RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 GNAT3A8MTJ3 354 aa29.14■■■□□ 2.26
CDS1-202ENST00000511298 PNPLA7Q6ZV29 1317 aa29.14■■■□□ 2.25
CDS1-202ENST00000511298 ZBTB7AO95365 584 aa29.13■■■□□ 2.25
CDS1-202ENST00000511298 ITPK1Q13572 414 aa29.13■■■□□ 2.25
CDS1-202ENST00000511298 IL17REQ8NFR9 667 aa29.13■■■□□ 2.25
CDS1-202ENST00000511298 SLC4A9Q96Q91 983 aa29.13■■■□□ 2.25
CDS1-202ENST00000511298 ATP6V1AP38606 617 aa29.12■■■□□ 2.25
CDS1-202ENST00000511298 MAP3K5Q99683 1374 aa29.12■■■□□ 2.25
CDS1-202ENST00000511298 LINC00116Q8NCU8 138 aa29.11■■■□□ 2.25
CDS1-202ENST00000511298 CASZ1Q86V15 1759 aa29.11■■■□□ 2.25
CDS1-202ENST00000511298 RBM42Q9BTD8 480 aaKnown RBP29.1■■■□□ 2.25
CDS1-202ENST00000511298 MTFR1LQ9H019 292 aa29.1■■■□□ 2.25
CDS1-202ENST00000511298 SLC16A10Q8TF71 515 aa29.09■■■□□ 2.25
CDS1-202ENST00000511298 PLEKHF1Q96S99 279 aa29.09■■■□□ 2.25
CDS1-202ENST00000511298 PTGER2P43116 358 aa29.08■■■□□ 2.25
CDS1-202ENST00000511298 ATF5Q9Y2D1 282 aaPredicted RBP29.08■■■□□ 2.25
CDS1-202ENST00000511298 MRC1P22897 1456 aa29.08■■■□□ 2.25
CDS1-202ENST00000511298 COL23A1Q86Y22 540 aaPredicted RBP29.07■■■□□ 2.24
CDS1-202ENST00000511298 SRCAPQ6ZRS2 3230 aa29.07■■■□□ 2.24
CDS1-202ENST00000511298 ADAMTS7Q9UKP4 1686 aa29.06■■■□□ 2.24
CDS1-202ENST00000511298 PTCD1O75127 700 aaKnown RBP29.06■■■□□ 2.24
CDS1-202ENST00000511298 SGIP1Q9BQI5 828 aa29.06■■■□□ 2.24
CDS1-202ENST00000511298 CEMIPQ8WUJ3 1361 aa29.05■■■□□ 2.24
CDS1-202ENST00000511298 FLAD1Q8NFF5 587 aa29.04■■■□□ 2.24
CDS1-202ENST00000511298 AK7Q96M32 723 aa29.04■■■□□ 2.24
CDS1-202ENST00000511298 HTATSF1O43719 755 aaKnown RBP29.03■■■□□ 2.24
CDS1-202ENST00000511298 SLC39A6Q13433 755 aa29.03■■■□□ 2.24
CDS1-202ENST00000511298 AMIGO3Q86WK7 504 aa29.03■■■□□ 2.24
CDS1-202ENST00000511298 PNNQ9H307 717 aaKnown RBP29.03■■■□□ 2.24
CDS1-202ENST00000511298 SCN11AQ9UI33 1791 aa29.03■■■□□ 2.24
CDS1-202ENST00000511298 TEFQ10587 303 aa29.02■■■□□ 2.24
CDS1-202ENST00000511298 RC3H1Q5TC82 1133 aaKnown RBP29.02■■■□□ 2.24
CDS1-202ENST00000511298 C5P01031 1676 aa29■■■□□ 2.23
CDS1-202ENST00000511298 NEFMP07197 916 aa29■■■□□ 2.23
CDS1-202ENST00000511298 C4BP0C0L5 1744 aa28.99■■■□□ 2.23
CDS1-202ENST00000511298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.98■■■□□ 2.23
CDS1-202ENST00000511298 SSFA2P28290 1259 aa28.98■■■□□ 2.23
CDS1-202ENST00000511298 SMIM5Q71RC9 77 aa28.98■■■□□ 2.23
CDS1-202ENST00000511298 RTF1Q92541 710 aaKnown RBP28.98■■■□□ 2.23
CDS1-202ENST00000511298 CNTNAP4Q9C0A0 1308 aa28.97■■■□□ 2.23
CDS1-202ENST00000511298 MCM10Q7L590 875 aa28.97■■■□□ 2.23
CDS1-202ENST00000511298 PPP1R1BQ9UD71 204 aaPredicted RBP28.97■■■□□ 2.23
CDS1-202ENST00000511298 QSER1Q2KHR3 1735 aa28.97■■■□□ 2.23
CDS1-202ENST00000511298 GNPATO15228 680 aa28.96■■■□□ 2.23
CDS1-202ENST00000511298 MSH5O43196 834 aa28.96■■■□□ 2.23
CDS1-202ENST00000511298 NFE2L2Q16236 605 aa28.96■■■□□ 2.23
CDS1-202ENST00000511298 TAF1LQ8IZX4 1826 aa28.96■■■□□ 2.23
CDS1-202ENST00000511298 ZNF831Q5JPB2 1677 aa28.96■■■□□ 2.23
CDS1-202ENST00000511298 DCTN1Q14203 1278 aa28.95■■■□□ 2.22
CDS1-202ENST00000511298 ZNF790Q6PG37 636 aa28.95■■■□□ 2.22
CDS1-202ENST00000511298 VSIG10Q8N0Z9 540 aa28.94■■■□□ 2.22
CDS1-202ENST00000511298 RPS6KA4O75676 772 aa28.93■■■□□ 2.22
CDS1-202ENST00000511298 PHF14O94880 888 aa28.93■■■□□ 2.22
CDS1-202ENST00000511298 DNAJC10Q8IXB1 793 aa28.93■■■□□ 2.22
CDS1-202ENST00000511298 MAPK8IP3Q9UPT6 1336 aa28.93■■■□□ 2.22
CDS1-202ENST00000511298 CRKLP46109 303 aaKnown RBP28.92■■■□□ 2.22
CDS1-202ENST00000511298 TTC5Q8N0Z6 440 aa28.92■■■□□ 2.22
CDS1-202ENST00000511298 RTCBQ9Y3I0 505 aaKnown RBP28.92■■■□□ 2.22
CDS1-202ENST00000511298 KCPQ6ZWJ8 1503 aa28.92■■■□□ 2.22
CDS1-202ENST00000511298 BTBD11A6QL63 1104 aa28.91■■■□□ 2.22
CDS1-202ENST00000511298 ZNF496Q96IT1 587 aaPredicted RBP28.91■■■□□ 2.22
CDS1-202ENST00000511298 ARXQ96QS3 562 aa28.91■■■□□ 2.22
CDS1-202ENST00000511298 ADAMTS8Q9UP79 889 aa28.91■■■□□ 2.22
CDS1-202ENST00000511298 TUBGCP6Q96RT7 1819 aa28.9■■■□□ 2.22
CDS1-202ENST00000511298 CYP19A1P11511 503 aaPredicted RBP28.9■■■□□ 2.22
CDS1-202ENST00000511298 WDR43Q15061 677 aaKnown RBP eCLIP28.9■■■□□ 2.22
CDS1-202ENST00000511298 INTS5Q6P9B9 1019 aaKnown RBP28.9■■■□□ 2.22
CDS1-202ENST00000511298 KCNQ3O43525 872 aa28.89■■■□□ 2.22
CDS1-202ENST00000511298 POLD1P28340 1107 aa28.89■■■□□ 2.22
CDS1-202ENST00000511298 TRAPPC3LQ5T215 181 aa28.89■■■□□ 2.22
CDS1-202ENST00000511298 ADRA2BP18089 450 aa28.88■■■□□ 2.21
CDS1-202ENST00000511298 TAF7Q15545 349 aaPredicted RBP28.87■■■□□ 2.21
CDS1-202ENST00000511298 ARHGEF1Q92888 912 aaKnown RBP28.87■■■□□ 2.21
CDS1-202ENST00000511298 MSL1Q68DK7 614 aa28.86■■■□□ 2.21
CDS1-202ENST00000511298 RUNDC1Q96C34 613 aa28.86■■■□□ 2.21
CDS1-202ENST00000511298 CICQ96RK0 1608 aaPredicted RBP28.85■■■□□ 2.21
CDS1-202ENST00000511298 TMPOP42166 694 aaKnown RBP28.85■■■□□ 2.21
CDS1-202ENST00000511298 FMNL2Q96PY5 1086 aa28.85■■■□□ 2.21
CDS1-202ENST00000511298 CCDC87Q9NVE4 849 aa28.85■■■□□ 2.21
CDS1-202ENST00000511298 HEG1Q9ULI3 1381 aa28.85■■■□□ 2.21
CDS1-202ENST00000511298 RIPK4P57078 832 aa28.84■■■□□ 2.21
CDS1-202ENST00000511298 CCDC184Q52MB2 194 aa28.84■■■□□ 2.21
CDS1-202ENST00000511298 CCDC146Q8IYE0 955 aa28.84■■■□□ 2.21
CDS1-202ENST00000511298 FHDC1Q9C0D6 1143 aaPredicted RBP28.84■■■□□ 2.21
CDS1-202ENST00000511298 UBR3Q6ZT12 1888 aa28.83■■■□□ 2.21
CDS1-202ENST00000511298 ANP32CO43423 234 aa28.83■■■□□ 2.21
CDS1-202ENST00000511298 SYT17Q9BSW7 474 aa28.83■■■□□ 2.21
CDS1-202ENST00000511298 TEX13AQ9BXU3 409 aaPredicted RBP28.83■■■□□ 2.21
CDS1-202ENST00000511298 THUMPD2Q9BTF0 503 aaKnown RBP28.82■■■□□ 2.2
CDS1-202ENST00000511298 COL5A3P25940 1745 aaPredicted RBP28.82■■■□□ 2.2
CDS1-202ENST00000511298 COL24A1Q17RW2 1714 aa28.82■■■□□ 2.2
CDS1-202ENST00000511298 TJP1Q07157 1748 aa28.81■■■□□ 2.2
CDS1-202ENST00000511298 SIPA1L3O60292 1781 aaPredicted RBP28.8■■■□□ 2.2
CDS1-202ENST00000511298 STARD3NLO95772 234 aa28.8■■■□□ 2.2
CDS1-202ENST00000511298 PNISRQ8TF01 805 aaKnown RBP28.8■■■□□ 2.2
CDS1-202ENST00000511298 SOS1Q07889 1333 aaPredicted RBP28.79■■■□□ 2.2
CDS1-202ENST00000511298 RFC4P35249 363 aa28.79■■■□□ 2.2
CDS1-202ENST00000511298 MIS18AQ9NYP9 233 aa28.79■■■□□ 2.2
CDS1-202ENST00000511298 ZBTB1Q9Y2K1 713 aa28.79■■■□□ 2.2
CDS1-202ENST00000511298 VIRMAQ69YN4 1812 aaKnown RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms