RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 DLG5Q8TDM6 1919 aa24.37■■□□□ 1.49
CLDND1-220ENST00000508902 UBR3Q6ZT12 1888 aa24.37■■□□□ 1.49
CLDND1-220ENST00000508902 RNMTO43148 476 aaKnown RBP24.37■■□□□ 1.49
CLDND1-220ENST00000508902 PRKRIP1Q9H875 184 aaPredicted RBP24.37■■□□□ 1.49
CLDND1-220ENST00000508902 TJP1Q07157 1748 aa24.37■■□□□ 1.49
CLDND1-220ENST00000508902 MYBBP1AQ9BQG0 1328 aaKnown RBP24.36■■□□□ 1.49
CLDND1-220ENST00000508902 ITPK1Q13572 414 aa24.36■■□□□ 1.49
CLDND1-220ENST00000508902 AMIGO3Q86WK7 504 aa24.36■■□□□ 1.49
CLDND1-220ENST00000508902 CICQ96RK0 1608 aaPredicted RBP24.35■■□□□ 1.49
CLDND1-220ENST00000508902 MAP3K5Q99683 1374 aa24.35■■□□□ 1.49
CLDND1-220ENST00000508902 NUDCQ9Y266 331 aa24.35■■□□□ 1.49
CLDND1-220ENST00000508902 COL24A1Q17RW2 1714 aa24.35■■□□□ 1.49
CLDND1-220ENST00000508902 PNPLA7Q6ZV29 1317 aa24.35■■□□□ 1.49
CLDND1-220ENST00000508902 UBR2Q8IWV8 1755 aa24.34■■□□□ 1.49
CLDND1-220ENST00000508902 NFATC2IPQ8NCF5 419 aa24.34■■□□□ 1.49
CLDND1-220ENST00000508902 SMARCC1Q92922 1105 aaPredicted RBP24.34■■□□□ 1.49
CLDND1-220ENST00000508902 LOC102724428A0A0B4J2F2 783 aa24.33■■□□□ 1.49
CLDND1-220ENST00000508902 SIK1P57059 783 aa24.33■■□□□ 1.49
CLDND1-220ENST00000508902 CABP4P57796 275 aa24.33■■□□□ 1.49
CLDND1-220ENST00000508902 KCPQ6ZWJ8 1503 aa24.33■■□□□ 1.49
CLDND1-220ENST00000508902 MYH14Q7Z406 1995 aaKnown RBP24.33■■□□□ 1.48
CLDND1-220ENST00000508902 LINC00116Q8NCU8 138 aa24.32■■□□□ 1.48
CLDND1-220ENST00000508902 IL17REQ8NFR9 667 aa24.32■■□□□ 1.48
CLDND1-220ENST00000508902 PLEKHF1Q96S99 279 aa24.32■■□□□ 1.48
CLDND1-220ENST00000508902 SLC52A2Q9HAB3 445 aa24.32■■□□□ 1.48
CLDND1-220ENST00000508902 FCHSD2O94868 740 aa24.31■■□□□ 1.48
CLDND1-220ENST00000508902 SMIM5Q71RC9 77 aa24.31■■□□□ 1.48
CLDND1-220ENST00000508902 CEMIPQ8WUJ3 1361 aa24.3■■□□□ 1.48
CLDND1-220ENST00000508902 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
CLDND1-220ENST00000508902 ZBTB7AO95365 584 aa24.29■■□□□ 1.48
CLDND1-220ENST00000508902 SLC39A6Q13433 755 aa24.27■■□□□ 1.48
CLDND1-220ENST00000508902 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
CLDND1-220ENST00000508902 PTGER2P43116 358 aa24.26■■□□□ 1.47
CLDND1-220ENST00000508902 SGIP1Q9BQI5 828 aa24.26■■□□□ 1.47
CLDND1-220ENST00000508902 ATP6V1AP38606 617 aa24.24■■□□□ 1.47
CLDND1-220ENST00000508902 CCDC184Q52MB2 194 aa24.24■■□□□ 1.47
CLDND1-220ENST00000508902 COL23A1Q86Y22 540 aaPredicted RBP24.24■■□□□ 1.47
CLDND1-220ENST00000508902 PTCD1O75127 700 aaKnown RBP24.23■■□□□ 1.47
CLDND1-220ENST00000508902 DCTN1Q14203 1278 aa24.23■■□□□ 1.47
CLDND1-220ENST00000508902 RBM42Q9BTD8 480 aaKnown RBP24.23■■□□□ 1.47
CLDND1-220ENST00000508902 TFCP2L1Q9NZI6 479 aa24.23■■□□□ 1.47
CLDND1-220ENST00000508902 ATF5Q9Y2D1 282 aaPredicted RBP24.23■■□□□ 1.47
CLDND1-220ENST00000508902 SPON1Q9HCB6 807 aa24.22■■□□□ 1.47
CLDND1-220ENST00000508902 C4AP0C0L4 1744 aa24.21■■□□□ 1.47
CLDND1-220ENST00000508902 MCM10Q7L590 875 aa24.21■■□□□ 1.47
CLDND1-220ENST00000508902 MTFR1LQ9H019 292 aa24.2■■□□□ 1.46
CLDND1-220ENST00000508902 KCNQ3O43525 872 aa24.18■■□□□ 1.46
CLDND1-220ENST00000508902 KDM3BQ7LBC6 1761 aa24.17■■□□□ 1.46
CLDND1-220ENST00000508902 AK7Q96M32 723 aa24.17■■□□□ 1.46
CLDND1-220ENST00000508902 CNTNAP4Q9C0A0 1308 aa24.16■■□□□ 1.46
CLDND1-220ENST00000508902 NFE2L2Q16236 605 aa24.16■■□□□ 1.46
CLDND1-220ENST00000508902 DNAJC10Q8IXB1 793 aa24.16■■□□□ 1.46
CLDND1-220ENST00000508902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.15■■□□□ 1.46
CLDND1-220ENST00000508902 GNPATO15228 680 aa24.15■■□□□ 1.46
CLDND1-220ENST00000508902 PHF14O94880 888 aa24.15■■□□□ 1.46
CLDND1-220ENST00000508902 CCDC146Q8IYE0 955 aa24.15■■□□□ 1.46
CLDND1-220ENST00000508902 THUMPD2Q9BTF0 503 aaKnown RBP24.15■■□□□ 1.46
CLDND1-220ENST00000508902 ADAMTS8Q9UP79 889 aa24.15■■□□□ 1.46
CLDND1-220ENST00000508902 TEFQ10587 303 aa24.14■■□□□ 1.45
CLDND1-220ENST00000508902 ZNF496Q96IT1 587 aaPredicted RBP24.14■■□□□ 1.45
CLDND1-220ENST00000508902 HTATSF1O43719 755 aaKnown RBP24.12■■□□□ 1.45
CLDND1-220ENST00000508902 CRKLP46109 303 aaKnown RBP24.12■■□□□ 1.45
CLDND1-220ENST00000508902 RC3H1Q5TC82 1133 aaKnown RBP24.12■■□□□ 1.45
CLDND1-220ENST00000508902 MSL1Q68DK7 614 aa24.12■■□□□ 1.45
CLDND1-220ENST00000508902 INTS5Q6P9B9 1019 aaKnown RBP24.12■■□□□ 1.45
CLDND1-220ENST00000508902 ZNF790Q6PG37 636 aa24.12■■□□□ 1.45
CLDND1-220ENST00000508902 SLC16A10Q8TF71 515 aa24.12■■□□□ 1.45
CLDND1-220ENST00000508902 SSFA2P28290 1259 aa24.11■■□□□ 1.45
CLDND1-220ENST00000508902 CYP19A1P11511 503 aaPredicted RBP24.1■■□□□ 1.45
CLDND1-220ENST00000508902 HEG1Q9ULI3 1381 aa24.1■■□□□ 1.45
CLDND1-220ENST00000508902 TMPOP42166 694 aaKnown RBP24.09■■□□□ 1.45
CLDND1-220ENST00000508902 RRP7AQ9Y3A4 280 aaKnown RBP24.09■■□□□ 1.45
CLDND1-220ENST00000508902 MAPK8IP3Q9UPT6 1336 aa24.09■■□□□ 1.45
CLDND1-220ENST00000508902 MSH5O43196 834 aa24.08■■□□□ 1.45
CLDND1-220ENST00000508902 RTF1Q92541 710 aaKnown RBP24.08■■□□□ 1.45
CLDND1-220ENST00000508902 PRAMEF22A3QJZ6 481 aa24.07■■□□□ 1.44
CLDND1-220ENST00000508902 BTBD11A6QL63 1104 aa24.07■■□□□ 1.44
CLDND1-220ENST00000508902 RPS6KA4O75676 772 aa24.07■■□□□ 1.44
CLDND1-220ENST00000508902 MIS18AQ9NYP9 233 aa24.07■■□□□ 1.44
CLDND1-220ENST00000508902 WDR43Q15061 677 aaKnown RBP eCLIP24.06■■□□□ 1.44
CLDND1-220ENST00000508902 VSIG10Q8N0Z9 540 aa24.06■■□□□ 1.44
CLDND1-220ENST00000508902 FLAD1Q8NFF5 587 aa24.06■■□□□ 1.44
CLDND1-220ENST00000508902 ZBTB1Q9Y2K1 713 aa24.06■■□□□ 1.44
CLDND1-220ENST00000508902 TTC5Q8N0Z6 440 aa24.05■■□□□ 1.44
CLDND1-220ENST00000508902 ARHGEF1Q92888 912 aaKnown RBP24.05■■□□□ 1.44
CLDND1-220ENST00000508902 RUNDC1Q96C34 613 aa24.05■■□□□ 1.44
CLDND1-220ENST00000508902 RTCBQ9Y3I0 505 aaKnown RBP24.05■■□□□ 1.44
CLDND1-220ENST00000508902 LAMB4A4D0S4 1761 aa24.05■■□□□ 1.44
CLDND1-220ENST00000508902 SOS1Q07889 1333 aaPredicted RBP24.05■■□□□ 1.44
CLDND1-220ENST00000508902 RIPK4P57078 832 aa24.04■■□□□ 1.44
CLDND1-220ENST00000508902 ARXQ96QS3 562 aa24.04■■□□□ 1.44
CLDND1-220ENST00000508902 CCDC87Q9NVE4 849 aa24.04■■□□□ 1.44
CLDND1-220ENST00000508902 PPP1R1BQ9UD71 204 aaPredicted RBP24.04■■□□□ 1.44
CLDND1-220ENST00000508902 TRIM35Q9UPQ4 493 aa24.04■■□□□ 1.44
CLDND1-220ENST00000508902 FHDC1Q9C0D6 1143 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-220ENST00000508902 PNNQ9H307 717 aaKnown RBP24.03■■□□□ 1.44
CLDND1-220ENST00000508902 NEFMP07197 916 aa24.02■■□□□ 1.44
CLDND1-220ENST00000508902 HMGB2P26583 209 aaKnown RBP24.02■■□□□ 1.44
CLDND1-220ENST00000508902 TAF7Q15545 349 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-220ENST00000508902 SRP68Q9UHB9 627 aaKnown RBP24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms