RNA–Protein interactions for RNA: ENST00000510224.5

PROM1-210, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PROM1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-210ENST00000510224 AKT1S1Q96B36 256 aa10.56□□□□□ -0.72
PROM1-210ENST00000510224 DCAF5Q96JK2 942 aa10.56□□□□□ -0.72
PROM1-210ENST00000510224 PTGER2P43116 358 aa10.56□□□□□ -0.72
PROM1-210ENST00000510224 FAM9BQ8IZU0 186 aa10.56□□□□□ -0.72
PROM1-210ENST00000510224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.56□□□□□ -0.72
PROM1-210ENST00000510224 SLC39A6Q13433 755 aa10.55□□□□□ -0.72
PROM1-210ENST00000510224 NUP188Q5SRE5 1749 aa10.55□□□□□ -0.72
PROM1-210ENST00000510224 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
PROM1-210ENST00000510224 WNK3Q9BYP7 1800 aa10.55□□□□□ -0.72
PROM1-210ENST00000510224 ATG3Q9NT62 314 aa10.55□□□□□ -0.72
PROM1-210ENST00000510224 LGR6Q9HBX8 967 aa10.55□□□□□ -0.72
PROM1-210ENST00000510224 NPC1L1Q9UHC9 1359 aa10.55□□□□□ -0.72
PROM1-210ENST00000510224 USP54Q70EL1 1684 aa10.54□□□□□ -0.72
PROM1-210ENST00000510224 DOT1LQ8TEK3 1739 aa10.54□□□□□ -0.72
PROM1-210ENST00000510224 TEFQ10587 303 aa10.54□□□□□ -0.72
PROM1-210ENST00000510224 ITPK1Q13572 414 aa10.54□□□□□ -0.72
PROM1-210ENST00000510224 LINC00116Q8NCU8 138 aa10.54□□□□□ -0.72
PROM1-210ENST00000510224 RRP7AQ9Y3A4 280 aaKnown RBP10.54□□□□□ -0.72
PROM1-210ENST00000510224 SLC16A10Q8TF71 515 aa10.53□□□□□ -0.72
PROM1-210ENST00000510224 RTCBQ9Y3I0 505 aaKnown RBP10.53□□□□□ -0.72
PROM1-210ENST00000510224 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
PROM1-210ENST00000510224 MTHFSDQ2M296 383 aaKnown RBP10.53□□□□□ -0.72
PROM1-210ENST00000510224 NPM2Q86SE8 214 aaKnown RBP10.53□□□□□ -0.72
PROM1-210ENST00000510224 CCDC184Q52MB2 194 aa10.53□□□□□ -0.72
PROM1-210ENST00000510224 NHSQ6T4R5 1651 aa10.53□□□□□ -0.72
PROM1-210ENST00000510224 RFC4P35249 363 aa10.52□□□□□ -0.72
PROM1-210ENST00000510224 NKX1-1Q15270 411 aaPredicted RBP10.52□□□□□ -0.72
PROM1-210ENST00000510224 AMIGO3Q86WK7 504 aa10.52□□□□□ -0.72
PROM1-210ENST00000510224 ERVV-2B6SEH9 535 aa10.52□□□□□ -0.73
PROM1-210ENST00000510224 TRAPPC3LQ5T215 181 aa10.52□□□□□ -0.73
PROM1-210ENST00000510224 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
PROM1-210ENST00000510224 NLGN2Q8NFZ4 835 aa10.52□□□□□ -0.73
PROM1-210ENST00000510224 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.73
PROM1-210ENST00000510224 RREB1Q92766 1687 aa10.52□□□□□ -0.73
PROM1-210ENST00000510224 FLAD1Q8NFF5 587 aa10.51□□□□□ -0.73
PROM1-210ENST00000510224 PHACTR3Q96KR7 559 aa10.51□□□□□ -0.73
PROM1-210ENST00000510224 AKAP4Q5JQC9 854 aa10.5□□□□□ -0.73
PROM1-210ENST00000510224 CANXP27824 592 aaKnown RBP10.5□□□□□ -0.73
PROM1-210ENST00000510224 DCTN1Q14203 1278 aa10.5□□□□□ -0.73
PROM1-210ENST00000510224 ADAMTS8Q9UP79 889 aa10.5□□□□□ -0.73
PROM1-210ENST00000510224 LAS1LQ9Y4W2 734 aaKnown RBP10.5□□□□□ -0.73
PROM1-210ENST00000510224 HMGB2P26583 209 aaKnown RBP10.49□□□□□ -0.73
PROM1-210ENST00000510224 DNAJC10Q8IXB1 793 aa10.49□□□□□ -0.73
PROM1-210ENST00000510224 MMP10P09238 476 aa10.49□□□□□ -0.73
PROM1-210ENST00000510224 NPHP1O15259 732 aa10.49□□□□□ -0.73
PROM1-210ENST00000510224 RNMTO43148 476 aaKnown RBP10.49□□□□□ -0.73
PROM1-210ENST00000510224 SLC4A9Q96Q91 983 aa10.49□□□□□ -0.73
PROM1-210ENST00000510224 BICDL1Q6ZP65 573 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 FCHSD2O94868 740 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 MCM10Q7L590 875 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 GAS2L2Q8NHY3 880 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 SLC52A2Q9HAB3 445 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 LRP5O75197 1615 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 GNAT3A8MTJ3 354 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 CRKLP46109 303 aaKnown RBP10.48□□□□□ -0.73
PROM1-210ENST00000510224 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
PROM1-210ENST00000510224 SGIP1Q9BQI5 828 aa10.48□□□□□ -0.73
PROM1-210ENST00000510224 SRP68Q9UHB9 627 aaKnown RBP10.48□□□□□ -0.73
PROM1-210ENST00000510224 MIER1Q8N108 512 aa10.47□□□□□ -0.73
PROM1-210ENST00000510224 ZNF526Q8TF50 670 aaPredicted RBP10.47□□□□□ -0.73
PROM1-210ENST00000510224 THUMPD2Q9BTF0 503 aaKnown RBP10.47□□□□□ -0.73
PROM1-210ENST00000510224 PNNQ9H307 717 aaKnown RBP10.47□□□□□ -0.73
PROM1-210ENST00000510224 RSPH6AQ9H0K4 717 aa10.47□□□□□ -0.73
PROM1-210ENST00000510224 ZPR1O75312 459 aa10.47□□□□□ -0.73
PROM1-210ENST00000510224 SSFA2P28290 1259 aa10.47□□□□□ -0.73
PROM1-210ENST00000510224 KDM6AO15550 1401 aaPredicted RBP10.46□□□□□ -0.73
PROM1-210ENST00000510224 PIP4K2AP48426 406 aaPredicted RBP10.46□□□□□ -0.73
PROM1-210ENST00000510224 RIPK4P57078 832 aa10.46□□□□□ -0.73
PROM1-210ENST00000510224 MIS18AQ9NYP9 233 aa10.46□□□□□ -0.74
PROM1-210ENST00000510224 ANKRD26Q9UPS8 1709 aa10.46□□□□□ -0.74
PROM1-210ENST00000510224 APAF1O14727 1248 aa10.45□□□□□ -0.74
PROM1-210ENST00000510224 NGEFQ8N5V2 710 aa10.45□□□□□ -0.74
PROM1-210ENST00000510224 PARP3Q9Y6F1 533 aa10.45□□□□□ -0.74
PROM1-210ENST00000510224 BCS1LQ9Y276 419 aa10.45□□□□□ -0.74
PROM1-210ENST00000510224 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 BTBD11A6QL63 1104 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 NLGN1Q8N2Q7 840 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 IL17REQ8NFR9 667 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 RPS6KA4O75676 772 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 CCDC87Q9NVE4 849 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 ITGB4P16144 1822 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 KDRP35968 1356 aa10.44□□□□□ -0.74
PROM1-210ENST00000510224 A0A0G2JLW4 131 aa10.43□□□□□ -0.74
PROM1-210ENST00000510224 ZNF496Q96IT1 587 aaPredicted RBP10.43□□□□□ -0.74
PROM1-210ENST00000510224 ZBTB1Q9Y2K1 713 aa10.43□□□□□ -0.74
PROM1-210ENST00000510224 STARD3NLO95772 234 aa10.43□□□□□ -0.74
PROM1-210ENST00000510224 TBC1D2BQ9UPU7 963 aa10.43□□□□□ -0.74
PROM1-210ENST00000510224 KCNQ3O43525 872 aa10.43□□□□□ -0.74
PROM1-210ENST00000510224 USPL1Q5W0Q7 1092 aa10.43□□□□□ -0.74
PROM1-210ENST00000510224 CCDC24Q8N4L8 307 aa10.43□□□□□ -0.74
PROM1-210ENST00000510224 FAM177BA6PVY3 158 aa10.42□□□□□ -0.74
PROM1-210ENST00000510224 FKBP8Q14318 412 aa10.42□□□□□ -0.74
PROM1-210ENST00000510224 RUNDC1Q96C34 613 aa10.42□□□□□ -0.74
PROM1-210ENST00000510224 RGPD3A6NKT7 1758 aaPredicted RBP10.42□□□□□ -0.74
PROM1-210ENST00000510224 RGPD4Q7Z3J3 1758 aa10.42□□□□□ -0.74
PROM1-210ENST00000510224 MAP3K5Q99683 1374 aa10.42□□□□□ -0.74
PROM1-210ENST00000510224 NCAPD2Q15021 1401 aa10.42□□□□□ -0.74
PROM1-210ENST00000510224 YBX3P16989 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
PROM1-210ENST00000510224 ZNF790Q6PG37 636 aa10.42□□□□□ -0.74
PROM1-210ENST00000510224 NFE2L2Q16236 605 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms