RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 OTUD5Q96G74 571 aa8.14□□□□□ -1.11
GYPB-208ENST00000507009 COG3Q96JB2 828 aa8.14□□□□□ -1.11
GYPB-208ENST00000507009 MEGF6O75095 1541 aa8.13□□□□□ -1.11
GYPB-208ENST00000507009 NSD2O96028 1365 aa8.13□□□□□ -1.11
GYPB-208ENST00000507009 COL24A1Q17RW2 1714 aa8.13□□□□□ -1.11
GYPB-208ENST00000507009 PHF14O94880 888 aa8.13□□□□□ -1.11
GYPB-208ENST00000507009 SMIM5Q71RC9 77 aa8.13□□□□□ -1.11
GYPB-208ENST00000507009 GPBP1L1Q9HC44 474 aaPredicted RBP8.13□□□□□ -1.11
GYPB-208ENST00000507009 C5P01031 1676 aa8.13□□□□□ -1.11
GYPB-208ENST00000507009 C7P10643 843 aa8.12□□□□□ -1.11
GYPB-208ENST00000507009 RRS1Q15050 365 aaKnown RBP8.12□□□□□ -1.11
GYPB-208ENST00000507009 RAPGEF4Q8WZA2 1011 aa8.12□□□□□ -1.11
GYPB-208ENST00000507009 BMP2KQ9NSY1 1161 aaPredicted RBP8.12□□□□□ -1.11
GYPB-208ENST00000507009 TATP17735 454 aaPredicted RBP8.11□□□□□ -1.11
GYPB-208ENST00000507009 NBPF6Q5VWK0 638 aa8.11□□□□□ -1.11
GYPB-208ENST00000507009 MPRIPQ6WCQ1 1025 aa8.11□□□□□ -1.11
GYPB-208ENST00000507009 AK7Q96M32 723 aa8.11□□□□□ -1.11
GYPB-208ENST00000507009 NBPF4Q96M43 638 aa8.11□□□□□ -1.11
GYPB-208ENST00000507009 FBXO3Q9UK99 471 aa8.11□□□□□ -1.11
GYPB-208ENST00000507009 SMG6Q86US8 1419 aaKnown RBP8.11□□□□□ -1.11
GYPB-208ENST00000507009 GOLGB1Q14789 3259 aaKnown RBP8.11□□□□□ -1.11
GYPB-208ENST00000507009 TIE1P35590 1138 aa8.1□□□□□ -1.11
GYPB-208ENST00000507009 FAM212AQ96EL1 285 aa8.1□□□□□ -1.11
GYPB-208ENST00000507009 GGNBP2Q9H3C7 697 aa8.1□□□□□ -1.11
GYPB-208ENST00000507009 PALLDQ8WX93 1383 aa8.1□□□□□ -1.11
GYPB-208ENST00000507009 TAF1LQ8IZX4 1826 aa8.09□□□□□ -1.11
GYPB-208ENST00000507009 PCDHB13Q9Y5F0 798 aa8.09□□□□□ -1.11
GYPB-208ENST00000507009 TONSLQ96HA7 1378 aa8.09□□□□□ -1.12
GYPB-208ENST00000507009 IGSF1Q8N6C5 1336 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 CEP350Q5VT06 3117 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 ST20-MTHFSA0A0A6YYL1 179 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 PPM1GO15355 546 aaPredicted RBP8.08□□□□□ -1.12
GYPB-208ENST00000507009 HSPA6P17066 643 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 FLAD1Q8NFF5 587 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 CD2APQ9Y5K6 639 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 C4BP0C0L5 1744 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 ITGB4P16144 1822 aa8.08□□□□□ -1.12
GYPB-208ENST00000507009 PCDH11XQ9BZA7 1347 aa8.07□□□□□ -1.12
GYPB-208ENST00000507009 PCDH11YQ9BZA8 1340 aa8.07□□□□□ -1.12
GYPB-208ENST00000507009 TOGARAM1Q9Y4F4 1720 aa8.07□□□□□ -1.12
GYPB-208ENST00000507009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.07□□□□□ -1.12
GYPB-208ENST00000507009 HSP90AB2PQ58FF8 381 aa8.07□□□□□ -1.12
GYPB-208ENST00000507009 AMIGO3Q86WK7 504 aa8.07□□□□□ -1.12
GYPB-208ENST00000507009 RTL1A6NKG5 1358 aa8.07□□□□□ -1.12
GYPB-208ENST00000507009 KIF20BQ96Q89 1820 aa8.06□□□□□ -1.12
GYPB-208ENST00000507009 TTLL13PA6NNM8 815 aa8.06□□□□□ -1.12
GYPB-208ENST00000507009 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
GYPB-208ENST00000507009 CGNL1Q0VF96 1302 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 UBR3Q6ZT12 1888 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 FYB1O15117 783 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 GNPATO15228 680 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 CYP27B1O15528 508 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 POTEJP0CG39 1038 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 DCAF8Q5TAQ9 597 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 PIGBQ92521 554 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 TESK2Q96S53 571 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 ADCY9O60503 1353 aa8.05□□□□□ -1.12
GYPB-208ENST00000507009 N4BP2Q86UW6 1770 aaPredicted RBP8.05□□□□□ -1.12
GYPB-208ENST00000507009 IFNL1Q8IU54 200 aa8.04□□□□□ -1.12
GYPB-208ENST00000507009 LINC00116Q8NCU8 138 aa8.04□□□□□ -1.12
GYPB-208ENST00000507009 PUS7Q96PZ0 661 aaKnown RBP8.04□□□□□ -1.12
GYPB-208ENST00000507009 BCS1LQ9Y276 419 aa8.04□□□□□ -1.12
GYPB-208ENST00000507009 EMILIN1Q9Y6C2 1016 aa8.04□□□□□ -1.12
GYPB-208ENST00000507009 INSRP06213 1382 aa8.04□□□□□ -1.12
GYPB-208ENST00000507009 FLT4P35916 1363 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 LOC102724428A0A0B4J2F2 783 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 A0A0G2JLW4 131 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 POTEFA5A3E0 1075 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 KIF3CO14782 793 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 MMP10P09238 476 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 ATP6V1AP38606 617 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 SIK1P57059 783 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 ARHGAP27Q6ZUM4 889 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 TMOD3Q9NYL9 352 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 ASAP1Q9ULH1 1129 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 SPG7Q9UQ90 795 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 PKD1L3Q7Z443 1732 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
GYPB-208ENST00000507009 HMGB2P26583 209 aaKnown RBP8.02□□□□□ -1.13
GYPB-208ENST00000507009 SSFA2P28290 1259 aa8.02□□□□□ -1.13
GYPB-208ENST00000507009 VASPP50552 380 aaPredicted RBP8.02□□□□□ -1.13
GYPB-208ENST00000507009 TMF1P82094 1093 aa8.02□□□□□ -1.13
GYPB-208ENST00000507009 ITPK1Q13572 414 aa8.02□□□□□ -1.13
GYPB-208ENST00000507009 POLR3GLQ9BT43 218 aa8.02□□□□□ -1.13
GYPB-208ENST00000507009 CICQ96RK0 1608 aaPredicted RBP8.01□□□□□ -1.13
GYPB-208ENST00000507009 FCHSD2O94868 740 aa8.01□□□□□ -1.13
GYPB-208ENST00000507009 PYGBP11216 843 aa8.01□□□□□ -1.13
GYPB-208ENST00000507009 TNNT2P45379 298 aaPredicted RBP8.01□□□□□ -1.13
GYPB-208ENST00000507009 HTRA3P83110 453 aa8.01□□□□□ -1.13
GYPB-208ENST00000507009 MAMSTRQ6ZN01 415 aa8.01□□□□□ -1.13
GYPB-208ENST00000507009 C16orf71Q8IYS4 520 aaPredicted RBP8.01□□□□□ -1.13
GYPB-208ENST00000507009 NMRK2Q9NPI5 230 aa8.01□□□□□ -1.13
GYPB-208ENST00000507009 TRIM35Q9UPQ4 493 aa8.01□□□□□ -1.13
GYPB-208ENST00000507009 MAP2P11137 1827 aaKnown RBP8.01□□□□□ -1.13
GYPB-208ENST00000507009 PXDNLA1KZ92 1463 aa8□□□□□ -1.13
GYPB-208ENST00000507009 SEC24BO95487 1268 aa8□□□□□ -1.13
GYPB-208ENST00000507009 APLP1P51693 650 aa8□□□□□ -1.13
GYPB-208ENST00000507009 SLC24A1O60721 1099 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 PHKG2P15735 406 aa7.99□□□□□ -1.13
GYPB-208ENST00000507009 DPEP1P16444 411 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms