RNA–Protein interactions for RNA: ENST00000508948.5

ARRDC3-205, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-205ENST00000508948 SLC39A6Q13433 755 aa11.23□□□□□ -0.61
ARRDC3-205ENST00000508948 NFE2L2Q16236 605 aa11.23□□□□□ -0.61
ARRDC3-205ENST00000508948 ZNF827Q17R98 1081 aa11.23□□□□□ -0.61
ARRDC3-205ENST00000508948 SMARCC1Q92922 1105 aaPredicted RBP11.23□□□□□ -0.61
ARRDC3-205ENST00000508948 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
ARRDC3-205ENST00000508948 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
ARRDC3-205ENST00000508948 RRP7AQ9Y3A4 280 aaKnown RBP11.23□□□□□ -0.61
ARRDC3-205ENST00000508948 MRC1P22897 1456 aa11.22□□□□□ -0.61
ARRDC3-205ENST00000508948 NBPF14Q5TI25 921 aa11.22□□□□□ -0.61
ARRDC3-205ENST00000508948 PNISRQ8TF01 805 aaKnown RBP11.22□□□□□ -0.61
ARRDC3-205ENST00000508948 RBM42Q9BTD8 480 aaKnown RBP11.22□□□□□ -0.61
ARRDC3-205ENST00000508948 THUMPD2Q9BTF0 503 aaKnown RBP11.22□□□□□ -0.61
ARRDC3-205ENST00000508948 MAPK8IP3Q9UPT6 1336 aa11.22□□□□□ -0.61
ARRDC3-205ENST00000508948 DLG5Q8TDM6 1919 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 PAPPAQ13219 1627 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 LOC102724428A0A0B4J2F2 783 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 KCNQ3O43525 872 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 NEFMP07197 916 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 TMPOP42166 694 aaKnown RBP11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 SIK1P57059 783 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 ITPK1Q13572 414 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 NEUROD2Q15784 382 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 SLC27A3Q5K4L6 730 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 AKT1S1Q96B36 256 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 RUNDC1Q96C34 613 aa11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 PDGFDQ9GZP0 370 aaPredicted RBP11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 PNNQ9H307 717 aaKnown RBP11.21□□□□□ -0.61
ARRDC3-205ENST00000508948 CEMIPQ8WUJ3 1361 aa11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 RIPK4P57078 832 aa11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 TEFQ10587 303 aa11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 SLC15A2Q16348 729 aa11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 LINC00116Q8NCU8 138 aa11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 RTF1Q92541 710 aaKnown RBP11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 STK32BQ9NY57 414 aa11.2□□□□□ -0.62
ARRDC3-205ENST00000508948 SIPA1L3O60292 1781 aaPredicted RBP11.19□□□□□ -0.62
ARRDC3-205ENST00000508948 HTATSF1O43719 755 aaKnown RBP11.19□□□□□ -0.62
ARRDC3-205ENST00000508948 ATP6V1AP38606 617 aa11.19□□□□□ -0.62
ARRDC3-205ENST00000508948 DIEXFQ68CQ4 756 aaKnown RBP11.19□□□□□ -0.62
ARRDC3-205ENST00000508948 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
ARRDC3-205ENST00000508948 APAF1O14727 1248 aa11.18□□□□□ -0.62
ARRDC3-205ENST00000508948 AMIGO3Q86WK7 504 aa11.18□□□□□ -0.62
ARRDC3-205ENST00000508948 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
ARRDC3-205ENST00000508948 TAF1LQ8IZX4 1826 aa11.18□□□□□ -0.62
ARRDC3-205ENST00000508948 C5P01031 1676 aa11.17□□□□□ -0.62
ARRDC3-205ENST00000508948 BTBD11A6QL63 1104 aa11.17□□□□□ -0.62
ARRDC3-205ENST00000508948 FAM9BQ8IZU0 186 aa11.17□□□□□ -0.62
ARRDC3-205ENST00000508948 MIER1Q8N108 512 aa11.17□□□□□ -0.62
ARRDC3-205ENST00000508948 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
ARRDC3-205ENST00000508948 TUBGCP6Q96RT7 1819 aa11.16□□□□□ -0.62
ARRDC3-205ENST00000508948 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
ARRDC3-205ENST00000508948 ZNF496Q96IT1 587 aaPredicted RBP11.16□□□□□ -0.62
ARRDC3-205ENST00000508948 C4BP0C0L5 1744 aa11.15□□□□□ -0.62
ARRDC3-205ENST00000508948 PNPLA7Q6ZV29 1317 aa11.15□□□□□ -0.62
ARRDC3-205ENST00000508948 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
ARRDC3-205ENST00000508948 ZNF790Q6PG37 636 aa11.15□□□□□ -0.62
ARRDC3-205ENST00000508948 TFCP2L1Q9NZI6 479 aa11.15□□□□□ -0.62
ARRDC3-205ENST00000508948 TJP1Q07157 1748 aa11.15□□□□□ -0.63
ARRDC3-205ENST00000508948 CASZ1Q86V15 1759 aa11.14□□□□□ -0.63
ARRDC3-205ENST00000508948 UBR2Q8IWV8 1755 aa11.14□□□□□ -0.63
ARRDC3-205ENST00000508948 PRAMEF22A3QJZ6 481 aa11.14□□□□□ -0.63
ARRDC3-205ENST00000508948 COL23A1Q86Y22 540 aaPredicted RBP11.14□□□□□ -0.63
ARRDC3-205ENST00000508948 TTC5Q8N0Z6 440 aa11.14□□□□□ -0.63
ARRDC3-205ENST00000508948 COL5A3P25940 1745 aaPredicted RBP11.13□□□□□ -0.63
ARRDC3-205ENST00000508948 PHF14O94880 888 aa11.13□□□□□ -0.63
ARRDC3-205ENST00000508948 ZBTB7AO95365 584 aa11.13□□□□□ -0.63
ARRDC3-205ENST00000508948 AK7Q96M32 723 aa11.13□□□□□ -0.63
ARRDC3-205ENST00000508948 ATF5Q9Y2D1 282 aaPredicted RBP11.13□□□□□ -0.63
ARRDC3-205ENST00000508948 SALL2Q9Y467 1007 aaPredicted RBP11.13□□□□□ -0.63
ARRDC3-205ENST00000508948 ZNF831Q5JPB2 1677 aa11.13□□□□□ -0.63
ARRDC3-205ENST00000508948 GNPATO15228 680 aa11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 MSH5O43196 834 aa11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 CYP19A1P11511 503 aaPredicted RBP11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 INTS5Q6P9B9 1019 aaKnown RBP11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 FMNL2Q96PY5 1086 aa11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 LAS1LQ9Y4W2 734 aaKnown RBP11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 HEG1Q9ULI3 1381 aa11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 MYH14Q7Z406 1995 aaKnown RBP11.12□□□□□ -0.63
ARRDC3-205ENST00000508948 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
ARRDC3-205ENST00000508948 CCER2I3L3R5 266 aa11.11□□□□□ -0.63
ARRDC3-205ENST00000508948 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
ARRDC3-205ENST00000508948 VSIG10Q8N0Z9 540 aa11.11□□□□□ -0.63
ARRDC3-205ENST00000508948 USP16Q9Y5T5 823 aa11.11□□□□□ -0.63
ARRDC3-205ENST00000508948 QSER1Q2KHR3 1735 aa11.11□□□□□ -0.63
ARRDC3-205ENST00000508948 KDM3BQ7LBC6 1761 aa11.11□□□□□ -0.63
ARRDC3-205ENST00000508948 CNTNAP4Q9C0A0 1308 aa11.1□□□□□ -0.63
ARRDC3-205ENST00000508948 CICQ96RK0 1608 aaPredicted RBP11.1□□□□□ -0.63
ARRDC3-205ENST00000508948 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
ARRDC3-205ENST00000508948 RPS6KA4O75676 772 aa11.1□□□□□ -0.63
ARRDC3-205ENST00000508948 EIF4A1P60842 406 aaKnown RBP11.1□□□□□ -0.63
ARRDC3-205ENST00000508948 TSPYL4Q9UJ04 414 aa11.1□□□□□ -0.63
ARRDC3-205ENST00000508948 ZBTB1Q9Y2K1 713 aa11.1□□□□□ -0.63
ARRDC3-205ENST00000508948 CHL1O00533 1208 aa11.09□□□□□ -0.63
ARRDC3-205ENST00000508948 A1BGP04217 495 aa11.09□□□□□ -0.63
ARRDC3-205ENST00000508948 PIP4K2AP48426 406 aaPredicted RBP11.09□□□□□ -0.63
ARRDC3-205ENST00000508948 KRT24Q2M2I5 525 aa11.09□□□□□ -0.63
ARRDC3-205ENST00000508948 MSL1Q68DK7 614 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms