RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ZBTB7CA1YPR0 619 aa11.54□□□□□ -0.56
HTT-205ENST00000509043 RNMTO43148 476 aaKnown RBP11.54□□□□□ -0.56
HTT-205ENST00000509043 EIF4A1P60842 406 aaKnown RBP11.54□□□□□ -0.56
HTT-205ENST00000509043 BECN1Q14457 450 aa11.54□□□□□ -0.56
HTT-205ENST00000509043 HDGFL1Q5TGJ6 251 aa11.54□□□□□ -0.56
HTT-205ENST00000509043 SIRT2Q8IXJ6 389 aa11.54□□□□□ -0.56
HTT-205ENST00000509043 RAPGEF4Q8WZA2 1011 aa11.54□□□□□ -0.56
HTT-205ENST00000509043 SPG7Q9UQ90 795 aa11.54□□□□□ -0.56
HTT-205ENST00000509043 BTBD11A6QL63 1104 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 GNAI2P04899 355 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 HSP90AB1P08238 724 aaKnown RBP11.53□□□□□ -0.56
HTT-205ENST00000509043 TATP17735 454 aaPredicted RBP11.53□□□□□ -0.56
HTT-205ENST00000509043 ANKRD45Q5TZF3 282 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 CEP85Q6P2H3 762 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 LRRC59Q96AG4 307 aaKnown RBP11.53□□□□□ -0.56
HTT-205ENST00000509043 TBC1D32Q96NH3 1257 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 HDAC5Q9UQL6 1122 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 COL18A1P39060 1754 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 STRCQ7RTU9 1775 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 IBTKQ9P2D0 1353 aaPredicted RBP11.53□□□□□ -0.56
HTT-205ENST00000509043 HEG1Q9ULI3 1381 aa11.53□□□□□ -0.56
HTT-205ENST00000509043 CRYBG1Q9Y4K1 1723 aa11.52□□□□□ -0.56
HTT-205ENST00000509043 FKBP5Q13451 457 aaPredicted RBP11.52□□□□□ -0.57
HTT-205ENST00000509043 LNPKQ9C0E8 428 aa11.52□□□□□ -0.57
HTT-205ENST00000509043 AXIN2Q9Y2T1 843 aa11.52□□□□□ -0.57
HTT-205ENST00000509043 RGPD2P0DJD1 1756 aa11.51□□□□□ -0.57
HTT-205ENST00000509043 XIRP1Q702N8 1843 aaKnown RBP11.51□□□□□ -0.57
HTT-205ENST00000509043 HSPA2P54652 639 aa11.51□□□□□ -0.57
HTT-205ENST00000509043 BRINP3Q76B58 766 aa11.51□□□□□ -0.57
HTT-205ENST00000509043 G2E3Q7L622 706 aa11.51□□□□□ -0.57
HTT-205ENST00000509043 C1orf115Q9H7X2 142 aa11.51□□□□□ -0.57
HTT-205ENST00000509043 LGR6Q9HBX8 967 aa11.51□□□□□ -0.57
HTT-205ENST00000509043 USP35Q9P2H5 1018 aa11.51□□□□□ -0.57
HTT-205ENST00000509043 SOS2Q07890 1332 aaPredicted RBP11.51□□□□□ -0.57
HTT-205ENST00000509043 KDM4FA0A1W2PPD8 638 aa11.5□□□□□ -0.57
HTT-205ENST00000509043 ZC3H6P61129 1189 aaKnown RBP11.5□□□□□ -0.57
HTT-205ENST00000509043 MEIS3Q99687 375 aa11.5□□□□□ -0.57
HTT-205ENST00000509043 SLAIN2Q9P270 581 aa11.5□□□□□ -0.57
HTT-205ENST00000509043 DBF4Q9UBU7 674 aaPredicted RBP11.5□□□□□ -0.57
HTT-205ENST00000509043 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
HTT-205ENST00000509043 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
HTT-205ENST00000509043 IFNL2Q8IZJ0 200 aa11.49□□□□□ -0.57
HTT-205ENST00000509043 NLRP2Q9NX02 1062 aa11.49□□□□□ -0.57
HTT-205ENST00000509043 MRC1P22897 1456 aa11.49□□□□□ -0.57
HTT-205ENST00000509043 CSB-PGBD3P0DP91 1061 aa11.48□□□□□ -0.57
HTT-205ENST00000509043 MPRIPQ6WCQ1 1025 aa11.48□□□□□ -0.57
HTT-205ENST00000509043 DCAF5Q96JK2 942 aa11.48□□□□□ -0.57
HTT-205ENST00000509043 SRCIN1Q9C0H9 1055 aa11.48□□□□□ -0.57
HTT-205ENST00000509043 HYPKQ9NX55 129 aa11.48□□□□□ -0.57
HTT-205ENST00000509043 PKD1L3Q7Z443 1732 aa11.48□□□□□ -0.57
HTT-205ENST00000509043 GIGYF1O75420 1035 aaPredicted RBP11.47□□□□□ -0.57
HTT-205ENST00000509043 ALDH1L1O75891 902 aa11.47□□□□□ -0.57
HTT-205ENST00000509043 SEC24BO95487 1268 aa11.47□□□□□ -0.57
HTT-205ENST00000509043 PHKG2P15735 406 aa11.47□□□□□ -0.57
HTT-205ENST00000509043 ATP8B2P98198 1209 aa11.47□□□□□ -0.57
HTT-205ENST00000509043 C22orf23Q9BZE7 217 aa11.47□□□□□ -0.57
HTT-205ENST00000509043 OSBPL3Q9H4L5 887 aa11.47□□□□□ -0.57
HTT-205ENST00000509043 SLC52A2Q9HAB3 445 aa11.47□□□□□ -0.57
HTT-205ENST00000509043 RGPD5Q99666 1765 aa11.46□□□□□ -0.57
HTT-205ENST00000509043 PARP4Q9UKK3 1724 aaKnown RBP11.46□□□□□ -0.57
HTT-205ENST00000509043 WDR17Q8IZU2 1322 aa11.46□□□□□ -0.57
HTT-205ENST00000509043 F6X3S4 739 aa11.46□□□□□ -0.57
HTT-205ENST00000509043 CDC45O75419 566 aa11.46□□□□□ -0.57
HTT-205ENST00000509043 DDX58O95786 925 aaKnown RBP11.46□□□□□ -0.57
HTT-205ENST00000509043 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
HTT-205ENST00000509043 RBM25P49756 843 aaKnown RBP11.46□□□□□ -0.57
HTT-205ENST00000509043 CASC1Q6TDU7 716 aa11.46□□□□□ -0.57
HTT-205ENST00000509043 PLEKHM2Q8IWE5 1019 aa11.46□□□□□ -0.57
HTT-205ENST00000509043 DNAAF4Q8WXU2 420 aa11.46□□□□□ -0.57
HTT-205ENST00000509043 SCN11AQ9UI33 1791 aa11.46□□□□□ -0.58
HTT-205ENST00000509043 RAB11FIP3O75154 756 aa11.45□□□□□ -0.58
HTT-205ENST00000509043 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
HTT-205ENST00000509043 TTC22Q5TAA0 569 aa11.45□□□□□ -0.58
HTT-205ENST00000509043 CHPF2Q9P2E5 772 aa11.45□□□□□ -0.58
HTT-205ENST00000509043 MEGF6O75095 1541 aa11.45□□□□□ -0.58
HTT-205ENST00000509043 KDM6AO15550 1401 aaPredicted RBP11.44□□□□□ -0.58
HTT-205ENST00000509043 AOX1Q06278 1338 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 ZNF335Q9H4Z2 1342 aaPredicted RBP11.44□□□□□ -0.58
HTT-205ENST00000509043 EIF2S2P20042 333 aaKnown RBP11.44□□□□□ -0.58
HTT-205ENST00000509043 HSP90AB4PQ58FF6 505 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 BEND3Q5T5X7 828 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 ZNF790Q6PG37 636 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 KSR2Q6VAB6 950 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 PRDM11Q9NQV5 511 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 DDX21Q9NR30 783 aaKnown RBP eCLIP11.44□□□□□ -0.58
HTT-205ENST00000509043 NHSL1Q5SYE7 1610 aa11.44□□□□□ -0.58
HTT-205ENST00000509043 ERBB4Q15303 1308 aa11.43□□□□□ -0.58
HTT-205ENST00000509043 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
HTT-205ENST00000509043 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
HTT-205ENST00000509043 MFAP1P55081 439 aaKnown RBP11.43□□□□□ -0.58
HTT-205ENST00000509043 IL27Q8NEV9 243 aa11.43□□□□□ -0.58
HTT-205ENST00000509043 SSH3Q8TE77 659 aa11.43□□□□□ -0.58
HTT-205ENST00000509043 DDX17Q92841 729 aaKnown RBP11.43□□□□□ -0.58
HTT-205ENST00000509043 LRRCC1Q9C099 1032 aa11.43□□□□□ -0.58
HTT-205ENST00000509043 PHAXQ9H814 394 aaKnown RBP11.43□□□□□ -0.58
HTT-205ENST00000509043 PI4KAP2A4QPH2 592 aa11.42□□□□□ -0.58
HTT-205ENST00000509043 MTX1Q13505 466 aa11.42□□□□□ -0.58
HTT-205ENST00000509043 POLA2Q14181 598 aa11.42□□□□□ -0.58
HTT-205ENST00000509043 TTC5Q8N0Z6 440 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms