RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 LMO7Q8WWI1 1683 aa10.4□□□□□ -0.75
SMAD1-209ENST00000511125 CHL1O00533 1208 aa10.39□□□□□ -0.75
SMAD1-209ENST00000511125 CALD1Q05682 793 aaKnown RBP10.39□□□□□ -0.75
SMAD1-209ENST00000511125 SSH1Q8WYL5 1049 aa10.39□□□□□ -0.75
SMAD1-209ENST00000511125 DCAF5Q96JK2 942 aa10.39□□□□□ -0.75
SMAD1-209ENST00000511125 SLIT2O94813 1529 aa10.39□□□□□ -0.75
SMAD1-209ENST00000511125 TRMT2AQ8IZ69 625 aaKnown RBP10.39□□□□□ -0.75
SMAD1-209ENST00000511125 SLC52A2Q9HAB3 445 aa10.39□□□□□ -0.75
SMAD1-209ENST00000511125 TMOD3Q9NYL9 352 aa10.39□□□□□ -0.75
SMAD1-209ENST00000511125 COL14A1Q05707 1796 aaKnown RBP10.38□□□□□ -0.75
SMAD1-209ENST00000511125 POTEAQ6S8J7 498 aa10.38□□□□□ -0.75
SMAD1-209ENST00000511125 TTC5Q8N0Z6 440 aa10.38□□□□□ -0.75
SMAD1-209ENST00000511125 BCL11AQ9H165 835 aa10.38□□□□□ -0.75
SMAD1-209ENST00000511125 ZNF853P0CG23 659 aa10.38□□□□□ -0.75
SMAD1-209ENST00000511125 PIGBQ92521 554 aa10.38□□□□□ -0.75
SMAD1-209ENST00000511125 ZNF496Q96IT1 587 aaPredicted RBP10.38□□□□□ -0.75
SMAD1-209ENST00000511125 OVOS2A0A0G2JMS6 1433 aa10.38□□□□□ -0.75
SMAD1-209ENST00000511125 KDM6AO15550 1401 aaPredicted RBP10.38□□□□□ -0.75
SMAD1-209ENST00000511125 PANK1Q8TE04 598 aa10.38□□□□□ -0.75
SMAD1-209ENST00000511125 COL22A1Q8NFW1 1626 aaPredicted RBP10.37□□□□□ -0.75
SMAD1-209ENST00000511125 VAMP4O75379 141 aa10.37□□□□□ -0.75
SMAD1-209ENST00000511125 MYL6BP14649 208 aa10.37□□□□□ -0.75
SMAD1-209ENST00000511125 RARSP54136 660 aaKnown RBP10.37□□□□□ -0.75
SMAD1-209ENST00000511125 RGS17Q9UGC6 210 aaPredicted RBP10.37□□□□□ -0.75
SMAD1-209ENST00000511125 PLCH1Q4KWH8 1693 aa10.37□□□□□ -0.75
SMAD1-209ENST00000511125 AIMP1Q12904 312 aaKnown RBP10.37□□□□□ -0.75
SMAD1-209ENST00000511125 SMIM5Q71RC9 77 aa10.37□□□□□ -0.75
SMAD1-209ENST00000511125 SLC4A2P04920 1241 aa10.36□□□□□ -0.75
SMAD1-209ENST00000511125 ZNF790Q6PG37 636 aa10.36□□□□□ -0.75
SMAD1-209ENST00000511125 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMAD1-209ENST00000511125 NOB1Q9ULX3 412 aaKnown RBP10.36□□□□□ -0.75
SMAD1-209ENST00000511125 USP16Q9Y5T5 823 aa10.36□□□□□ -0.75
SMAD1-209ENST00000511125 FAM208AQ9UK61 1670 aaKnown RBP10.36□□□□□ -0.75
SMAD1-209ENST00000511125 HTATSF1O43719 755 aaKnown RBP10.36□□□□□ -0.75
SMAD1-209ENST00000511125 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
SMAD1-209ENST00000511125 G2E3Q7L622 706 aa10.36□□□□□ -0.75
SMAD1-209ENST00000511125 HSP90AB1P08238 724 aaKnown RBP10.35□□□□□ -0.75
SMAD1-209ENST00000511125 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
SMAD1-209ENST00000511125 HDGFL1Q5TGJ6 251 aa10.35□□□□□ -0.75
SMAD1-209ENST00000511125 RXRBP28702 533 aa10.35□□□□□ -0.75
SMAD1-209ENST00000511125 SLC4A10Q6U841 1118 aa10.35□□□□□ -0.75
SMAD1-209ENST00000511125 EXOC6Q8TAG9 804 aa10.35□□□□□ -0.75
SMAD1-209ENST00000511125 COG6Q9Y2V7 657 aa10.35□□□□□ -0.75
SMAD1-209ENST00000511125 IL16Q14005 1332 aa10.35□□□□□ -0.75
SMAD1-209ENST00000511125 F6X3S4 739 aa10.34□□□□□ -0.75
SMAD1-209ENST00000511125 THRAP3Q9Y2W1 955 aaKnown RBP10.34□□□□□ -0.75
SMAD1-209ENST00000511125 TRIM37O94972 964 aa10.34□□□□□ -0.75
SMAD1-209ENST00000511125 PROSER3Q2NL68 480 aa10.34□□□□□ -0.75
SMAD1-209ENST00000511125 BARGINQ6ZT62 677 aa10.34□□□□□ -0.75
SMAD1-209ENST00000511125 PHAXQ9H814 394 aaKnown RBP10.34□□□□□ -0.75
SMAD1-209ENST00000511125 CRBNQ96SW2 442 aa10.34□□□□□ -0.75
SMAD1-209ENST00000511125 CHPF2Q9P2E5 772 aa10.34□□□□□ -0.75
SMAD1-209ENST00000511125 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
SMAD1-209ENST00000511125 ZNF772Q68DY9 489 aaPredicted RBP10.33□□□□□ -0.76
SMAD1-209ENST00000511125 RLBP1P12271 317 aa10.33□□□□□ -0.76
SMAD1-209ENST00000511125 NCAPD2Q15021 1401 aa10.33□□□□□ -0.76
SMAD1-209ENST00000511125 A1BGP04217 495 aa10.32□□□□□ -0.76
SMAD1-209ENST00000511125 ATG3Q9NT62 314 aa10.32□□□□□ -0.76
SMAD1-209ENST00000511125 B4GALNT3Q6L9W6 998 aa10.32□□□□□ -0.76
SMAD1-209ENST00000511125 KRT27Q7Z3Y8 459 aa10.32□□□□□ -0.76
SMAD1-209ENST00000511125 RBM6P78332 1123 aaKnown RBP10.32□□□□□ -0.76
SMAD1-209ENST00000511125 DNAJC10Q8IXB1 793 aa10.32□□□□□ -0.76
SMAD1-209ENST00000511125 FTSJ3Q8IY81 847 aaKnown RBP10.32□□□□□ -0.76
SMAD1-209ENST00000511125 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
SMAD1-209ENST00000511125 STK31Q9BXU1 1019 aa10.32□□□□□ -0.76
SMAD1-209ENST00000511125 GIGYF1O75420 1035 aaPredicted RBP10.31□□□□□ -0.76
SMAD1-209ENST00000511125 DISP2A7MBM2 1401 aa10.31□□□□□ -0.76
SMAD1-209ENST00000511125 ERVV-2B6SEH9 535 aa10.31□□□□□ -0.76
SMAD1-209ENST00000511125 FKBP5Q13451 457 aaPredicted RBP10.31□□□□□ -0.76
SMAD1-209ENST00000511125 FMNL2Q96PY5 1086 aa10.31□□□□□ -0.76
SMAD1-209ENST00000511125 SRCAPQ6ZRS2 3230 aa10.3□□□□□ -0.76
SMAD1-209ENST00000511125 NKX1-1Q15270 411 aaPredicted RBP10.3□□□□□ -0.76
SMAD1-209ENST00000511125 ITPRIPQ8IWB1 547 aa10.3□□□□□ -0.76
SMAD1-209ENST00000511125 MRPL50Q8N5N7 158 aaKnown RBP10.3□□□□□ -0.76
SMAD1-209ENST00000511125 TRIM27P14373 513 aa10.3□□□□□ -0.76
SMAD1-209ENST00000511125 ATP6V1AP38606 617 aa10.3□□□□□ -0.76
SMAD1-209ENST00000511125 RTL5Q5HYW3 569 aaPredicted RBP10.3□□□□□ -0.76
SMAD1-209ENST00000511125 SLC4A9Q96Q91 983 aa10.3□□□□□ -0.76
SMAD1-209ENST00000511125 JARID2Q92833 1246 aaPredicted RBP10.29□□□□□ -0.76
SMAD1-209ENST00000511125 NRAPQ86VF7 1730 aa10.29□□□□□ -0.76
SMAD1-209ENST00000511125 CCDC30Q5VVM6 783 aa10.29□□□□□ -0.76
SMAD1-209ENST00000511125 ZKSCAN2Q63HK3 967 aa10.29□□□□□ -0.76
SMAD1-209ENST00000511125 TNS2Q63HR2 1409 aa10.29□□□□□ -0.76
SMAD1-209ENST00000511125 SNRPA1P09661 255 aaKnown RBP10.29□□□□□ -0.76
SMAD1-209ENST00000511125 C1orf115Q9H7X2 142 aa10.29□□□□□ -0.76
SMAD1-209ENST00000511125 GLI3P10071 1580 aa10.28□□□□□ -0.76
SMAD1-209ENST00000511125 ATRNO75882 1429 aa10.28□□□□□ -0.76
SMAD1-209ENST00000511125 TMEM57Q8N5G2 664 aa10.28□□□□□ -0.76
SMAD1-209ENST00000511125 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.28□□□□□ -0.76
SMAD1-209ENST00000511125 ABCC6O95255 1503 aa10.28□□□□□ -0.76
SMAD1-209ENST00000511125 NCBP3Q53F19 620 aaKnown RBP10.28□□□□□ -0.76
SMAD1-209ENST00000511125 FLIIQ13045 1269 aa10.27□□□□□ -0.77
SMAD1-209ENST00000511125 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
SMAD1-209ENST00000511125 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
SMAD1-209ENST00000511125 GOLGB1Q14789 3259 aaKnown RBP10.27□□□□□ -0.77
SMAD1-209ENST00000511125 FAM177BA6PVY3 158 aa10.27□□□□□ -0.77
SMAD1-209ENST00000511125 ATF7IPQ6VMQ6 1270 aa10.27□□□□□ -0.77
SMAD1-209ENST00000511125 COPS6Q7L5N1 327 aa10.27□□□□□ -0.77
SMAD1-209ENST00000511125 PI4KAP2A4QPH2 592 aa10.26□□□□□ -0.77
SMAD1-209ENST00000511125 PI4KAP1Q8N8J0 262 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms