RNA–Protein interactions for RNA: ENST00000510836.5

TUSC3-210, Transcript of tumor suppressor candidate 3, human

TSL 5

Gene TUSC3, Length 1,452 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-210	ENST00000510836	HTATSF1	O43719	755 aa	Known RBP	33.41	■■■□□ 2.94
TUSC3-210	ENST00000510836	NFE2L2	Q16236	605 aa		33.41	■■■□□ 2.94
TUSC3-210	ENST00000510836	TAF1L	Q8IZX4	1826 aa		33.41	■■■□□ 2.94
TUSC3-210	ENST00000510836	NEFM	P07197	916 aa		33.4	■■■□□ 2.94
TUSC3-210	ENST00000510836	MRS2	Q9HD23	443 aa		33.4	■■■□□ 2.94
TUSC3-210	ENST00000510836	MAPK8IP3	Q9UPT6	1336 aa		33.39	■■■□□ 2.94
TUSC3-210	ENST00000510836	ZNF831	Q5JPB2	1677 aa		33.39	■■■□□ 2.94
TUSC3-210	ENST00000510836	RUNDC1	Q96C34	613 aa		33.38	■■■□□ 2.93
TUSC3-210	ENST00000510836	CCDC146	Q8IYE0	955 aa		33.37	■■■□□ 2.93
TUSC3-210	ENST00000510836	ANO8	Q9HCE9	1232 aa	Predicted RBP	33.35	■■■□□ 2.93
TUSC3-210	ENST00000510836	TMPO	P42166	694 aa	Known RBP	33.34	■■■□□ 2.93
TUSC3-210	ENST00000510836	KCNQ4	P56696	695 aa		33.34	■■■□□ 2.93
TUSC3-210	ENST00000510836	CCNL1	Q9UK58	526 aa	Predicted RBP	33.34	■■■□□ 2.93
TUSC3-210	ENST00000510836	C5	P01031	1676 aa		33.33	■■■□□ 2.93
TUSC3-210	ENST00000510836	UBR2	Q8IWV8	1755 aa		33.33	■■■□□ 2.93
TUSC3-210	ENST00000510836	DCTN1	Q14203	1278 aa		33.32	■■■□□ 2.92
TUSC3-210	ENST00000510836	MCM10	Q7L590	875 aa		33.32	■■■□□ 2.92
TUSC3-210	ENST00000510836	LOC102724428	A0A0B4J2F2	783 aa		33.31	■■■□□ 2.92
TUSC3-210	ENST00000510836	SIK1	P57059	783 aa		33.31	■■■□□ 2.92
TUSC3-210	ENST00000510836	RTF1	Q92541	710 aa	Known RBP	33.31	■■■□□ 2.92
TUSC3-210	ENST00000510836	SLC4A9	Q96Q91	983 aa		33.31	■■■□□ 2.92
TUSC3-210	ENST00000510836	NBPF14	Q5TI25	921 aa		33.31	■■■□□ 2.92
TUSC3-210	ENST00000510836	DIEXF	Q68CQ4	756 aa	Known RBP	33.31	■■■□□ 2.92
TUSC3-210	ENST00000510836	CIC	Q96RK0	1608 aa	Predicted RBP	33.3	■■■□□ 2.92
TUSC3-210	ENST00000510836	TEF	Q10587	303 aa		33.3	■■■□□ 2.92
TUSC3-210	ENST00000510836	RIPK4	P57078	832 aa		33.28	■■■□□ 2.92
TUSC3-210	ENST00000510836	AKT1S1	Q96B36	256 aa		33.28	■■■□□ 2.92
TUSC3-210	ENST00000510836	KCP	Q6ZWJ8	1503 aa		33.27	■■■□□ 2.92
TUSC3-210	ENST00000510836	SLC39A6	Q13433	755 aa		33.26	■■■□□ 2.92
TUSC3-210	ENST00000510836	SLC15A2	Q16348	729 aa		33.26	■■■□□ 2.92
TUSC3-210	ENST00000510836	COL5A3	P25940	1745 aa	Predicted RBP	33.26	■■■□□ 2.92
TUSC3-210	ENST00000510836	QSER1	Q2KHR3	1735 aa		33.26	■■■□□ 2.92
TUSC3-210	ENST00000510836	R3HDM1	Q15032	1099 aa	Known RBP	33.25	■■■□□ 2.91
TUSC3-210	ENST00000510836	TUBGCP6	Q96RT7	1819 aa		33.25	■■■□□ 2.91
TUSC3-210	ENST00000510836	ITPK1	Q13572	414 aa		33.25	■■■□□ 2.91
TUSC3-210	ENST00000510836	ZNF827	Q17R98	1081 aa		33.25	■■■□□ 2.91
TUSC3-210	ENST00000510836	RRP7A	Q9Y3A4	280 aa	Known RBP	33.24	■■■□□ 2.91
TUSC3-210	ENST00000510836	C4B	P0C0L5	1744 aa		33.24	■■■□□ 2.91
TUSC3-210	ENST00000510836	TJP1	Q07157	1748 aa		33.24	■■■□□ 2.91
TUSC3-210	ENST00000510836	PSD	A5PKW4	1024 aa	Predicted RBP	33.23	■■■□□ 2.91
TUSC3-210	ENST00000510836	TRIM35	Q9UPQ4	493 aa		33.23	■■■□□ 2.91
TUSC3-210	ENST00000510836	CCER2	I3L3R5	266 aa		33.22	■■■□□ 2.91
TUSC3-210	ENST00000510836	APAF1	O14727	1248 aa		33.22	■■■□□ 2.91
TUSC3-210	ENST00000510836	ATP6V1A	P38606	617 aa		33.22	■■■□□ 2.91
TUSC3-210	ENST00000510836	STK32B	Q9NY57	414 aa		33.22	■■■□□ 2.91
TUSC3-210	ENST00000510836	PTCD1	O75127	700 aa	Known RBP	33.21	■■■□□ 2.91
TUSC3-210	ENST00000510836	ZNF790	Q6PG37	636 aa		33.21	■■■□□ 2.91
TUSC3-210	ENST00000510836	RBM42	Q9BTD8	480 aa	Known RBP	33.21	■■■□□ 2.91
TUSC3-210	ENST00000510836	THUMPD2	Q9BTF0	503 aa	Known RBP	33.21	■■■□□ 2.91
TUSC3-210	ENST00000510836	MYH14	Q7Z406	1995 aa	Known RBP	33.2	■■■□□ 2.91
TUSC3-210	ENST00000510836	HMGB2	P26583	209 aa	Known RBP	33.2	■■■□□ 2.91
TUSC3-210	ENST00000510836	CASZ1	Q86V15	1759 aa		33.2	■■■□□ 2.91
TUSC3-210	ENST00000510836	KDM3B	Q7LBC6	1761 aa		33.19	■■■□□ 2.9
TUSC3-210	ENST00000510836	SRCAP	Q6ZRS2	3230 aa		33.19	■■■□□ 2.9
TUSC3-210	ENST00000510836	TAF7	Q15545	349 aa	Predicted RBP	33.19	■■■□□ 2.9
TUSC3-210	ENST00000510836	LINC00116	Q8NCU8	138 aa		33.19	■■■□□ 2.9
TUSC3-210	ENST00000510836	BTBD11	A6QL63	1104 aa		33.18	■■■□□ 2.9
TUSC3-210	ENST00000510836	LMOD3	Q0VAK6	560 aa		33.18	■■■□□ 2.9
TUSC3-210	ENST00000510836	UBR3	Q6ZT12	1888 aa		33.18	■■■□□ 2.9
TUSC3-210	ENST00000510836	NEUROD2	Q15784	382 aa		33.18	■■■□□ 2.9
TUSC3-210	ENST00000510836	KCNQ3	O43525	872 aa		33.16	■■■□□ 2.9
TUSC3-210	ENST00000510836	VSIG10	Q8N0Z9	540 aa		33.16	■■■□□ 2.9
TUSC3-210	ENST00000510836	ZNF496	Q96IT1	587 aa	Predicted RBP	33.15	■■■□□ 2.9
TUSC3-210	ENST00000510836	TTC5	Q8N0Z6	440 aa		33.13	■■■□□ 2.89
TUSC3-210	ENST00000510836	FAM9B	Q8IZU0	186 aa		33.12	■■■□□ 2.89
TUSC3-210	ENST00000510836	MIER1	Q8N108	512 aa		33.12	■■■□□ 2.89
TUSC3-210	ENST00000510836	PDGFD	Q9GZP0	370 aa	Predicted RBP	33.12	■■■□□ 2.89
TUSC3-210	ENST00000510836	NCBP3	Q53F19	620 aa	Known RBP	33.12	■■■□□ 2.89
TUSC3-210	ENST00000510836	HEG1	Q9ULI3	1381 aa		33.11	■■■□□ 2.89
TUSC3-210	ENST00000510836	MIS18A	Q9NYP9	233 aa		33.11	■■■□□ 2.89
TUSC3-210	ENST00000510836	PNPLA7	Q6ZV29	1317 aa		33.11	■■■□□ 2.89
TUSC3-210	ENST00000510836	RC3H1	Q5TC82	1133 aa	Known RBP	33.1	■■■□□ 2.89
TUSC3-210	ENST00000510836	AMIGO3	Q86WK7	504 aa		33.1	■■■□□ 2.89
TUSC3-210	ENST00000510836	CNTNAP4	Q9C0A0	1308 aa		33.1	■■■□□ 2.89
TUSC3-210	ENST00000510836	DNAJC10	Q8IXB1	793 aa		33.08	■■■□□ 2.89
TUSC3-210	ENST00000510836	FMNL2	Q96PY5	1086 aa		33.08	■■■□□ 2.89
TUSC3-210	ENST00000510836	BABAM1	Q9NWV8	329 aa		33.08	■■■□□ 2.89
TUSC3-210	ENST00000510836	TFCP2L1	Q9NZI6	479 aa		33.08	■■■□□ 2.89
TUSC3-210	ENST00000510836	CCDC27	Q2M243	656 aa		33.06	■■■□□ 2.88
TUSC3-210	ENST00000510836	CYP19A1	P11511	503 aa	Predicted RBP	33.05	■■■□□ 2.88
TUSC3-210	ENST00000510836	AK7	Q96M32	723 aa		33.05	■■■□□ 2.88
TUSC3-210	ENST00000510836	CHL1	O00533	1208 aa		33.03	■■■□□ 2.88
TUSC3-210	ENST00000510836	CRKL	P46109	303 aa	Known RBP	33.03	■■■□□ 2.88
TUSC3-210	ENST00000510836	INTS5	Q6P9B9	1019 aa	Known RBP	33.03	■■■□□ 2.88
TUSC3-210	ENST00000510836	COL24A1	Q17RW2	1714 aa		33.03	■■■□□ 2.88
TUSC3-210	ENST00000510836	COL23A1	Q86Y22	540 aa	Predicted RBP	33.02	■■■□□ 2.88
TUSC3-210	ENST00000510836	EIF4A1	P60842	406 aa	Known RBP	33.01	■■■□□ 2.88
TUSC3-210	ENST00000510836	ZNF853	P0CG23	659 aa		33	■■■□□ 2.87
TUSC3-210	ENST00000510836	SSFA2	P28290	1259 aa		33	■■■□□ 2.87
TUSC3-210	ENST00000510836	TEX13A	Q9BXU3	409 aa	Predicted RBP	33	■■■□□ 2.87
TUSC3-210	ENST00000510836	GNPAT	O15228	680 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	RPS6KA4	O75676	772 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	SMIM5	Q71RC9	77 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	FLAD1	Q8NFF5	587 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	TSPYL4	Q9UJ04	414 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	LRP5	O75197	1615 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	WWC1	Q8IX03	1113 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	CFAP44	Q96MT7	982 aa		32.99	■■■□□ 2.87
TUSC3-210	ENST00000510836	SENP3-EIF4A1	A0A087X0R7	540 aa		32.98	■■■□□ 2.87
TUSC3-210	ENST00000510836	PRAMEF22	A3QJZ6	481 aa		32.98	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms