RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 C1QTNF8P60827 252 aa29.69■■■□□ 2.34
SNCB-204ENST00000508006 PRKAR2BP31323 418 aa29.67■■■□□ 2.34
SNCB-204ENST00000508006 PNISRQ8TF01 805 aaKnown RBP29.67■■■□□ 2.34
SNCB-204ENST00000508006 LY75O60449 1722 aa29.66■■■□□ 2.34
SNCB-204ENST00000508006 NEFMP07197 916 aa29.66■■■□□ 2.34
SNCB-204ENST00000508006 NLGN2Q8NFZ4 835 aa29.66■■■□□ 2.34
SNCB-204ENST00000508006 HMGB2P26583 209 aaKnown RBP29.65■■■□□ 2.34
SNCB-204ENST00000508006 TUBGCP6Q96RT7 1819 aa29.65■■■□□ 2.34
SNCB-204ENST00000508006 COL23A1Q86Y22 540 aaPredicted RBP29.64■■■□□ 2.34
SNCB-204ENST00000508006 MIER1Q8N108 512 aa29.64■■■□□ 2.34
SNCB-204ENST00000508006 ADAMTS8Q9UP79 889 aa29.64■■■□□ 2.34
SNCB-204ENST00000508006 IFNL2Q8IZJ0 200 aa29.63■■■□□ 2.33
SNCB-204ENST00000508006 PLEKHF1Q96S99 279 aa29.63■■■□□ 2.33
SNCB-204ENST00000508006 GRIN3BO60391 1043 aa29.61■■■□□ 2.33
SNCB-204ENST00000508006 GIGYF1O75420 1035 aaPredicted RBP29.61■■■□□ 2.33
SNCB-204ENST00000508006 GAS2L2Q8NHY3 880 aa29.61■■■□□ 2.33
SNCB-204ENST00000508006 COL24A1Q17RW2 1714 aa29.61■■■□□ 2.33
SNCB-204ENST00000508006 CYP27B1O15528 508 aa29.6■■■□□ 2.33
SNCB-204ENST00000508006 NKX1-1Q15270 411 aaPredicted RBP29.6■■■□□ 2.33
SNCB-204ENST00000508006 MSL1Q68DK7 614 aa29.6■■■□□ 2.33
SNCB-204ENST00000508006 MPRIPQ6WCQ1 1025 aa29.6■■■□□ 2.33
SNCB-204ENST00000508006 GOLGB1Q14789 3259 aaKnown RBP29.6■■■□□ 2.33
SNCB-204ENST00000508006 HSP90AB1P08238 724 aaKnown RBP29.59■■■□□ 2.33
SNCB-204ENST00000508006 PHKG2P15735 406 aa29.59■■■□□ 2.33
SNCB-204ENST00000508006 ZNF530Q6P9A1 599 aaPredicted RBP29.59■■■□□ 2.33
SNCB-204ENST00000508006 MAPK8IP3Q9UPT6 1336 aa29.59■■■□□ 2.33
SNCB-204ENST00000508006 MTHFSDQ2M296 383 aaKnown RBP29.58■■■□□ 2.33
SNCB-204ENST00000508006 C1orf141Q5JVX7 400 aa29.58■■■□□ 2.33
SNCB-204ENST00000508006 FLAD1Q8NFF5 587 aa29.58■■■□□ 2.33
SNCB-204ENST00000508006 RUNDC1Q96C34 613 aa29.58■■■□□ 2.33
SNCB-204ENST00000508006 PHACTR3Q96KR7 559 aa29.58■■■□□ 2.33
SNCB-204ENST00000508006 AKAP4Q5JQC9 854 aa29.57■■■□□ 2.32
SNCB-204ENST00000508006 VIRMAQ69YN4 1812 aaKnown RBP29.55■■■□□ 2.32
SNCB-204ENST00000508006 YBX3P16989 372 aaKnown RBP eCLIP29.54■■■□□ 2.32
SNCB-204ENST00000508006 SCN11AQ9UI33 1791 aa29.54■■■□□ 2.32
SNCB-204ENST00000508006 ADAMTS7Q9UKP4 1686 aa29.53■■■□□ 2.32
SNCB-204ENST00000508006 DLG5Q8TDM6 1919 aa29.53■■■□□ 2.32
SNCB-204ENST00000508006 DCAF5Q96JK2 942 aa29.53■■■□□ 2.32
SNCB-204ENST00000508006 PALLDQ8WX93 1383 aa29.52■■■□□ 2.32
SNCB-204ENST00000508006 SMARCC1Q92922 1105 aaPredicted RBP29.52■■■□□ 2.32
SNCB-204ENST00000508006 GNAT3A8MTJ3 354 aa29.5■■■□□ 2.31
SNCB-204ENST00000508006 HTATSF1O43719 755 aaKnown RBP29.5■■■□□ 2.31
SNCB-204ENST00000508006 NFE2L2Q16236 605 aa29.5■■■□□ 2.31
SNCB-204ENST00000508006 AK7Q96M32 723 aa29.5■■■□□ 2.31
SNCB-204ENST00000508006 TOGARAM1Q9Y4F4 1720 aa29.5■■■□□ 2.31
SNCB-204ENST00000508006 CD2APQ9Y5K6 639 aa29.49■■■□□ 2.31
SNCB-204ENST00000508006 C5P01031 1676 aa29.49■■■□□ 2.31
SNCB-204ENST00000508006 ITGB4P16144 1822 aa29.48■■■□□ 2.31
SNCB-204ENST00000508006 FAM9BQ8IZU0 186 aa29.48■■■□□ 2.31
SNCB-204ENST00000508006 CCDC146Q8IYE0 955 aa29.47■■■□□ 2.31
SNCB-204ENST00000508006 ERVV-2B6SEH9 535 aa29.46■■■□□ 2.31
SNCB-204ENST00000508006 KDM6AO15550 1401 aaPredicted RBP29.45■■■□□ 2.31
SNCB-204ENST00000508006 PHF14O94880 888 aa29.44■■■□□ 2.3
SNCB-204ENST00000508006 TMPOP42166 694 aaKnown RBP29.44■■■□□ 2.3
SNCB-204ENST00000508006 TAF1LQ8IZX4 1826 aa29.43■■■□□ 2.3
SNCB-204ENST00000508006 NCBP3Q53F19 620 aaKnown RBP29.43■■■□□ 2.3
SNCB-204ENST00000508006 PIGBQ92521 554 aa29.43■■■□□ 2.3
SNCB-204ENST00000508006 RTF1Q92541 710 aaKnown RBP29.43■■■□□ 2.3
SNCB-204ENST00000508006 LMOD3Q0VAK6 560 aa29.42■■■□□ 2.3
SNCB-204ENST00000508006 MRC1P22897 1456 aa29.42■■■□□ 2.3
SNCB-204ENST00000508006 RNMTO43148 476 aaKnown RBP29.41■■■□□ 2.3
SNCB-204ENST00000508006 CEMIPQ8WUJ3 1361 aa29.4■■■□□ 2.3
SNCB-204ENST00000508006 RIPK4P57078 832 aa29.4■■■□□ 2.3
SNCB-204ENST00000508006 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.39■■■□□ 2.3
SNCB-204ENST00000508006 APAF1O14727 1248 aa29.39■■■□□ 2.3
SNCB-204ENST00000508006 NGEFQ8N5V2 710 aa29.39■■■□□ 2.3
SNCB-204ENST00000508006 C4BP0C0L5 1744 aa29.39■■■□□ 2.3
SNCB-204ENST00000508006 SIPA1L3O60292 1781 aaPredicted RBP29.39■■■□□ 2.29
SNCB-204ENST00000508006 TMOD3Q9NYL9 352 aa29.38■■■□□ 2.29
SNCB-204ENST00000508006 SMIM5Q71RC9 77 aa29.37■■■□□ 2.29
SNCB-204ENST00000508006 IL17REQ8NFR9 667 aa29.37■■■□□ 2.29
SNCB-204ENST00000508006 LGR6Q9HBX8 967 aa29.37■■■□□ 2.29
SNCB-204ENST00000508006 GPBP1L1Q9HC44 474 aaPredicted RBP29.37■■■□□ 2.29
SNCB-204ENST00000508006 LOC102724428A0A0B4J2F2 783 aa29.36■■■□□ 2.29
SNCB-204ENST00000508006 SIK1P57059 783 aa29.36■■■□□ 2.29
SNCB-204ENST00000508006 CABP4P57796 275 aa29.36■■■□□ 2.29
SNCB-204ENST00000508006 SSFA2P28290 1259 aa29.35■■■□□ 2.29
SNCB-204ENST00000508006 SLC52A2Q9HAB3 445 aa29.35■■■□□ 2.29
SNCB-204ENST00000508006 ATP10DQ9P241 1426 aa29.35■■■□□ 2.29
SNCB-204ENST00000508006 AMIGO3Q86WK7 504 aa29.34■■■□□ 2.29
SNCB-204ENST00000508006 WWC3Q9ULE0 1092 aa29.34■■■□□ 2.29
SNCB-204ENST00000508006 ATP6V1AP38606 617 aa29.33■■■□□ 2.29
SNCB-204ENST00000508006 TEFQ10587 303 aa29.33■■■□□ 2.29
SNCB-204ENST00000508006 CCDC27Q2M243 656 aa29.33■■■□□ 2.29
SNCB-204ENST00000508006 NEUROD2Q15784 382 aa29.32■■■□□ 2.28
SNCB-204ENST00000508006 LINC00116Q8NCU8 138 aa29.32■■■□□ 2.28
SNCB-204ENST00000508006 ZNF526Q8TF50 670 aaPredicted RBP29.32■■■□□ 2.28
SNCB-204ENST00000508006 ASAP1Q9ULH1 1129 aa29.32■■■□□ 2.28
SNCB-204ENST00000508006 MCM10Q7L590 875 aa29.31■■■□□ 2.28
SNCB-204ENST00000508006 NFATC2IPQ8NCF5 419 aa29.31■■■□□ 2.28
SNCB-204ENST00000508006 RRP7AQ9Y3A4 280 aaKnown RBP29.31■■■□□ 2.28
SNCB-204ENST00000508006 UBR3Q6ZT12 1888 aa29.3■■■□□ 2.28
SNCB-204ENST00000508006 GNPATO15228 680 aa29.3■■■□□ 2.28
SNCB-204ENST00000508006 TRIM35Q9UPQ4 493 aa29.3■■■□□ 2.28
SNCB-204ENST00000508006 DCTN1Q14203 1278 aa29.27■■■□□ 2.28
SNCB-204ENST00000508006 CALD1Q05682 793 aaKnown RBP29.26■■■□□ 2.27
SNCB-204ENST00000508006 ITPK1Q13572 414 aa29.26■■■□□ 2.27
SNCB-204ENST00000508006 ZNF831Q5JPB2 1677 aa29.25■■■□□ 2.27
SNCB-204ENST00000508006 BABAM1Q9NWV8 329 aa29.25■■■□□ 2.27
SNCB-204ENST00000508006 TAF7Q15545 349 aaPredicted RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms