RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 DOT1LQ8TEK3 1739 aa9.95□□□□□ -0.82
TOPBP1-207ENST00000509162 SRCAPQ6ZRS2 3230 aa9.94□□□□□ -0.82
TOPBP1-207ENST00000509162 NUP188Q5SRE5 1749 aa9.94□□□□□ -0.82
TOPBP1-207ENST00000509162 NPC1L1Q9UHC9 1359 aa9.94□□□□□ -0.82
TOPBP1-207ENST00000509162 PSEN1P49768 467 aa9.94□□□□□ -0.82
TOPBP1-207ENST00000509162 PDAP1Q13442 181 aaKnown RBP9.94□□□□□ -0.82
TOPBP1-207ENST00000509162 PTF1AQ7RTS3 328 aa9.94□□□□□ -0.82
TOPBP1-207ENST00000509162 USHBP1Q8N6Y0 703 aa9.94□□□□□ -0.82
TOPBP1-207ENST00000509162 TNNT2P45379 298 aaPredicted RBP9.93□□□□□ -0.82
TOPBP1-207ENST00000509162 NKX1-1Q15270 411 aaPredicted RBP9.93□□□□□ -0.82
TOPBP1-207ENST00000509162 NBPF6Q5VWK0 638 aa9.93□□□□□ -0.82
TOPBP1-207ENST00000509162 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
TOPBP1-207ENST00000509162 KRT27Q7Z3Y8 459 aa9.93□□□□□ -0.82
TOPBP1-207ENST00000509162 LTV1Q96GA3 475 aaPredicted RBP9.93□□□□□ -0.82
TOPBP1-207ENST00000509162 NBPF4Q96M43 638 aa9.93□□□□□ -0.82
TOPBP1-207ENST00000509162 BCL9O00512 1426 aa9.92□□□□□ -0.82
TOPBP1-207ENST00000509162 MARCH10Q8NA82 808 aaPredicted RBP9.92□□□□□ -0.82
TOPBP1-207ENST00000509162 OCEL1Q9H607 264 aa9.92□□□□□ -0.82
TOPBP1-207ENST00000509162 THRAP3Q9Y2W1 955 aaKnown RBP9.92□□□□□ -0.82
TOPBP1-207ENST00000509162 RGPD3A6NKT7 1758 aaPredicted RBP9.91□□□□□ -0.82
TOPBP1-207ENST00000509162 RGPD4Q7Z3J3 1758 aa9.91□□□□□ -0.82
TOPBP1-207ENST00000509162 EVA1CP58658 441 aa9.91□□□□□ -0.82
TOPBP1-207ENST00000509162 EIF4A2Q14240 407 aaKnown RBP9.91□□□□□ -0.82
TOPBP1-207ENST00000509162 PAPPAQ13219 1627 aa9.91□□□□□ -0.82
TOPBP1-207ENST00000509162 A0A0G2JS52 829 aa9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 CSB-PGBD3P0DP91 1061 aa9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 AMPHP49418 695 aa9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 MYT1Q01538 1121 aa9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 GOLGA2Q08379 1002 aa9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 CC2D1BQ5T0F9 858 aaKnown RBP9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 NLRP2Q9NX02 1062 aa9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 BTAF1O14981 1849 aa9.9□□□□□ -0.82
TOPBP1-207ENST00000509162 PARD3Q8TEW0 1356 aa9.89□□□□□ -0.83
TOPBP1-207ENST00000509162 IGSF1Q8N6C5 1336 aa9.89□□□□□ -0.83
TOPBP1-207ENST00000509162 GTPBP6O43824 516 aaPredicted RBP9.89□□□□□ -0.83
TOPBP1-207ENST00000509162 DEFB132Q7Z7B7 95 aa9.89□□□□□ -0.83
TOPBP1-207ENST00000509162 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
TOPBP1-207ENST00000509162 MKRN3Q13064 507 aaKnown RBP9.88□□□□□ -0.83
TOPBP1-207ENST00000509162 AEBP1Q8IUX7 1158 aa9.88□□□□□ -0.83
TOPBP1-207ENST00000509162 EYA1Q99502 592 aa9.88□□□□□ -0.83
TOPBP1-207ENST00000509162 KNSTRNQ9Y448 316 aa9.88□□□□□ -0.83
TOPBP1-207ENST00000509162 KDRP35968 1356 aa9.88□□□□□ -0.83
TOPBP1-207ENST00000509162 ADAMTS7Q9UKP4 1686 aa9.87□□□□□ -0.83
TOPBP1-207ENST00000509162 IL2RBP14784 551 aa9.87□□□□□ -0.83
TOPBP1-207ENST00000509162 IL13P35225 146 aa9.87□□□□□ -0.83
TOPBP1-207ENST00000509162 MORC1Q86VD1 984 aa9.87□□□□□ -0.83
TOPBP1-207ENST00000509162 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-207ENST00000509162 KDM6AO15550 1401 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-207ENST00000509162 CNGB1Q14028 1251 aaPredicted RBP9.86□□□□□ -0.83
TOPBP1-207ENST00000509162 DDB1Q16531 1140 aa9.86□□□□□ -0.83
TOPBP1-207ENST00000509162 KCNQ2O43526 872 aa9.85□□□□□ -0.83
TOPBP1-207ENST00000509162 TRIM37O94972 964 aa9.85□□□□□ -0.83
TOPBP1-207ENST00000509162 LY75O60449 1722 aa9.85□□□□□ -0.83
TOPBP1-207ENST00000509162 ITGB4P16144 1822 aa9.84□□□□□ -0.83
TOPBP1-207ENST00000509162 TUBGCP6Q96RT7 1819 aa9.84□□□□□ -0.83
TOPBP1-207ENST00000509162 CYP27B1O15528 508 aa9.84□□□□□ -0.83
TOPBP1-207ENST00000509162 MTHFSP49914 203 aa9.84□□□□□ -0.83
TOPBP1-207ENST00000509162 PDCD7Q8N8D1 485 aaKnown RBP9.84□□□□□ -0.83
TOPBP1-207ENST00000509162 CDCA7Q9BWT1 371 aaPredicted RBP9.84□□□□□ -0.83
TOPBP1-207ENST00000509162 PPP2R1AP30153 589 aa9.83□□□□□ -0.84
TOPBP1-207ENST00000509162 CAMKK2Q96RR4 588 aa9.83□□□□□ -0.84
TOPBP1-207ENST00000509162 MRC1P22897 1456 aa9.83□□□□□ -0.84
TOPBP1-207ENST00000509162 CASZ1Q86V15 1759 aa9.83□□□□□ -0.84
TOPBP1-207ENST00000509162 EN1Q05925 392 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 DDX10Q13206 875 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 PDE3BQ13370 1112 aa9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 NBR1Q14596 966 aa9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 EZH2Q15910 746 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 FAM196AQ6ZSG2 479 aa9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 ANO8Q9HCE9 1232 aaPredicted RBP9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 VIRMAQ69YN4 1812 aaKnown RBP9.82□□□□□ -0.84
TOPBP1-207ENST00000509162 PLEKHG2Q9H7P9 1386 aa9.81□□□□□ -0.84
TOPBP1-207ENST00000509162 ACSBG1Q96GR2 724 aa9.81□□□□□ -0.84
TOPBP1-207ENST00000509162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.81□□□□□ -0.842e-6■■■■□ 25.6
TOPBP1-207ENST00000509162 EXOC5O00471 708 aa9.8□□□□□ -0.84
TOPBP1-207ENST00000509162 ZCRB1Q8TBF4 217 aaKnown RBP9.8□□□□□ -0.84
TOPBP1-207ENST00000509162 SIPA1L3O60292 1781 aaPredicted RBP9.8□□□□□ -0.84
TOPBP1-207ENST00000509162 SCN11AQ9UI33 1791 aa9.8□□□□□ -0.84
TOPBP1-207ENST00000509162 ZEB1P37275 1124 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-207ENST00000509162 DDX54Q8TDD1 881 aaKnown RBP9.79□□□□□ -0.84
TOPBP1-207ENST00000509162 L3MBTL3Q96JM7 780 aaPredicted RBP9.79□□□□□ -0.84
TOPBP1-207ENST00000509162 PCDH11XQ9BZA7 1347 aa9.79□□□□□ -0.84
TOPBP1-207ENST00000509162 PCDH11YQ9BZA8 1340 aa9.79□□□□□ -0.84
TOPBP1-207ENST00000509162 TJP1Q07157 1748 aa9.79□□□□□ -0.84
TOPBP1-207ENST00000509162 CICQ96RK0 1608 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 HMOX1P09601 288 aa9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 PHKG2P15735 406 aa9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 TATP17735 454 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 SULT6B1Q6IMI4 303 aa9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 CCDC125Q86Z20 511 aa9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 SLAIN1Q8ND83 568 aa9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 RAPGEF4Q8WZA2 1011 aa9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 BCL11BQ9C0K0 894 aaPredicted RBP9.78□□□□□ -0.84
TOPBP1-207ENST00000509162 TAF1LQ8IZX4 1826 aa9.77□□□□□ -0.84
TOPBP1-207ENST00000509162 C5P01031 1676 aa9.77□□□□□ -0.84
TOPBP1-207ENST00000509162 APBA3O96018 575 aa9.77□□□□□ -0.85
TOPBP1-207ENST00000509162 LCE2DQ5TA82 110 aaPredicted RBP9.77□□□□□ -0.85
TOPBP1-207ENST00000509162 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
TOPBP1-207ENST00000509162 LRP5O75197 1615 aa9.77□□□□□ -0.85
TOPBP1-207ENST00000509162 COL5A3P25940 1745 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms