RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ATF5Q9Y2D1 282 aaPredicted RBP26.42■■□□□ 1.82
SNX25-204ENST00000506896 PNPLA7Q6ZV29 1317 aa26.41■■□□□ 1.82
SNX25-204ENST00000506896 C5P01031 1676 aa26.41■■□□□ 1.82
SNX25-204ENST00000506896 TFCP2L1Q9NZI6 479 aa26.41■■□□□ 1.82
SNX25-204ENST00000506896 HMGB2P26583 209 aaKnown RBP26.4■■□□□ 1.82
SNX25-204ENST00000506896 SGIP1Q9BQI5 828 aa26.4■■□□□ 1.82
SNX25-204ENST00000506896 ATG3Q9NT62 314 aa26.4■■□□□ 1.82
SNX25-204ENST00000506896 SLC16A10Q8TF71 515 aa26.39■■□□□ 1.82
SNX25-204ENST00000506896 PHACTR3Q96KR7 559 aa26.39■■□□□ 1.82
SNX25-204ENST00000506896 MAP3K5Q99683 1374 aa26.38■■□□□ 1.81
SNX25-204ENST00000506896 CABP4P57796 275 aa26.38■■□□□ 1.81
SNX25-204ENST00000506896 LOC102724428A0A0B4J2F2 783 aa26.37■■□□□ 1.81
SNX25-204ENST00000506896 GNAT3A8MTJ3 354 aa26.37■■□□□ 1.81
SNX25-204ENST00000506896 SIK1P57059 783 aa26.37■■□□□ 1.81
SNX25-204ENST00000506896 WDR43Q15061 677 aaKnown RBP eCLIP26.37■■□□□ 1.81
SNX25-204ENST00000506896 PPP1R1BQ9UD71 204 aaPredicted RBP26.37■■□□□ 1.81
SNX25-204ENST00000506896 SCN11AQ9UI33 1791 aa26.37■■□□□ 1.81
SNX25-204ENST00000506896 COL24A1Q17RW2 1714 aa26.36■■□□□ 1.81
SNX25-204ENST00000506896 PLEKHF1Q96S99 279 aa26.35■■□□□ 1.81
SNX25-204ENST00000506896 RNMTO43148 476 aaKnown RBP26.34■■□□□ 1.81
SNX25-204ENST00000506896 ADAMTS7Q9UKP4 1686 aa26.34■■□□□ 1.81
SNX25-204ENST00000506896 MAPK8IP3Q9UPT6 1336 aa26.34■■□□□ 1.81
SNX25-204ENST00000506896 C4BP0C0L5 1744 aa26.34■■□□□ 1.81
SNX25-204ENST00000506896 COL23A1Q86Y22 540 aaPredicted RBP26.33■■□□□ 1.81
SNX25-204ENST00000506896 VIRMAQ69YN4 1812 aaKnown RBP26.32■■□□□ 1.8
SNX25-204ENST00000506896 NFATC2IPQ8NCF5 419 aa26.32■■□□□ 1.8
SNX25-204ENST00000506896 LGR6Q9HBX8 967 aa26.32■■□□□ 1.8
SNX25-204ENST00000506896 MRC1P22897 1456 aa26.31■■□□□ 1.8
SNX25-204ENST00000506896 ITPK1Q13572 414 aa26.31■■□□□ 1.8
SNX25-204ENST00000506896 SLC4A9Q96Q91 983 aa26.31■■□□□ 1.8
SNX25-204ENST00000506896 SLC52A2Q9HAB3 445 aa26.31■■□□□ 1.8
SNX25-204ENST00000506896 ZNF831Q5JPB2 1677 aa26.31■■□□□ 1.8
SNX25-204ENST00000506896 HTATSF1O43719 755 aaKnown RBP26.3■■□□□ 1.8
SNX25-204ENST00000506896 ATP6V1AP38606 617 aa26.3■■□□□ 1.8
SNX25-204ENST00000506896 LINC00116Q8NCU8 138 aa26.3■■□□□ 1.8
SNX25-204ENST00000506896 RTF1Q92541 710 aaKnown RBP26.3■■□□□ 1.8
SNX25-204ENST00000506896 UBR3Q6ZT12 1888 aa26.3■■□□□ 1.8
SNX25-204ENST00000506896 FLAD1Q8NFF5 587 aa26.28■■□□□ 1.8
SNX25-204ENST00000506896 AMIGO3Q86WK7 504 aa26.27■■□□□ 1.8
SNX25-204ENST00000506896 IL17REQ8NFR9 667 aa26.27■■□□□ 1.8
SNX25-204ENST00000506896 ADAMTS8Q9UP79 889 aa26.27■■□□□ 1.8
SNX25-204ENST00000506896 CEMIPQ8WUJ3 1361 aa26.27■■□□□ 1.8
SNX25-204ENST00000506896 TEFQ10587 303 aa26.26■■□□□ 1.79
SNX25-204ENST00000506896 NFE2L2Q16236 605 aa26.26■■□□□ 1.79
SNX25-204ENST00000506896 AK7Q96M32 723 aa26.26■■□□□ 1.79
SNX25-204ENST00000506896 ARXQ96QS3 562 aa26.26■■□□□ 1.79
SNX25-204ENST00000506896 RBM42Q9BTD8 480 aaKnown RBP26.25■■□□□ 1.79
SNX25-204ENST00000506896 RUNDC1Q96C34 613 aa26.24■■□□□ 1.79
SNX25-204ENST00000506896 SYT17Q9BSW7 474 aa26.23■■□□□ 1.79
SNX25-204ENST00000506896 FHDC1Q9C0D6 1143 aaPredicted RBP26.23■■□□□ 1.79
SNX25-204ENST00000506896 MRS2Q9HD23 443 aa26.23■■□□□ 1.79
SNX25-204ENST00000506896 MSH5O43196 834 aa26.22■■□□□ 1.79
SNX25-204ENST00000506896 SMIM5Q71RC9 77 aa26.22■■□□□ 1.79
SNX25-204ENST00000506896 COL5A3P25940 1745 aaPredicted RBP26.22■■□□□ 1.79
SNX25-204ENST00000506896 SSFA2P28290 1259 aa26.21■■□□□ 1.79
SNX25-204ENST00000506896 CCDC184Q52MB2 194 aa26.21■■□□□ 1.79
SNX25-204ENST00000506896 RC3H1Q5TC82 1133 aaKnown RBP26.21■■□□□ 1.79
SNX25-204ENST00000506896 MYH14Q7Z406 1995 aaKnown RBP26.2■■□□□ 1.79
SNX25-204ENST00000506896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.2■■□□□ 1.78
SNX25-204ENST00000506896 PTCD1O75127 700 aaKnown RBP26.2■■□□□ 1.78
SNX25-204ENST00000506896 POLD1P28340 1107 aa26.2■■□□□ 1.78
SNX25-204ENST00000506896 MCM10Q7L590 875 aa26.19■■□□□ 1.78
SNX25-204ENST00000506896 CCDC146Q8IYE0 955 aa26.19■■□□□ 1.78
SNX25-204ENST00000506896 DLG5Q8TDM6 1919 aa26.19■■□□□ 1.78
SNX25-204ENST00000506896 SIPA1L3O60292 1781 aaPredicted RBP26.18■■□□□ 1.78
SNX25-204ENST00000506896 LMOD3Q0VAK6 560 aa26.18■■□□□ 1.78
SNX25-204ENST00000506896 CICQ96RK0 1608 aaPredicted RBP26.17■■□□□ 1.78
SNX25-204ENST00000506896 GNPATO15228 680 aa26.17■■□□□ 1.78
SNX25-204ENST00000506896 TMPOP42166 694 aaKnown RBP26.17■■□□□ 1.78
SNX25-204ENST00000506896 PNISRQ8TF01 805 aaKnown RBP26.17■■□□□ 1.78
SNX25-204ENST00000506896 CNTNAP4Q9C0A0 1308 aa26.16■■□□□ 1.78
SNX25-204ENST00000506896 PHF14O94880 888 aa26.16■■□□□ 1.78
SNX25-204ENST00000506896 RIPK4P57078 832 aa26.16■■□□□ 1.78
SNX25-204ENST00000506896 TTC5Q8N0Z6 440 aa26.16■■□□□ 1.78
SNX25-204ENST00000506896 TJP1Q07157 1748 aa26.15■■□□□ 1.78
SNX25-204ENST00000506896 SLC39A6Q13433 755 aa26.15■■□□□ 1.78
SNX25-204ENST00000506896 DCTN1Q14203 1278 aa26.15■■□□□ 1.78
SNX25-204ENST00000506896 MSL1Q68DK7 614 aa26.15■■□□□ 1.78
SNX25-204ENST00000506896 BTBD11A6QL63 1104 aa26.14■■□□□ 1.78
SNX25-204ENST00000506896 RPS6KA4O75676 772 aa26.13■■□□□ 1.77
SNX25-204ENST00000506896 ZNF790Q6PG37 636 aa26.13■■□□□ 1.77
SNX25-204ENST00000506896 RTCBQ9Y3I0 505 aaKnown RBP26.13■■□□□ 1.77
SNX25-204ENST00000506896 TAF7Q15545 349 aaPredicted RBP26.12■■□□□ 1.77
SNX25-204ENST00000506896 VSIG10Q8N0Z9 540 aa26.12■■□□□ 1.77
SNX25-204ENST00000506896 KCPQ6ZWJ8 1503 aa26.12■■□□□ 1.77
SNX25-204ENST00000506896 UBR2Q8IWV8 1755 aa26.11■■□□□ 1.77
SNX25-204ENST00000506896 TRAPPC3LQ5T215 181 aa26.11■■□□□ 1.77
SNX25-204ENST00000506896 ADRA2BP18089 450 aa26.09■■□□□ 1.77
SNX25-204ENST00000506896 CRKLP46109 303 aaKnown RBP26.09■■□□□ 1.77
SNX25-204ENST00000506896 ARHGEF1Q92888 912 aaKnown RBP26.09■■□□□ 1.77
SNX25-204ENST00000506896 RRP7AQ9Y3A4 280 aaKnown RBP26.09■■□□□ 1.77
SNX25-204ENST00000506896 UTRNP46939 3433 aa26.09■■□□□ 1.77
SNX25-204ENST00000506896 NEUROD2Q15784 382 aa26.08■■□□□ 1.77
SNX25-204ENST00000506896 INTS5Q6P9B9 1019 aaKnown RBP26.08■■□□□ 1.77
SNX25-204ENST00000506896 DNAJC10Q8IXB1 793 aa26.08■■□□□ 1.77
SNX25-204ENST00000506896 FMNL2Q96PY5 1086 aa26.08■■□□□ 1.77
SNX25-204ENST00000506896 DCAF8L1A6NGE4 600 aa26.07■■□□□ 1.76
SNX25-204ENST00000506896 APAF1O14727 1248 aa26.07■■□□□ 1.76
SNX25-204ENST00000506896 DIEXFQ68CQ4 756 aaKnown RBP26.06■■□□□ 1.76
SNX25-204ENST00000506896 ZNF496Q96IT1 587 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms