RNA–Protein interactions for RNA: ENST00000509692.5

SKP2-205, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-205ENST00000509692 VIRMAQ69YN4 1812 aaKnown RBP21.75■■□□□ 1.07
SKP2-205ENST00000509692 ADAMTS8Q9UP79 889 aa21.74■■□□□ 1.07
SKP2-205ENST00000509692 TUBGCP6Q96RT7 1819 aa21.73■■□□□ 1.07
SKP2-205ENST00000509692 CABP4P57796 275 aa21.73■■□□□ 1.07
SKP2-205ENST00000509692 LGR6Q9HBX8 967 aa21.73■■□□□ 1.07
SKP2-205ENST00000509692 C5P01031 1676 aa21.73■■□□□ 1.07
SKP2-205ENST00000509692 PNNQ9H307 717 aaKnown RBP21.73■■□□□ 1.07
SKP2-205ENST00000509692 NFATC2IPQ8NCF5 419 aa21.72■■□□□ 1.07
SKP2-205ENST00000509692 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
SKP2-205ENST00000509692 ZBTB7AO95365 584 aa21.71■■□□□ 1.07
SKP2-205ENST00000509692 SIK1P57059 783 aa21.71■■□□□ 1.07
SKP2-205ENST00000509692 PHACTR3Q96KR7 559 aa21.71■■□□□ 1.07
SKP2-205ENST00000509692 QSER1Q2KHR3 1735 aa21.71■■□□□ 1.07
SKP2-205ENST00000509692 PLEKHF1Q96S99 279 aa21.7■■□□□ 1.06
SKP2-205ENST00000509692 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
SKP2-205ENST00000509692 SPON1Q9HCB6 807 aa21.69■■□□□ 1.06
SKP2-205ENST00000509692 TFCP2L1Q9NZI6 479 aa21.69■■□□□ 1.06
SKP2-205ENST00000509692 ADAMTS7Q9UKP4 1686 aa21.69■■□□□ 1.06
SKP2-205ENST00000509692 PNPLA7Q6ZV29 1317 aa21.69■■□□□ 1.06
SKP2-205ENST00000509692 NEFMP07197 916 aa21.69■■□□□ 1.06
SKP2-205ENST00000509692 CCDC146Q8IYE0 955 aa21.68■■□□□ 1.06
SKP2-205ENST00000509692 FAM9BQ8IZU0 186 aa21.68■■□□□ 1.06
SKP2-205ENST00000509692 C4BP0C0L5 1744 aa21.67■■□□□ 1.06
SKP2-205ENST00000509692 ITPK1Q13572 414 aa21.67■■□□□ 1.06
SKP2-205ENST00000509692 GAS2L2Q8NHY3 880 aa21.67■■□□□ 1.06
SKP2-205ENST00000509692 SLC4A9Q96Q91 983 aa21.67■■□□□ 1.06
SKP2-205ENST00000509692 SLC52A2Q9HAB3 445 aa21.67■■□□□ 1.06
SKP2-205ENST00000509692 ATF5Q9Y2D1 282 aaPredicted RBP21.67■■□□□ 1.06
SKP2-205ENST00000509692 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
SKP2-205ENST00000509692 LINC00116Q8NCU8 138 aa21.66■■□□□ 1.06
SKP2-205ENST00000509692 MRC1P22897 1456 aa21.66■■□□□ 1.06
SKP2-205ENST00000509692 ATP6V1AP38606 617 aa21.66■■□□□ 1.06
SKP2-205ENST00000509692 RUNDC1Q96C34 613 aa21.66■■□□□ 1.06
SKP2-205ENST00000509692 RBM42Q9BTD8 480 aaKnown RBP21.65■■□□□ 1.06
SKP2-205ENST00000509692 MTFR1LQ9H019 292 aa21.65■■□□□ 1.06
SKP2-205ENST00000509692 MAP3K5Q99683 1374 aa21.64■■□□□ 1.06
SKP2-205ENST00000509692 GNAT3A8MTJ3 354 aa21.64■■□□□ 1.05
SKP2-205ENST00000509692 PTGER2P43116 358 aa21.64■■□□□ 1.05
SKP2-205ENST00000509692 AMIGO3Q86WK7 504 aa21.64■■□□□ 1.05
SKP2-205ENST00000509692 IL17REQ8NFR9 667 aa21.64■■□□□ 1.05
SKP2-205ENST00000509692 DLG5Q8TDM6 1919 aa21.63■■□□□ 1.05
SKP2-205ENST00000509692 ZNF831Q5JPB2 1677 aa21.63■■□□□ 1.05
SKP2-205ENST00000509692 UBR3Q6ZT12 1888 aa21.62■■□□□ 1.05
SKP2-205ENST00000509692 PTCD1O75127 700 aaKnown RBP21.62■■□□□ 1.05
SKP2-205ENST00000509692 HMGB2P26583 209 aaKnown RBP21.62■■□□□ 1.05
SKP2-205ENST00000509692 COL23A1Q86Y22 540 aaPredicted RBP21.62■■□□□ 1.05
SKP2-205ENST00000509692 SGIP1Q9BQI5 828 aa21.62■■□□□ 1.05
SKP2-205ENST00000509692 SMIM5Q71RC9 77 aa21.61■■□□□ 1.05
SKP2-205ENST00000509692 AK7Q96M32 723 aa21.61■■□□□ 1.05
SKP2-205ENST00000509692 SLC39A6Q13433 755 aa21.6■■□□□ 1.05
SKP2-205ENST00000509692 NFE2L2Q16236 605 aa21.6■■□□□ 1.05
SKP2-205ENST00000509692 SLC16A10Q8TF71 515 aa21.6■■□□□ 1.05
SKP2-205ENST00000509692 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
SKP2-205ENST00000509692 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
SKP2-205ENST00000509692 PPP1R1BQ9UD71 204 aaPredicted RBP21.58■■□□□ 1.05
SKP2-205ENST00000509692 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.05
SKP2-205ENST00000509692 MSH5O43196 834 aa21.58■■□□□ 1.04
SKP2-205ENST00000509692 TMPOP42166 694 aaKnown RBP21.58■■□□□ 1.04
SKP2-205ENST00000509692 COL24A1Q17RW2 1714 aa21.57■■□□□ 1.04
SKP2-205ENST00000509692 MYH14Q7Z406 1995 aaKnown RBP21.57■■□□□ 1.04
SKP2-205ENST00000509692 APAF1O14727 1248 aa21.57■■□□□ 1.04
SKP2-205ENST00000509692 TJP1Q07157 1748 aa21.56■■□□□ 1.04
SKP2-205ENST00000509692 PHF14O94880 888 aa21.56■■□□□ 1.04
SKP2-205ENST00000509692 RRP7AQ9Y3A4 280 aaKnown RBP21.56■■□□□ 1.04
SKP2-205ENST00000509692 GOLGB1Q14789 3259 aaKnown RBP21.56■■□□□ 1.04
SKP2-205ENST00000509692 KCPQ6ZWJ8 1503 aa21.56■■□□□ 1.04
SKP2-205ENST00000509692 UTRNP46939 3433 aa21.56■■□□□ 1.04
SKP2-205ENST00000509692 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.55■■□□□ 1.04
SKP2-205ENST00000509692 GNPATO15228 680 aa21.55■■□□□ 1.04
SKP2-205ENST00000509692 RIPK4P57078 832 aa21.55■■□□□ 1.04
SKP2-205ENST00000509692 TEFQ10587 303 aa21.55■■□□□ 1.04
SKP2-205ENST00000509692 FLAD1Q8NFF5 587 aa21.55■■□□□ 1.04
SKP2-205ENST00000509692 NEUROD2Q15784 382 aa21.55■■□□□ 1.04
SKP2-205ENST00000509692 UBR2Q8IWV8 1755 aa21.54■■□□□ 1.04
SKP2-205ENST00000509692 CICQ96RK0 1608 aaPredicted RBP21.54■■□□□ 1.04
SKP2-205ENST00000509692 SSFA2P28290 1259 aa21.54■■□□□ 1.04
SKP2-205ENST00000509692 DCTN1Q14203 1278 aa21.54■■□□□ 1.04
SKP2-205ENST00000509692 MCM10Q7L590 875 aa21.54■■□□□ 1.04
SKP2-205ENST00000509692 RTF1Q92541 710 aaKnown RBP21.54■■□□□ 1.04
SKP2-205ENST00000509692 HTATSF1O43719 755 aaKnown RBP21.53■■□□□ 1.04
SKP2-205ENST00000509692 RC3H1Q5TC82 1133 aaKnown RBP21.53■■□□□ 1.04
SKP2-205ENST00000509692 CNTNAP4Q9C0A0 1308 aa21.53■■□□□ 1.04
SKP2-205ENST00000509692 MSL1Q68DK7 614 aa21.51■■□□□ 1.03
SKP2-205ENST00000509692 DNAJC10Q8IXB1 793 aa21.51■■□□□ 1.03
SKP2-205ENST00000509692 ARXQ96QS3 562 aa21.51■■□□□ 1.03
SKP2-205ENST00000509692 SENP3-EIF4A1A0A087X0R7 540 aa21.51■■□□□ 1.03
SKP2-205ENST00000509692 LMOD3Q0VAK6 560 aa21.51■■□□□ 1.03
SKP2-205ENST00000509692 ZNF790Q6PG37 636 aa21.51■■□□□ 1.03
SKP2-205ENST00000509692 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
SKP2-205ENST00000509692 RTCBQ9Y3I0 505 aaKnown RBP21.5■■□□□ 1.03
SKP2-205ENST00000509692 TTC5Q8N0Z6 440 aa21.49■■□□□ 1.03
SKP2-205ENST00000509692 BTBD11A6QL63 1104 aa21.48■■□□□ 1.03
SKP2-205ENST00000509692 KCNQ3O43525 872 aa21.48■■□□□ 1.03
SKP2-205ENST00000509692 RPS6KA4O75676 772 aa21.48■■□□□ 1.03
SKP2-205ENST00000509692 POLD1P28340 1107 aa21.48■■□□□ 1.03
SKP2-205ENST00000509692 INTS5Q6P9B9 1019 aaKnown RBP21.48■■□□□ 1.03
SKP2-205ENST00000509692 ZNF496Q96IT1 587 aaPredicted RBP21.48■■□□□ 1.03
SKP2-205ENST00000509692 FHDC1Q9C0D6 1143 aaPredicted RBP21.48■■□□□ 1.03
SKP2-205ENST00000509692 TRIM35Q9UPQ4 493 aa21.48■■□□□ 1.03
SKP2-205ENST00000509692 TRAPPC3LQ5T215 181 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms