RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
UBE2D3-222ENST00000508238 PTF1AQ7RTS3 328 aa11.03□□□□□ -0.64
UBE2D3-222ENST00000508238 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
UBE2D3-222ENST00000508238 RGPD4Q7Z3J3 1758 aa11.03□□□□□ -0.64
UBE2D3-222ENST00000508238 RREB1Q92766 1687 aa11.02□□□□□ -0.64
UBE2D3-222ENST00000508238 LRP5O75197 1615 aa11.02□□□□□ -0.65
UBE2D3-222ENST00000508238 FAM208AQ9UK61 1670 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-222ENST00000508238 RRS1Q15050 365 aaKnown RBP11.01□□□□□ -0.65
UBE2D3-222ENST00000508238 LTV1Q96GA3 475 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-222ENST00000508238 MYOM1P52179 1685 aa11.01□□□□□ -0.65
UBE2D3-222ENST00000508238 HSPA5P11021 654 aaKnown RBP11□□□□□ -0.65
UBE2D3-222ENST00000508238 CGNL1Q0VF96 1302 aa11□□□□□ -0.65
UBE2D3-222ENST00000508238 NUP188Q5SRE5 1749 aa11□□□□□ -0.65
UBE2D3-222ENST00000508238 INSRP06213 1382 aa11□□□□□ -0.65
UBE2D3-222ENST00000508238 NSD3Q9BZ95 1437 aa11□□□□□ -0.65
UBE2D3-222ENST00000508238 KCNQ2O43526 872 aa10.99□□□□□ -0.65
UBE2D3-222ENST00000508238 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
UBE2D3-222ENST00000508238 NBPF6Q5VWK0 638 aa10.99□□□□□ -0.65
UBE2D3-222ENST00000508238 NBPF4Q96M43 638 aa10.99□□□□□ -0.65
UBE2D3-222ENST00000508238 KIF20BQ96Q89 1820 aa10.99□□□□□ -0.65
UBE2D3-222ENST00000508238 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-222ENST00000508238 PLSCR2Q9NRY7 297 aa10.98□□□□□ -0.65
UBE2D3-222ENST00000508238 FLT4P35916 1363 aa10.98□□□□□ -0.65
UBE2D3-222ENST00000508238 TXNRD1Q16881 649 aa10.97□□□□□ -0.65
UBE2D3-222ENST00000508238 ZCRB1Q8TBF4 217 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-222ENST00000508238 RGPD2P0DJD1 1756 aa10.97□□□□□ -0.65
UBE2D3-222ENST00000508238 MAP2P11137 1827 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-222ENST00000508238 NHSQ6T4R5 1651 aa10.96□□□□□ -0.65
UBE2D3-222ENST00000508238 SMG6Q86US8 1419 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-222ENST00000508238 WASHC2AQ641Q2 1341 aa10.96□□□□□ -0.65
UBE2D3-222ENST00000508238 IER5LQ5T953 404 aa10.96□□□□□ -0.65
UBE2D3-222ENST00000508238 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
UBE2D3-222ENST00000508238 DDX54Q8TDD1 881 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-222ENST00000508238 IRX5P78411 483 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-222ENST00000508238 RAPGEF4Q8WZA2 1011 aa10.95□□□□□ -0.66
UBE2D3-222ENST00000508238 ACSBG1Q96GR2 724 aa10.95□□□□□ -0.66
UBE2D3-222ENST00000508238 PANK3Q9H999 370 aa10.95□□□□□ -0.66
UBE2D3-222ENST00000508238 ANO8Q9HCE9 1232 aaPredicted RBP10.95□□□□□ -0.66
UBE2D3-222ENST00000508238 POLKQ9UBT6 870 aa10.95□□□□□ -0.66
UBE2D3-222ENST00000508238 EMILIN1Q9Y6C2 1016 aa10.95□□□□□ -0.66
UBE2D3-222ENST00000508238 MEGF6O75095 1541 aa10.94□□□□□ -0.66
UBE2D3-222ENST00000508238 OTUD5Q96G74 571 aa10.94□□□□□ -0.66
UBE2D3-222ENST00000508238 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
UBE2D3-222ENST00000508238 NCAPD2Q15021 1401 aa10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 BTAF1O14981 1849 aa10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 ANKRD26Q9UPS8 1709 aa10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 TATP17735 454 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 SLC15A2Q16348 729 aa10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 PDCD7Q8N8D1 485 aaKnown RBP10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 POLR3GLQ9BT43 218 aa10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
UBE2D3-222ENST00000508238 NSD2O96028 1365 aa10.92□□□□□ -0.66
UBE2D3-222ENST00000508238 PRIM1P49642 420 aaKnown RBP10.92□□□□□ -0.66
UBE2D3-222ENST00000508238 SLC27A3Q5K4L6 730 aa10.92□□□□□ -0.66
UBE2D3-222ENST00000508238 USHBP1Q8N6Y0 703 aa10.92□□□□□ -0.66
UBE2D3-222ENST00000508238 STK32BQ9NY57 414 aa10.92□□□□□ -0.66
UBE2D3-222ENST00000508238 SHANK3Q9BYB0 1731 aa10.92□□□□□ -0.66
UBE2D3-222ENST00000508238 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
UBE2D3-222ENST00000508238 PPM1GO15355 546 aaPredicted RBP10.91□□□□□ -0.66
UBE2D3-222ENST00000508238 EYA1Q99502 592 aa10.91□□□□□ -0.66
UBE2D3-222ENST00000508238 PCDH11XQ9BZA7 1347 aa10.9□□□□□ -0.66
UBE2D3-222ENST00000508238 PCDH11YQ9BZA8 1340 aa10.9□□□□□ -0.66
UBE2D3-222ENST00000508238 CYP27B1O15528 508 aa10.9□□□□□ -0.66
UBE2D3-222ENST00000508238 PLCG2P16885 1265 aa10.9□□□□□ -0.66
UBE2D3-222ENST00000508238 LRRC4BQ9NT99 713 aa10.9□□□□□ -0.66
UBE2D3-222ENST00000508238 PLEKHG2Q9H7P9 1386 aa10.9□□□□□ -0.67
UBE2D3-222ENST00000508238 SEC24BO95487 1268 aa10.89□□□□□ -0.67
UBE2D3-222ENST00000508238 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
UBE2D3-222ENST00000508238 PDGFDQ9GZP0 370 aaPredicted RBP10.89□□□□□ -0.67
UBE2D3-222ENST00000508238 KNSTRNQ9Y448 316 aa10.89□□□□□ -0.67
UBE2D3-222ENST00000508238 CASZ1Q86V15 1759 aa10.89□□□□□ -0.67
UBE2D3-222ENST00000508238 KIF7Q2M1P5 1343 aa10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 PAPPAQ13219 1627 aa10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 TNNT2P45379 298 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 EIF4A2Q14240 407 aaKnown RBP10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 SYTL4Q96C24 671 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 WDR70Q9NW82 654 aa10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 SPG7Q9UQ90 795 aa10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 COLQQ9Y215 455 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-222ENST00000508238 PER1O15534 1290 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-222ENST00000508238 C7P10643 843 aa10.87□□□□□ -0.67
UBE2D3-222ENST00000508238 PTGER2P43116 358 aa10.87□□□□□ -0.67
UBE2D3-222ENST00000508238 MORC1Q86VD1 984 aa10.87□□□□□ -0.67
UBE2D3-222ENST00000508238 MTFR1LQ9H019 292 aa10.87□□□□□ -0.67
UBE2D3-222ENST00000508238 PKD1L3Q7Z443 1732 aa10.87□□□□□ -0.67
UBE2D3-222ENST00000508238 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
UBE2D3-222ENST00000508238 IGSF1Q8N6C5 1336 aa10.86□□□□□ -0.67
UBE2D3-222ENST00000508238 ZNF827Q17R98 1081 aa10.86□□□□□ -0.67
UBE2D3-222ENST00000508238 LY75O60449 1722 aa10.86□□□□□ -0.67
UBE2D3-222ENST00000508238 ZBTB7AO95365 584 aa10.85□□□□□ -0.67
UBE2D3-222ENST00000508238 MICALL2Q8IY33 904 aa10.85□□□□□ -0.67
UBE2D3-222ENST00000508238 SLC16A10Q8TF71 515 aa10.85□□□□□ -0.67
UBE2D3-222ENST00000508238 PPP1R1BQ9UD71 204 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-222ENST00000508238 MPRIPQ6WCQ1 1025 aa10.84□□□□□ -0.67
UBE2D3-222ENST00000508238 IFNL2Q8IZJ0 200 aa10.84□□□□□ -0.67
UBE2D3-222ENST00000508238 SMARCC1Q92922 1105 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-222ENST00000508238 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
UBE2D3-222ENST00000508238 CCNL1Q9UK58 526 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-222ENST00000508238 ITGB4P16144 1822 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms