLDQ8WX93 1383 aa13.58□□□□□ -0.23
HOXA4-203ENST00000511914 IL16Q14005 1332 aa13.58□□□□□ -0.24
HOXA4-203ENST00000511914 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
HOXA4-203ENST00000511914 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
HOXA4-203ENST00000511914 GRIN3BO60391 1043 aa13.57□□□□□ -0.24
HOXA4-203ENST00000511914 PRKAR2BP31323 418 aa13.57□□□□□ -0.24
HOXA4-203ENST00000511914 DUSP27Q5VZP5 1158 aa13.57□□□□□ -0.24
HOXA4-203ENST00000511914 SMIM5Q71RC9 77 aa13.57□□□□□ -0.24
HOXA4-203ENST00000511914 CDCA7LQ96GN5 454 aa13.57□□□□□ -0.24
HOXA4-203ENST00000511914 SUPT16HQ9Y5B9 1047 aaKnown RBP13.57□□□□□ -0.24
HOXA4-203ENST00000511914 KDRP35968 1356 aa13.57□□□□□ -0.24
HOXA4-203ENST00000511914 PHF14O94880 888 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms