RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 CWC25Q9NXE8 425 aaPredicted RBP11.53□□□□□ -0.56
NEK1-203ENST00000507142 CAMSAP1Q5T5Y3 1602 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 SRGAP3O43295 1099 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 ATP2B2Q01814 1243 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 NYXQ9GZU5 481 aa11.53□□□□□ -0.56
NEK1-203ENST00000507142 CLTCQ00610 1675 aaKnown RBP11.52□□□□□ -0.56
NEK1-203ENST00000507142 GOLGA6L4A6NEF3 574 aa11.52□□□□□ -0.56
NEK1-203ENST00000507142 FSD1Q9BTV5 496 aa11.52□□□□□ -0.56
NEK1-203ENST00000507142 ERICH2A1L162 156 aa11.52□□□□□ -0.56
NEK1-203ENST00000507142 WDHD1O75717 1129 aaPredicted RBP11.52□□□□□ -0.57
NEK1-203ENST00000507142 IFIT1P09914 478 aaKnown RBP11.52□□□□□ -0.57
NEK1-203ENST00000507142 DNAAF4Q8WXU2 420 aa11.52□□□□□ -0.57
NEK1-203ENST00000507142 MAP3K2Q9Y2U5 619 aa11.52□□□□□ -0.57
NEK1-203ENST00000507142 ABCF2Q9UG63 623 aa11.52□□□□□ -0.57
NEK1-203ENST00000507142 SPATA31A3Q5VYP0 1347 aa11.52□□□□□ -0.57
NEK1-203ENST00000507142 ANKRD13DQ6ZTN6 518 aa11.51□□□□□ -0.57
NEK1-203ENST00000507142 EXOC6Q8TAG9 804 aa11.51□□□□□ -0.57
NEK1-203ENST00000507142 JDP2Q8WYK2 163 aa11.51□□□□□ -0.57
NEK1-203ENST00000507142 FKBP4Q02790 459 aaKnown RBP eCLIP11.51□□□□□ -0.57
NEK1-203ENST00000507142 FBXO41Q8TF61 875 aa11.51□□□□□ -0.57
NEK1-203ENST00000507142 XAGE3Q8WTP9 111 aa11.51□□□□□ -0.57
NEK1-203ENST00000507142 LRP2BPQ9P2M1 347 aa11.51□□□□□ -0.57
NEK1-203ENST00000507142 CT47B1P0C2W7 299 aaPredicted RBP11.51□□□□□ -0.57
NEK1-203ENST00000507142 NFXL1Q6ZNB6 911 aa11.51□□□□□ -0.57
NEK1-203ENST00000507142 UTP14AQ9BVJ6 771 aaKnown RBP11.51□□□□□ -0.57
NEK1-203ENST00000507142 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.51□□□□□ -0.573e-6■■□□□ 12.4
NEK1-203ENST00000507142 HTATSF1O43719 755 aaKnown RBP11.5□□□□□ -0.57
NEK1-203ENST00000507142 COPS6Q7L5N1 327 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 MAP3K5Q99683 1374 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
NEK1-203ENST00000507142 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
NEK1-203ENST00000507142 CCDC152Q4G0S7 254 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 JARID2Q92833 1246 aaPredicted RBP11.5□□□□□ -0.57
NEK1-203ENST00000507142 CARD10Q9BWT7 1032 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 SPATA31A6Q5VVP1 1343 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 F6X3S4 739 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
NEK1-203ENST00000507142 GLIPR1L2Q4G1C9 344 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 CNBD1Q8NA66 436 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 FLAD1Q8NFF5 587 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 ASXL1Q8IXJ9 1541 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 PLXNC1O60486 1568 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 BCAR3O75815 825 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 RASSF8Q8NHQ8 419 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 LNPKQ9C0E8 428 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 SPRYD3Q8NCJ5 442 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 CHPF2Q9P2E5 772 aa11.49□□□□□ -0.57
NEK1-203ENST00000507142 GCC2Q8IWJ2 1684 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 PTPRTO14522 1441 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 ZFYVE9O95405 1425 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 MBIPQ9NS73 344 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 FLIIQ13045 1269 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 ATF7IPQ6VMQ6 1270 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 UBE3BQ7Z3V4 1068 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 STK11IPQ8N1F8 1099 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 GJD4Q96KN9 370 aaPredicted RBP11.48□□□□□ -0.57
NEK1-203ENST00000507142 CDC42BPBQ9Y5S2 1711 aa11.48□□□□□ -0.57
NEK1-203ENST00000507142 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
NEK1-203ENST00000507142 RALYLQ86SE5 291 aaKnown RBP11.48□□□□□ -0.57
NEK1-203ENST00000507142 AACSQ86V21 672 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 ANKRD18AQ8IVF6 992 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 AKAP2Q9Y2D5 859 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 AGLP35573 1532 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 PI4KAP2A4QPH2 592 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 SLC5A1P13866 664 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 PI4KAP1Q8N8J0 262 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 TET3O43151 1660 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 BCS1LQ9Y276 419 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 H0YIN7 160 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 LDHAL6AQ6ZMR3 332 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 ARHGEF25Q86VW2 580 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 ANO2Q9NQ90 1003 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 ATF5Q9Y2D1 282 aaPredicted RBP11.47□□□□□ -0.57
NEK1-203ENST00000507142 WDR17Q8IZU2 1322 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 PRR36Q9H6K5 1346 aa11.47□□□□□ -0.57
NEK1-203ENST00000507142 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
NEK1-203ENST00000507142 DZIP1Q86YF9 867 aaKnown RBP11.46□□□□□ -0.57
NEK1-203ENST00000507142 RRP12Q5JTH9 1297 aaKnown RBP11.46□□□□□ -0.57
NEK1-203ENST00000507142 CPLX2Q6PUV4 134 aaKnown RBP11.46□□□□□ -0.57
NEK1-203ENST00000507142 ADGRB3O60242 1522 aa11.46□□□□□ -0.57
NEK1-203ENST00000507142 IDH1O75874 414 aaKnown RBP11.46□□□□□ -0.57
NEK1-203ENST00000507142 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
NEK1-203ENST00000507142 RNF20Q5VTR2 975 aa11.46□□□□□ -0.58
NEK1-203ENST00000507142 FANCIQ9NVI1 1328 aa11.46□□□□□ -0.58
NEK1-203ENST00000507142 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.58
NEK1-203ENST00000507142 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.58
NEK1-203ENST00000507142 THRAP3Q9Y2W1 955 aaKnown RBP11.46□□□□□ -0.58
NEK1-203ENST00000507142 CENPQQ7L2Z9 268 aaPredicted RBP11.45□□□□□ -0.58
NEK1-203ENST00000507142 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
NEK1-203ENST00000507142 MYO1BO43795 1136 aa11.45□□□□□ -0.58
NEK1-203ENST00000507142 RBM26Q5T8P6 1007 aaKnown RBP11.45□□□□□ -0.58
NEK1-203ENST00000507142 ZNF790Q6PG37 636 aa11.45□□□□□ -0.58
NEK1-203ENST00000507142 RBM17Q96I25 401 aaKnown RBP11.45□□□□□ -0.58
NEK1-203ENST00000507142 ABCA6Q8N139 1617 aa11.45□□□□□ -0.58
NEK1-203ENST00000507142 ZSCAN25Q6NSZ9 544 aa11.45□□□□□ -0.58
NEK1-203ENST00000507142 CRACR2BQ8N4Y2 399 aaPredicted RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms