RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 ITSN1Q15811 1721 aa10.83□□□□□ -0.68
SMAD1-210ENST00000511255 PPIP5K1Q6PFW1 1433 aa10.83□□□□□ -0.68
SMAD1-210ENST00000511255 ACEP12821 1306 aa10.83□□□□□ -0.68
SMAD1-210ENST00000511255 CABLES1Q8TDN4 633 aa10.82□□□□□ -0.68
SMAD1-210ENST00000511255 TIMELESSQ9UNS1 1208 aa10.82□□□□□ -0.68
SMAD1-210ENST00000511255 COL22A1Q8NFW1 1626 aaPredicted RBP10.81□□□□□ -0.68
SMAD1-210ENST00000511255 PLEKHG3A1L390 1219 aa10.81□□□□□ -0.68
SMAD1-210ENST00000511255 FECHP22830 423 aa10.81□□□□□ -0.68
SMAD1-210ENST00000511255 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
SMAD1-210ENST00000511255 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
SMAD1-210ENST00000511255 CABP1Q9NZU7 370 aa10.81□□□□□ -0.68
SMAD1-210ENST00000511255 FAM98CQ17RN3 349 aaKnown RBP10.8□□□□□ -0.68
SMAD1-210ENST00000511255 NUTM2GQ5VZR2 741 aa10.8□□□□□ -0.68
SMAD1-210ENST00000511255 WNT2BQ93097 391 aa10.8□□□□□ -0.68
SMAD1-210ENST00000511255 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
SMAD1-210ENST00000511255 TOPAZ1Q8N9V7 1692 aa10.79□□□□□ -0.68
SMAD1-210ENST00000511255 POLR3AO14802 1390 aaPredicted RBP10.79□□□□□ -0.68
SMAD1-210ENST00000511255 ST20-MTHFSA0A0A6YYL1 179 aa10.79□□□□□ -0.68
SMAD1-210ENST00000511255 SOCS7O14512 581 aa10.79□□□□□ -0.68
SMAD1-210ENST00000511255 HIC1Q14526 733 aa10.79□□□□□ -0.68
SMAD1-210ENST00000511255 EYA1Q99502 592 aa10.79□□□□□ -0.68
SMAD1-210ENST00000511255 QTRT2Q9H974 415 aaKnown RBP10.79□□□□□ -0.68
SMAD1-210ENST00000511255 USP21Q9UK80 565 aa10.79□□□□□ -0.68
SMAD1-210ENST00000511255 ATAD2Q6PL18 1390 aa10.78□□□□□ -0.68
SMAD1-210ENST00000511255 GOLGA8CPA6NN73 597 aa10.78□□□□□ -0.68
SMAD1-210ENST00000511255 RXRBP28702 533 aa10.78□□□□□ -0.68
SMAD1-210ENST00000511255 FAM161AQ3B820 660 aa10.78□□□□□ -0.68
SMAD1-210ENST00000511255 GPIHBP1Q8IV16 184 aa10.78□□□□□ -0.68
SMAD1-210ENST00000511255 TMC1Q8TDI8 760 aa10.78□□□□□ -0.68
SMAD1-210ENST00000511255 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
SMAD1-210ENST00000511255 USP47Q96K76 1375 aa10.77□□□□□ -0.68
SMAD1-210ENST00000511255 SBNO2Q9Y2G9 1366 aa10.77□□□□□ -0.68
SMAD1-210ENST00000511255 NBPF26B4DH59 902 aa10.77□□□□□ -0.69
SMAD1-210ENST00000511255 ABTB2Q8N961 1025 aa10.77□□□□□ -0.69
SMAD1-210ENST00000511255 GNPATO15228 680 aa10.76□□□□□ -0.69
SMAD1-210ENST00000511255 TRPC5Q9UL62 973 aaPredicted RBP10.76□□□□□ -0.69
SMAD1-210ENST00000511255 ADGRG1Q9Y653 693 aa10.76□□□□□ -0.69
SMAD1-210ENST00000511255 ALS2Q96Q42 1657 aa10.76□□□□□ -0.69
SMAD1-210ENST00000511255 TULP1O00294 542 aaPredicted RBP10.75□□□□□ -0.69
SMAD1-210ENST00000511255 RBM6P78332 1123 aaKnown RBP10.75□□□□□ -0.69
SMAD1-210ENST00000511255 FNBP4Q8N3X1 1017 aaPredicted RBP10.75□□□□□ -0.69
SMAD1-210ENST00000511255 USP6P35125 1406 aa10.75□□□□□ -0.69
SMAD1-210ENST00000511255 SOWAHBA6NEL2 793 aa10.74□□□□□ -0.69
SMAD1-210ENST00000511255 BCAMP50895 628 aa10.74□□□□□ -0.69
SMAD1-210ENST00000511255 TMF1P82094 1093 aa10.74□□□□□ -0.69
SMAD1-210ENST00000511255 HDGFL2Q7Z4V5 671 aaPredicted RBP10.74□□□□□ -0.69
SMAD1-210ENST00000511255 NLRP13Q86W25 1043 aa10.74□□□□□ -0.69
SMAD1-210ENST00000511255 UNC5CLQ8IV45 518 aa10.74□□□□□ -0.69
SMAD1-210ENST00000511255 TESK2Q96S53 571 aa10.74□□□□□ -0.69
SMAD1-210ENST00000511255 PRDM11Q9NQV5 511 aa10.74□□□□□ -0.69
SMAD1-210ENST00000511255 CCDC9Q9Y3X0 531 aaKnown RBP10.74□□□□□ -0.69
SMAD1-210ENST00000511255 ABCA3Q99758 1704 aa10.73□□□□□ -0.69
SMAD1-210ENST00000511255 MARF1Q9Y4F3 1742 aaKnown RBP10.73□□□□□ -0.69
SMAD1-210ENST00000511255 ZBTB7CA1YPR0 619 aa10.73□□□□□ -0.69
SMAD1-210ENST00000511255 ZC3H6P61129 1189 aaKnown RBP10.73□□□□□ -0.69
SMAD1-210ENST00000511255 ANKK1Q8NFD2 765 aa10.73□□□□□ -0.69
SMAD1-210ENST00000511255 SLC12A5Q9H2X9 1139 aa10.73□□□□□ -0.69
SMAD1-210ENST00000511255 BRD4O60885 1362 aaPredicted RBP10.73□□□□□ -0.69
SMAD1-210ENST00000511255 KTN1Q86UP2 1357 aaKnown RBP10.73□□□□□ -0.69
SMAD1-210ENST00000511255 FAM83GA6ND36 823 aa10.72□□□□□ -0.69
SMAD1-210ENST00000511255 SAMD7Q7Z3H4 446 aa10.72□□□□□ -0.69
SMAD1-210ENST00000511255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.72□□□□□ -0.69
SMAD1-210ENST00000511255 TTC21BQ7Z4L5 1316 aa10.72□□□□□ -0.69
SMAD1-210ENST00000511255 ATRNO75882 1429 aa10.72□□□□□ -0.69
SMAD1-210ENST00000511255 BCL9LQ86UU0 1499 aa10.72□□□□□ -0.69
SMAD1-210ENST00000511255 SLIT2O94813 1529 aa10.72□□□□□ -0.69
SMAD1-210ENST00000511255 CHRNA2Q15822 529 aa10.71□□□□□ -0.69
SMAD1-210ENST00000511255 KIAA0232Q92628 1395 aa10.71□□□□□ -0.69
SMAD1-210ENST00000511255 PUS7Q96PZ0 661 aaKnown RBP10.71□□□□□ -0.69
SMAD1-210ENST00000511255 POLR3GLQ9BT43 218 aa10.71□□□□□ -0.69
SMAD1-210ENST00000511255 BTG4Q9NY30 223 aa10.71□□□□□ -0.69
SMAD1-210ENST00000511255 TERF2IPQ9NYB0 399 aa10.71□□□□□ -0.69
SMAD1-210ENST00000511255 TTC21AQ8NDW8 1320 aa10.7□□□□□ -0.7
SMAD1-210ENST00000511255 GCP02774 474 aa10.7□□□□□ -0.7
SMAD1-210ENST00000511255 EIF4G2P78344 907 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMAD1-210ENST00000511255 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
SMAD1-210ENST00000511255 Q6ZNB5 142 aa10.7□□□□□ -0.7
SMAD1-210ENST00000511255 GJD4Q96KN9 370 aaPredicted RBP10.7□□□□□ -0.7
SMAD1-210ENST00000511255 RGS12O14924 1447 aa10.69□□□□□ -0.7
SMAD1-210ENST00000511255 CPSF1Q10570 1443 aaKnown RBP10.69□□□□□ -0.7
SMAD1-210ENST00000511255 USP19O94966 1318 aa10.69□□□□□ -0.7
SMAD1-210ENST00000511255 MYT1Q01538 1121 aa10.69□□□□□ -0.7
SMAD1-210ENST00000511255 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
SMAD1-210ENST00000511255 PLCH1Q4KWH8 1693 aa10.69□□□□□ -0.7
SMAD1-210ENST00000511255 PHRF1Q9P1Y6 1649 aaKnown RBP10.69□□□□□ -0.7
SMAD1-210ENST00000511255 CDK12Q9NYV4 1490 aaPredicted RBP10.68□□□□□ -0.7
SMAD1-210ENST00000511255 SSH2Q76I76 1423 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 A0A1W2PP64 1363 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 NINLQ9Y2I6 1382 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 AKAP12Q02952 1782 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 CRYBG1Q9Y4K1 1723 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
SMAD1-210ENST00000511255 VPS72Q15906 364 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 RBM46Q8TBY0 533 aaKnown RBP10.68□□□□□ -0.7
SMAD1-210ENST00000511255 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 LRCH3Q96II8 777 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 STRN4Q9NRL3 753 aa10.68□□□□□ -0.7
SMAD1-210ENST00000511255 COL14A1Q05707 1796 aaKnown RBP10.67□□□□□ -0.7
SMAD1-210ENST00000511255 ITGBL1O95965 494 aaPredicted RBP10.67□□□□□ -0.7
SMAD1-210ENST00000511255 EVA1CP58658 441 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms