RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 KDM6AO15550 1401 aaPredicted RBP20.81■□□□□ 0.92
COL1A1-211ENST00000507689 ATF5Q9Y2D1 282 aaPredicted RBP20.81■□□□□ 0.92
COL1A1-211ENST00000507689 PAPPAQ13219 1627 aa20.81■□□□□ 0.92
COL1A1-211ENST00000507689 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
COL1A1-211ENST00000507689 RNMTO43148 476 aaKnown RBP20.8■□□□□ 0.92
COL1A1-211ENST00000507689 TEFQ10587 303 aa20.79■□□□□ 0.92
COL1A1-211ENST00000507689 RTF1Q92541 710 aaKnown RBP20.79■□□□□ 0.92
COL1A1-211ENST00000507689 RSPH6AQ9H0K4 717 aa20.79■□□□□ 0.92
COL1A1-211ENST00000507689 SLC52A2Q9HAB3 445 aa20.79■□□□□ 0.92
COL1A1-211ENST00000507689 MYBBP1AQ9BQG0 1328 aaKnown RBP20.78■□□□□ 0.92
COL1A1-211ENST00000507689 MAP3K5Q99683 1374 aa20.78■□□□□ 0.92
COL1A1-211ENST00000507689 POLD1P28340 1107 aa20.78■□□□□ 0.92
COL1A1-211ENST00000507689 PDGFDQ9GZP0 370 aaPredicted RBP20.78■□□□□ 0.92
COL1A1-211ENST00000507689 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
COL1A1-211ENST00000507689 LGR6Q9HBX8 967 aa20.77■□□□□ 0.92
COL1A1-211ENST00000507689 PNPLA7Q6ZV29 1317 aa20.77■□□□□ 0.91
COL1A1-211ENST00000507689 C5P01031 1676 aa20.77■□□□□ 0.91
COL1A1-211ENST00000507689 PTCD1O75127 700 aaKnown RBP20.76■□□□□ 0.91
COL1A1-211ENST00000507689 TTC5Q8N0Z6 440 aa20.76■□□□□ 0.91
COL1A1-211ENST00000507689 CASZ1Q86V15 1759 aa20.76■□□□□ 0.91
COL1A1-211ENST00000507689 MAPK8IP3Q9UPT6 1336 aa20.76■□□□□ 0.91
COL1A1-211ENST00000507689 ZNF316A6NFI3 1004 aaPredicted RBP20.75■□□□□ 0.91
COL1A1-211ENST00000507689 SCN11AQ9UI33 1791 aa20.73■□□□□ 0.91
COL1A1-211ENST00000507689 GNPATO15228 680 aa20.73■□□□□ 0.91
COL1A1-211ENST00000507689 PHF14O94880 888 aa20.73■□□□□ 0.91
COL1A1-211ENST00000507689 LINC00116Q8NCU8 138 aa20.73■□□□□ 0.91
COL1A1-211ENST00000507689 PHACTR3Q96KR7 559 aa20.73■□□□□ 0.91
COL1A1-211ENST00000507689 SSFA2P28290 1259 aa20.72■□□□□ 0.91
COL1A1-211ENST00000507689 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL1A1-211ENST00000507689 RTCBQ9Y3I0 505 aaKnown RBP20.72■□□□□ 0.91
COL1A1-211ENST00000507689 C4BP0C0L5 1744 aa20.72■□□□□ 0.91
COL1A1-211ENST00000507689 QSER1Q2KHR3 1735 aa20.72■□□□□ 0.91
COL1A1-211ENST00000507689 ITPK1Q13572 414 aa20.71■□□□□ 0.91
COL1A1-211ENST00000507689 COL23A1Q86Y22 540 aaPredicted RBP20.71■□□□□ 0.91
COL1A1-211ENST00000507689 ARXQ96QS3 562 aa20.7■□□□□ 0.9
COL1A1-211ENST00000507689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.69■□□□□ 0.9
COL1A1-211ENST00000507689 HTATSF1O43719 755 aaKnown RBP20.69■□□□□ 0.9
COL1A1-211ENST00000507689 PTGER2P43116 358 aa20.69■□□□□ 0.9
COL1A1-211ENST00000507689 RC3H1Q5TC82 1133 aaKnown RBP20.69■□□□□ 0.9
COL1A1-211ENST00000507689 TAF1LQ8IZX4 1826 aa20.69■□□□□ 0.9
COL1A1-211ENST00000507689 SLC39A6Q13433 755 aa20.68■□□□□ 0.9
COL1A1-211ENST00000507689 TRAPPC3LQ5T215 181 aa20.68■□□□□ 0.9
COL1A1-211ENST00000507689 IL17REQ8NFR9 667 aa20.68■□□□□ 0.9
COL1A1-211ENST00000507689 PRKRIP1Q9H875 184 aaPredicted RBP20.68■□□□□ 0.9
COL1A1-211ENST00000507689 MRC1P22897 1456 aa20.68■□□□□ 0.9
COL1A1-211ENST00000507689 KLHL34Q8N239 644 aa20.67■□□□□ 0.9
COL1A1-211ENST00000507689 CNTNAP4Q9C0A0 1308 aa20.67■□□□□ 0.9
COL1A1-211ENST00000507689 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
COL1A1-211ENST00000507689 ADRA2BP18089 450 aa20.66■□□□□ 0.9
COL1A1-211ENST00000507689 ZNF831Q5JPB2 1677 aa20.65■□□□□ 0.9
COL1A1-211ENST00000507689 RFC4P35249 363 aa20.65■□□□□ 0.9
COL1A1-211ENST00000507689 MSL1Q68DK7 614 aa20.65■□□□□ 0.9
COL1A1-211ENST00000507689 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
COL1A1-211ENST00000507689 RPS6KA4O75676 772 aa20.64■□□□□ 0.89
COL1A1-211ENST00000507689 STARD3NLO95772 234 aa20.64■□□□□ 0.89
COL1A1-211ENST00000507689 CRKLP46109 303 aaKnown RBP20.64■□□□□ 0.89
COL1A1-211ENST00000507689 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
COL1A1-211ENST00000507689 MCM10Q7L590 875 aa20.64■□□□□ 0.89
COL1A1-211ENST00000507689 SLC4A9Q96Q91 983 aa20.64■□□□□ 0.89
COL1A1-211ENST00000507689 TEX13AQ9BXU3 409 aaPredicted RBP20.64■□□□□ 0.89
COL1A1-211ENST00000507689 TUBGCP6Q96RT7 1819 aa20.64■□□□□ 0.89
COL1A1-211ENST00000507689 NFE2L2Q16236 605 aa20.63■□□□□ 0.89
COL1A1-211ENST00000507689 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
COL1A1-211ENST00000507689 FMNL2Q96PY5 1086 aa20.63■□□□□ 0.89
COL1A1-211ENST00000507689 FHDC1Q9C0D6 1143 aaPredicted RBP20.63■□□□□ 0.89
COL1A1-211ENST00000507689 CEMIPQ8WUJ3 1361 aa20.62■□□□□ 0.89
COL1A1-211ENST00000507689 ADAMTS7Q9UKP4 1686 aa20.62■□□□□ 0.89
COL1A1-211ENST00000507689 ANP32CO43423 234 aa20.62■□□□□ 0.89
COL1A1-211ENST00000507689 LMOD3Q0VAK6 560 aa20.62■□□□□ 0.89
COL1A1-211ENST00000507689 DNAJC10Q8IXB1 793 aa20.62■□□□□ 0.89
COL1A1-211ENST00000507689 SGIP1Q9BQI5 828 aa20.62■□□□□ 0.89
COL1A1-211ENST00000507689 PLEKHF1Q96S99 279 aa20.61■□□□□ 0.89
COL1A1-211ENST00000507689 CCDC87Q9NVE4 849 aa20.61■□□□□ 0.89
COL1A1-211ENST00000507689 VIRMAQ69YN4 1812 aaKnown RBP20.61■□□□□ 0.89
COL1A1-211ENST00000507689 PNISRQ8TF01 805 aaKnown RBP20.6■□□□□ 0.89
COL1A1-211ENST00000507689 SRCAPQ6ZRS2 3230 aa20.59■□□□□ 0.89
COL1A1-211ENST00000507689 TAF7Q15545 349 aaPredicted RBP20.59■□□□□ 0.89
COL1A1-211ENST00000507689 NLGN1Q8N2Q7 840 aa20.59■□□□□ 0.89
COL1A1-211ENST00000507689 SYT17Q9BSW7 474 aa20.59■□□□□ 0.89
COL1A1-211ENST00000507689 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.89
COL1A1-211ENST00000507689 DCTN1Q14203 1278 aa20.58■□□□□ 0.89
COL1A1-211ENST00000507689 SMIM5Q71RC9 77 aa20.58■□□□□ 0.89
COL1A1-211ENST00000507689 ARHGEF1Q92888 912 aaKnown RBP20.58■□□□□ 0.89
COL1A1-211ENST00000507689 ZPR1O75312 459 aa20.57■□□□□ 0.88
COL1A1-211ENST00000507689 CYP19A1P11511 503 aaPredicted RBP20.57■□□□□ 0.88
COL1A1-211ENST00000507689 RIPK4P57078 832 aa20.57■□□□□ 0.88
COL1A1-211ENST00000507689 RUNDC1Q96C34 613 aa20.57■□□□□ 0.88
COL1A1-211ENST00000507689 ZNF496Q96IT1 587 aaPredicted RBP20.57■□□□□ 0.88
COL1A1-211ENST00000507689 HEG1Q9ULI3 1381 aa20.57■□□□□ 0.88
COL1A1-211ENST00000507689 COL5A3P25940 1745 aaPredicted RBP20.56■□□□□ 0.88
COL1A1-211ENST00000507689 AMIGO3Q86WK7 504 aa20.56■□□□□ 0.88
COL1A1-211ENST00000507689 KCPQ6ZWJ8 1503 aa20.56■□□□□ 0.88
COL1A1-211ENST00000507689 CCDC146Q8IYE0 955 aa20.55■□□□□ 0.88
COL1A1-211ENST00000507689 A0A087WZG4 1122 aa20.54■□□□□ 0.88
COL1A1-211ENST00000507689 CANXP27824 592 aaKnown RBP20.54■□□□□ 0.88
COL1A1-211ENST00000507689 INTS5Q6P9B9 1019 aaKnown RBP20.54■□□□□ 0.88
COL1A1-211ENST00000507689 CICQ96RK0 1608 aaPredicted RBP20.53■□□□□ 0.88
COL1A1-211ENST00000507689 TJP1Q07157 1748 aa20.53■□□□□ 0.88
COL1A1-211ENST00000507689 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
COL1A1-211ENST00000507689 NEUROD2Q15784 382 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms