RNA–Protein interactions for RNA: ENST00000511649.5

RAB28-207, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5

Gene RAB28, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-207ENST00000511649 KMT5BQ4FZB7 885 aa9.67□□□□□ -0.86
RAB28-207ENST00000511649 WAPLQ7Z5K2 1190 aa9.67□□□□□ -0.86
RAB28-207ENST00000511649 MPHOSPH9Q99550 1183 aa9.67□□□□□ -0.86
RAB28-207ENST00000511649 PRR14Q9BWN1 585 aa9.67□□□□□ -0.86
RAB28-207ENST00000511649 ABCA3Q99758 1704 aa9.67□□□□□ -0.86
RAB28-207ENST00000511649 ADGRB1O14514 1584 aa9.67□□□□□ -0.86
RAB28-207ENST00000511649 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
RAB28-207ENST00000511649 LRPPRCP42704 1394 aaKnown RBP9.66□□□□□ -0.86
RAB28-207ENST00000511649 TMEM132EQ6IEE7 984 aa9.66□□□□□ -0.86
RAB28-207ENST00000511649 YTHDC2Q9H6S0 1430 aaKnown RBP9.65□□□□□ -0.86
RAB28-207ENST00000511649 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.86
RAB28-207ENST00000511649 XPCQ01831 940 aaPredicted RBP9.65□□□□□ -0.86
RAB28-207ENST00000511649 RGL3Q3MIN7 710 aa9.65□□□□□ -0.86
RAB28-207ENST00000511649 MEX3CQ5U5Q3 659 aaKnown RBP9.65□□□□□ -0.86
RAB28-207ENST00000511649 RAB3GAP2Q9H2M9 1393 aa9.64□□□□□ -0.87
RAB28-207ENST00000511649 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
RAB28-207ENST00000511649 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
RAB28-207ENST00000511649 BCL9LQ86UU0 1499 aa9.64□□□□□ -0.87
RAB28-207ENST00000511649 ABCC11Q96J66 1382 aa9.63□□□□□ -0.87
RAB28-207ENST00000511649 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
RAB28-207ENST00000511649 SSTR3P32745 418 aaPredicted RBP9.63□□□□□ -0.87
RAB28-207ENST00000511649 GCGRP47871 477 aa9.63□□□□□ -0.87
RAB28-207ENST00000511649 ZNF772Q68DY9 489 aaPredicted RBP9.63□□□□□ -0.87
RAB28-207ENST00000511649 LRRC59Q96AG4 307 aaKnown RBP9.63□□□□□ -0.87
RAB28-207ENST00000511649 STK26Q9P289 416 aa9.63□□□□□ -0.87
RAB28-207ENST00000511649 ATRNO75882 1429 aa9.63□□□□□ -0.87
RAB28-207ENST00000511649 GLI3P10071 1580 aa9.63□□□□□ -0.87
RAB28-207ENST00000511649 ANKRD30BQ9BXX2 1392 aa9.63□□□□□ -0.87
RAB28-207ENST00000511649 TRPM3Q9HCF6 1732 aaPredicted RBP9.62□□□□□ -0.87
RAB28-207ENST00000511649 KIF1AQ12756 1690 aa9.62□□□□□ -0.87
RAB28-207ENST00000511649 ADGRB2O60241 1585 aa9.62□□□□□ -0.87
RAB28-207ENST00000511649 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.62□□□□□ -0.87
RAB28-207ENST00000511649 CRYBG1Q9Y4K1 1723 aa9.62□□□□□ -0.87
RAB28-207ENST00000511649 ITGBL1O95965 494 aaPredicted RBP9.61□□□□□ -0.87
RAB28-207ENST00000511649 MS4A1P11836 297 aa9.61□□□□□ -0.87
RAB28-207ENST00000511649 RXRBP28702 533 aa9.61□□□□□ -0.87
RAB28-207ENST00000511649 CFAP70Q5T0N1 1121 aa9.61□□□□□ -0.87
RAB28-207ENST00000511649 PCDHB3Q9Y5E6 796 aa9.61□□□□□ -0.87
RAB28-207ENST00000511649 FOXO3O43524 673 aa9.6□□□□□ -0.87
RAB28-207ENST00000511649 RGS20O76081 388 aa9.6□□□□□ -0.87
RAB28-207ENST00000511649 MTRQ99707 1265 aa9.6□□□□□ -0.87
RAB28-207ENST00000511649 BRWD3Q6RI45 1802 aa9.6□□□□□ -0.87
RAB28-207ENST00000511649 PLCH1Q4KWH8 1693 aa9.6□□□□□ -0.87
RAB28-207ENST00000511649 DLC1Q96QB1 1528 aa9.6□□□□□ -0.87
RAB28-207ENST00000511649 ARHGEF28Q8N1W1 1705 aaKnown RBP9.59□□□□□ -0.87
RAB28-207ENST00000511649 FUT2Q10981 343 aa9.59□□□□□ -0.87
RAB28-207ENST00000511649 ESCO1Q5FWF5 840 aa9.59□□□□□ -0.87
RAB28-207ENST00000511649 TJAP1Q5JTD0 557 aa9.59□□□□□ -0.87
RAB28-207ENST00000511649 C14orf93Q9H972 538 aaKnown RBP9.59□□□□□ -0.87
RAB28-207ENST00000511649 QTRT2Q9H974 415 aaKnown RBP9.59□□□□□ -0.87
RAB28-207ENST00000511649 SLIT2O94813 1529 aa9.59□□□□□ -0.87
RAB28-207ENST00000511649 DHX57Q6P158 1386 aaKnown RBP9.59□□□□□ -0.87
RAB28-207ENST00000511649 ALS2Q96Q42 1657 aa9.58□□□□□ -0.88
RAB28-207ENST00000511649 BLOC1S3Q6QNY0 202 aa9.58□□□□□ -0.88
RAB28-207ENST00000511649 FNBP4Q8N3X1 1017 aaPredicted RBP9.58□□□□□ -0.88
RAB28-207ENST00000511649 IL21Q9HBE4 155 aa9.58□□□□□ -0.88
RAB28-207ENST00000511649 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
RAB28-207ENST00000511649 NRAPQ86VF7 1730 aa9.58□□□□□ -0.88
RAB28-207ENST00000511649 PRR36Q9H6K5 1346 aa9.57□□□□□ -0.88
RAB28-207ENST00000511649 KDM4AO75164 1064 aa9.57□□□□□ -0.88
RAB28-207ENST00000511649 COPS2P61201 443 aa9.57□□□□□ -0.88
RAB28-207ENST00000511649 BEGAINQ9BUH8 593 aa9.57□□□□□ -0.88
RAB28-207ENST00000511649 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
RAB28-207ENST00000511649 NPHP3Q7Z494 1330 aa9.56□□□□□ -0.88
RAB28-207ENST00000511649 TNS3Q68CZ2 1445 aa9.56□□□□□ -0.88
RAB28-207ENST00000511649 RALGAPBQ86X10 1494 aa9.56□□□□□ -0.88
RAB28-207ENST00000511649 RBM6P78332 1123 aaKnown RBP9.56□□□□□ -0.88
RAB28-207ENST00000511649 SAFB2Q14151 953 aaKnown RBP eCLIP9.56□□□□□ -0.882e-6■■■□□ 16.4
RAB28-207ENST00000511649 PUS10Q3MIT2 529 aaKnown RBP9.56□□□□□ -0.88
RAB28-207ENST00000511649 KDM4CQ9H3R0 1056 aa9.56□□□□□ -0.88
RAB28-207ENST00000511649 TOPAZ1Q8N9V7 1692 aa9.55□□□□□ -0.88
RAB28-207ENST00000511649 ATP6V1AP38606 617 aa9.55□□□□□ -0.88
RAB28-207ENST00000511649 KCNC4Q03721 635 aa9.55□□□□□ -0.88
RAB28-207ENST00000511649 IFFO2Q5TF58 517 aa9.55□□□□□ -0.88
RAB28-207ENST00000511649 NGLY1Q96IV0 654 aa9.55□□□□□ -0.88
RAB28-207ENST00000511649 PRAM1Q96QH2 718 aa9.55□□□□□ -0.88
RAB28-207ENST00000511649 IRX2Q9BZI1 471 aaPredicted RBP9.55□□□□□ -0.88
RAB28-207ENST00000511649 USP21Q9UK80 565 aa9.55□□□□□ -0.88
RAB28-207ENST00000511649 USP46P62068 366 aa9.54□□□□□ -0.88
RAB28-207ENST00000511649 MORN1Q5T089 497 aa9.54□□□□□ -0.88
RAB28-207ENST00000511649 CABLES1Q8TDN4 633 aa9.54□□□□□ -0.88
RAB28-207ENST00000511649 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
RAB28-207ENST00000511649 TULP4Q9NRJ4 1543 aa9.54□□□□□ -0.88
RAB28-207ENST00000511649 NWD2Q9ULI1 1742 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 ATP7BP35670 1465 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 HOXA2O43364 376 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 ZPR1O75312 459 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
RAB28-207ENST00000511649 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 NUTM1Q86Y26 1132 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
RAB28-207ENST00000511649 HIRIP3Q9BW71 556 aaPredicted RBP9.53□□□□□ -0.88
RAB28-207ENST00000511649 NR1I2O75469 434 aa9.52□□□□□ -0.89
RAB28-207ENST00000511649 ANKARQ7Z5J8 1434 aa9.52□□□□□ -0.89
RAB28-207ENST00000511649 SPIRE2Q8WWL2 714 aa9.52□□□□□ -0.89
RAB28-207ENST00000511649 TRPC5Q9UL62 973 aaPredicted RBP9.52□□□□□ -0.89
RAB28-207ENST00000511649 KRT28Q7Z3Y7 464 aa9.51□□□□□ -0.89
RAB28-207ENST00000511649 PHRF1Q9P1Y6 1649 aaKnown RBP9.51□□□□□ -0.89
RAB28-207ENST00000511649 SBNO1A3KN83 1393 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms