RNA–Protein interactions for RNA: ENST00000508380.1

PPARGC1A-207, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 4

Gene PPARGC1A, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-207ENST00000508380 HMGB2P26583 209 aaKnown RBP6.88□□□□□ -1.31
PPARGC1A-207ENST00000508380 MSL1Q68DK7 614 aa6.88□□□□□ -1.31
PPARGC1A-207ENST00000508380 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
PPARGC1A-207ENST00000508380 PCDH10Q9P2E7 1040 aa6.88□□□□□ -1.31
PPARGC1A-207ENST00000508380 PXDNLA1KZ92 1463 aa6.87□□□□□ -1.31
PPARGC1A-207ENST00000508380 PLEKHG2Q9H7P9 1386 aa6.87□□□□□ -1.31
PPARGC1A-207ENST00000508380 PRIM1P49642 420 aaKnown RBP6.87□□□□□ -1.31
PPARGC1A-207ENST00000508380 N4BP2Q86UW6 1770 aaPredicted RBP6.87□□□□□ -1.31
PPARGC1A-207ENST00000508380 NSD3Q9BZ95 1437 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 USP47Q96K76 1375 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 MAP2P11137 1827 aaKnown RBP6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 SOX12O15370 315 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 POTEIP0CG38 1075 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 HTRA3P83110 453 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 ANKRD24Q8TF21 1146 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 NMRK2Q9NPI5 230 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 WWC3Q9ULE0 1092 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 PCDHB8Q9UN66 801 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 PCDHB13Q9Y5F0 798 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 RGPD2P0DJD1 1756 aa6.86□□□□□ -1.31
PPARGC1A-207ENST00000508380 KTN1Q86UP2 1357 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 RGL2O15211 777 aa6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 GSE1Q14687 1217 aa6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 NBPF1Q3BBV0 1214 aa6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 IFNL1Q8IU54 200 aa6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 DDX54Q8TDD1 881 aaKnown RBP6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 SYTL4Q96C24 671 aaPredicted RBP6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 MEGF6O75095 1541 aa6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 ITGB4P16144 1822 aa6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 CD163L1Q9NR16 1453 aa6.85□□□□□ -1.31
PPARGC1A-207ENST00000508380 EVC2Q86UK5 1308 aa6.84□□□□□ -1.31
PPARGC1A-207ENST00000508380 SBF1O95248 1867 aa6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 RAB3GAP2Q9H2M9 1393 aa6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 SBNO2Q9Y2G9 1366 aa6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 KCPQ6ZWJ8 1503 aa6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 HSPA1AP0DMV8 641 aaKnown RBP6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 HSPA1BP0DMV9 641 aaKnown RBP6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 AMIGO3Q86WK7 504 aa6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 C16orf71Q8IYS4 520 aaPredicted RBP6.83□□□□□ -1.32
PPARGC1A-207ENST00000508380 PALLDQ8WX93 1383 aa6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 C4AP0C0L4 1744 aa6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 ZNF831Q5JPB2 1677 aa6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 ECM2O94769 699 aaPredicted RBP6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 CHRM1P11229 460 aaPredicted RBP6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 SSFA2P28290 1259 aa6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 TGFB2P61812 414 aa6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 ZCRB1Q8TBF4 217 aaKnown RBP6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 IP6K1Q92551 441 aa6.82□□□□□ -1.32
PPARGC1A-207ENST00000508380 CGNL1Q0VF96 1302 aa6.81□□□□□ -1.32
PPARGC1A-207ENST00000508380 KDM2BQ8NHM5 1336 aa6.81□□□□□ -1.32
PPARGC1A-207ENST00000508380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.81□□□□□ -1.32
PPARGC1A-207ENST00000508380 SMC1BQ8NDV3 1235 aa6.81□□□□□ -1.32
PPARGC1A-207ENST00000508380 AK7Q96M32 723 aa6.81□□□□□ -1.32
PPARGC1A-207ENST00000508380 EDC4Q6P2E9 1401 aaKnown RBP6.81□□□□□ -1.32
PPARGC1A-207ENST00000508380 TNRC18O15417 2968 aaPredicted RBP6.81□□□□□ -1.32
PPARGC1A-207ENST00000508380 ZC3H4Q9UPT8 1303 aaKnown RBP6.8□□□□□ -1.32
PPARGC1A-207ENST00000508380 KDM6AO15550 1401 aaPredicted RBP6.8□□□□□ -1.32
PPARGC1A-207ENST00000508380 C9orf131Q5VYM1 1079 aa6.8□□□□□ -1.32
PPARGC1A-207ENST00000508380 NME9Q86XW9 330 aa6.8□□□□□ -1.32
PPARGC1A-207ENST00000508380 TIAM2Q8IVF5 1701 aa6.79□□□□□ -1.32
PPARGC1A-207ENST00000508380 ARHGAP27Q6ZUM4 889 aa6.79□□□□□ -1.32
PPARGC1A-207ENST00000508380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.79□□□□□ -1.326e-11■■■□□ 18.1
PPARGC1A-207ENST00000508380 SMARCC1Q92922 1105 aaPredicted RBP6.79□□□□□ -1.32
PPARGC1A-207ENST00000508380 BCS1LQ9Y276 419 aa6.79□□□□□ -1.32
PPARGC1A-207ENST00000508380 RTL1A6NKG5 1358 aa6.79□□□□□ -1.32
PPARGC1A-207ENST00000508380 COL5A3P25940 1745 aaPredicted RBP6.79□□□□□ -1.32
PPARGC1A-207ENST00000508380 A0A0G2JLW4 131 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 PHF14O94880 888 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 MMP10P09238 476 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 KCNA3P22001 575 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 HOXC9P31274 260 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 DCAF5Q96JK2 942 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 RRAGCQ9HB90 399 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 PRDM10Q9NQV6 1147 aa6.78□□□□□ -1.32
PPARGC1A-207ENST00000508380 PCDH11XQ9BZA7 1347 aa6.77□□□□□ -1.32
PPARGC1A-207ENST00000508380 PCDH11YQ9BZA8 1340 aa6.77□□□□□ -1.32
PPARGC1A-207ENST00000508380 DLEC1Q9Y238 1755 aa6.77□□□□□ -1.33
PPARGC1A-207ENST00000508380 FCHSD2O94868 740 aa6.77□□□□□ -1.33
PPARGC1A-207ENST00000508380 DPEP1P16444 411 aa6.77□□□□□ -1.33
PPARGC1A-207ENST00000508380 SMIM5Q71RC9 77 aa6.77□□□□□ -1.33
PPARGC1A-207ENST00000508380 LINC00116Q8NCU8 138 aa6.77□□□□□ -1.33
PPARGC1A-207ENST00000508380 BMP2KQ9NSY1 1161 aaPredicted RBP6.77□□□□□ -1.33
PPARGC1A-207ENST00000508380 VIRMAQ69YN4 1812 aaKnown RBP6.77□□□□□ -1.33
PPARGC1A-207ENST00000508380 MAP3K19Q56UN5 1328 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 NCAPD2Q15021 1401 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 LOC102724428A0A0B4J2F2 783 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 SIK1P57059 783 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 MPRIPQ6WCQ1 1025 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 NLGN1Q8N2Q7 840 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 LTV1Q96GA3 475 aaPredicted RBP6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 CCDC87Q9NVE4 849 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 RNF181Q9P0P0 153 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 A0A1W2PP64 1363 aa6.76□□□□□ -1.33
PPARGC1A-207ENST00000508380 KDRP35968 1356 aa6.75□□□□□ -1.33
PPARGC1A-207ENST00000508380 GNPATO15228 680 aa6.75□□□□□ -1.33
PPARGC1A-207ENST00000508380 FOXN1O15353 648 aa6.75□□□□□ -1.33
PPARGC1A-207ENST00000508380 CYP27B1O15528 508 aa6.75□□□□□ -1.33
PPARGC1A-207ENST00000508380 ATN1P54259 1190 aaPredicted RBP6.75□□□□□ -1.33
PPARGC1A-207ENST00000508380 NKX1-1Q15270 411 aaPredicted RBP6.75□□□□□ -1.33
PPARGC1A-207ENST00000508380 AMER1Q5JTC6 1135 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms