RNA–Protein interactions for RNA: ENST00000507468.5

AFF1-206, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 1 (best)

Gene AFF1, Length 1,486 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-206ENST00000507468 ITGB4P16144 1822 aa27.47■■□□□ 1.99
AFF1-206ENST00000507468 NHSQ6T4R5 1651 aa27.46■■□□□ 1.99
AFF1-206ENST00000507468 BCL11BQ9C0K0 894 aaPredicted RBP27.46■■□□□ 1.99
AFF1-206ENST00000507468 TAF7Q15545 349 aaPredicted RBP27.45■■□□□ 1.99
AFF1-206ENST00000507468 WDR63Q8IWG1 891 aa27.44■■□□□ 1.98
AFF1-206ENST00000507468 CALD1Q05682 793 aaKnown RBP27.43■■□□□ 1.98
AFF1-206ENST00000507468 SIPA1L3O60292 1781 aaPredicted RBP27.43■■□□□ 1.98
AFF1-206ENST00000507468 BTBD11A6QL63 1104 aa27.41■■□□□ 1.98
AFF1-206ENST00000507468 MIS18AQ9NYP9 233 aa27.41■■□□□ 1.98
AFF1-206ENST00000507468 YTHDC1Q96MU7 727 aaKnown RBP27.4■■□□□ 1.98
AFF1-206ENST00000507468 ASAP1Q9ULH1 1129 aa27.4■■□□□ 1.98
AFF1-206ENST00000507468 LAS1LQ9Y4W2 734 aaKnown RBP27.4■■□□□ 1.98
AFF1-206ENST00000507468 ZNF853P0CG23 659 aa27.39■■□□□ 1.98
AFF1-206ENST00000507468 SLC39A6Q13433 755 aa27.39■■□□□ 1.98
AFF1-206ENST00000507468 CFAP44Q96MT7 982 aa27.39■■□□□ 1.98
AFF1-206ENST00000507468 ATG3Q9NT62 314 aa27.39■■□□□ 1.98
AFF1-206ENST00000507468 IL16Q14005 1332 aa27.39■■□□□ 1.98
AFF1-206ENST00000507468 CHL1O00533 1208 aa27.38■■□□□ 1.97
AFF1-206ENST00000507468 IFT57Q9NWB7 429 aa27.38■■□□□ 1.97
AFF1-206ENST00000507468 ZBED9Q6R2W3 1325 aa27.38■■□□□ 1.97
AFF1-206ENST00000507468 SPINK5Q9NQ38 1064 aaPredicted RBP27.38■■□□□ 1.97
AFF1-206ENST00000507468 BTAF1O14981 1849 aa27.37■■□□□ 1.97
AFF1-206ENST00000507468 BABAM1Q9NWV8 329 aa27.37■■□□□ 1.97
AFF1-206ENST00000507468 TSPYL4Q9UJ04 414 aa27.37■■□□□ 1.97
AFF1-206ENST00000507468 KCNQ3O43525 872 aa27.36■■□□□ 1.97
AFF1-206ENST00000507468 GNAI1P63096 354 aa27.36■■□□□ 1.97
AFF1-206ENST00000507468 GOLGA2Q08379 1002 aa27.36■■□□□ 1.97
AFF1-206ENST00000507468 ZNF790Q6PG37 636 aa27.36■■□□□ 1.97
AFF1-206ENST00000507468 APBA3O96018 575 aa27.34■■□□□ 1.97
AFF1-206ENST00000507468 CDCA7LQ96GN5 454 aa27.33■■□□□ 1.97
AFF1-206ENST00000507468 TNS1Q9HBL0 1735 aaKnown RBP27.33■■□□□ 1.97
AFF1-206ENST00000507468 MBIPQ9NS73 344 aa27.33■■□□□ 1.97
AFF1-206ENST00000507468 PAPPAQ13219 1627 aa27.33■■□□□ 1.96
AFF1-206ENST00000507468 SMARCC1Q92922 1105 aaPredicted RBP27.32■■□□□ 1.96
AFF1-206ENST00000507468 PALLDQ8WX93 1383 aa27.32■■□□□ 1.96
AFF1-206ENST00000507468 TTC5Q8N0Z6 440 aa27.32■■□□□ 1.96
AFF1-206ENST00000507468 TSR2Q969E8 191 aaKnown RBP27.32■■□□□ 1.96
AFF1-206ENST00000507468 KDM3BQ7LBC6 1761 aa27.31■■□□□ 1.96
AFF1-206ENST00000507468 CCDC125Q86Z20 511 aa27.31■■□□□ 1.96
AFF1-206ENST00000507468 PTCD1O75127 700 aaKnown RBP27.3■■□□□ 1.96
AFF1-206ENST00000507468 SLFN5Q08AF3 891 aa27.3■■□□□ 1.96
AFF1-206ENST00000507468 UPF1Q92900 1129 aaKnown RBP eCLIP27.3■■□□□ 1.96
AFF1-206ENST00000507468 E9PSI1 815 aa27.29■■□□□ 1.96
AFF1-206ENST00000507468 PLSCR1O15162 318 aa27.29■■□□□ 1.96
AFF1-206ENST00000507468 SF3B2Q13435 895 aaKnown RBP27.29■■□□□ 1.96
AFF1-206ENST00000507468 ZNF496Q96IT1 587 aaPredicted RBP27.29■■□□□ 1.96
AFF1-206ENST00000507468 KCPQ6ZWJ8 1503 aa27.28■■□□□ 1.96
AFF1-206ENST00000507468 EIF4A1P60842 406 aaKnown RBP27.28■■□□□ 1.96
AFF1-206ENST00000507468 MYH16Q9H6N6 1097 aa27.28■■□□□ 1.96
AFF1-206ENST00000507468 FANCIQ9NVI1 1328 aa27.27■■□□□ 1.96
AFF1-206ENST00000507468 RBM42Q9BTD8 480 aaKnown RBP27.27■■□□□ 1.96
AFF1-206ENST00000507468 FMNL2Q96PY5 1086 aa27.26■■□□□ 1.95
AFF1-206ENST00000507468 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.95
AFF1-206ENST00000507468 UBR2Q8IWV8 1755 aa27.26■■□□□ 1.95
AFF1-206ENST00000507468 LOC102724428A0A0B4J2F2 783 aa27.25■■□□□ 1.95
AFF1-206ENST00000507468 SIK1P57059 783 aa27.25■■□□□ 1.95
AFF1-206ENST00000507468 TRMT2AQ8IZ69 625 aaKnown RBP27.25■■□□□ 1.95
AFF1-206ENST00000507468 KRT24Q2M2I5 525 aa27.24■■□□□ 1.95
AFF1-206ENST00000507468 DEFB132Q7Z7B7 95 aa27.24■■□□□ 1.95
AFF1-206ENST00000507468 HEG1Q9ULI3 1381 aa27.24■■□□□ 1.95
AFF1-206ENST00000507468 BAG6P46379 1132 aa27.23■■□□□ 1.95
AFF1-206ENST00000507468 EN1Q05925 392 aaPredicted RBP27.23■■□□□ 1.95
AFF1-206ENST00000507468 PROM2Q8N271 834 aa27.23■■□□□ 1.95
AFF1-206ENST00000507468 LY75O60449 1722 aa27.22■■□□□ 1.95
AFF1-206ENST00000507468 DUSP27Q5VZP5 1158 aa27.22■■□□□ 1.95
AFF1-206ENST00000507468 CAMKK2Q96RR4 588 aa27.22■■□□□ 1.95
AFF1-206ENST00000507468 KCNQ4P56696 695 aa27.21■■□□□ 1.95
AFF1-206ENST00000507468 TXNRD1Q16881 649 aa27.21■■□□□ 1.95
AFF1-206ENST00000507468 VSIG10Q8N0Z9 540 aa27.21■■□□□ 1.95
AFF1-206ENST00000507468 ATP6V1AP38606 617 aa27.2■■□□□ 1.95
AFF1-206ENST00000507468 CCNL1Q9UK58 526 aaPredicted RBP27.2■■□□□ 1.95
AFF1-206ENST00000507468 PRAMEF22A3QJZ6 481 aa27.19■■□□□ 1.94
AFF1-206ENST00000507468 GIGYF1O75420 1035 aaPredicted RBP27.19■■□□□ 1.94
AFF1-206ENST00000507468 EZH2Q15910 746 aaKnown RBP27.19■■□□□ 1.94
AFF1-206ENST00000507468 C8orf58Q8NAV2 365 aa27.19■■□□□ 1.94
AFF1-206ENST00000507468 LRRC4BQ9NT99 713 aa27.19■■□□□ 1.94
AFF1-206ENST00000507468 SNRPA1P09661 255 aaKnown RBP27.19■■□□□ 1.94
AFF1-206ENST00000507468 EXOSC9Q06265 439 aaKnown RBP27.19■■□□□ 1.94
AFF1-206ENST00000507468 ITPK1Q13572 414 aa27.19■■□□□ 1.94
AFF1-206ENST00000507468 SLC27A3Q5K4L6 730 aa27.19■■□□□ 1.94
AFF1-206ENST00000507468 RGPD3A6NKT7 1758 aaPredicted RBP27.18■■□□□ 1.94
AFF1-206ENST00000507468 RGPD4Q7Z3J3 1758 aa27.18■■□□□ 1.94
AFF1-206ENST00000507468 ELL2O00472 640 aaPredicted RBP27.17■■□□□ 1.94
AFF1-206ENST00000507468 DNAJC10Q8IXB1 793 aa27.17■■□□□ 1.94
AFF1-206ENST00000507468 TSPYL6Q8N831 410 aa27.17■■□□□ 1.94
AFF1-206ENST00000507468 USP16Q9Y5T5 823 aa27.16■■□□□ 1.94
AFF1-206ENST00000507468 ZNF831Q5JPB2 1677 aa27.15■■□□□ 1.94
AFF1-206ENST00000507468 TJP1Q07157 1748 aa27.13■■□□□ 1.93
AFF1-206ENST00000507468 TEX13AQ9BXU3 409 aaPredicted RBP27.13■■□□□ 1.93
AFF1-206ENST00000507468 HOXB7P09629 217 aa27.13■■□□□ 1.93
AFF1-206ENST00000507468 TWISTNBQ3B726 338 aaPredicted RBP27.13■■□□□ 1.93
AFF1-206ENST00000507468 LINC00116Q8NCU8 138 aa27.13■■□□□ 1.93
AFF1-206ENST00000507468 CICQ96RK0 1608 aaPredicted RBP27.12■■□□□ 1.93
AFF1-206ENST00000507468 C5P01031 1676 aa27.12■■□□□ 1.93
AFF1-206ENST00000507468 CYP19A1P11511 503 aaPredicted RBP27.12■■□□□ 1.93
AFF1-206ENST00000507468 SOS1Q07889 1333 aaPredicted RBP27.1■■□□□ 1.93
AFF1-206ENST00000507468 VAMP4O75379 141 aa27.1■■□□□ 1.93
AFF1-206ENST00000507468 STARD3NLO95772 234 aa27.09■■□□□ 1.93
AFF1-206ENST00000507468 EIF2S2P20042 333 aaKnown RBP27.09■■□□□ 1.93
AFF1-206ENST00000507468 TAF1LQ8IZX4 1826 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms