RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLC52A2Q9HAB3 445 aa11.13□□□□□ -0.63
PDGFC-205ENST00000506880 RREB1Q92766 1687 aa11.13□□□□□ -0.63
PDGFC-205ENST00000506880 PAPPAQ13219 1627 aa11.13□□□□□ -0.63
PDGFC-205ENST00000506880 SOS1Q07889 1333 aaPredicted RBP11.12□□□□□ -0.63
PDGFC-205ENST00000506880 TMPOP42166 694 aaKnown RBP11.12□□□□□ -0.63
PDGFC-205ENST00000506880 TEFQ10587 303 aa11.12□□□□□ -0.63
PDGFC-205ENST00000506880 VSIG10Q8N0Z9 540 aa11.12□□□□□ -0.63
PDGFC-205ENST00000506880 UBR2Q8IWV8 1755 aa11.12□□□□□ -0.63
PDGFC-205ENST00000506880 QSER1Q2KHR3 1735 aa11.12□□□□□ -0.63
PDGFC-205ENST00000506880 IL16Q14005 1332 aa11.11□□□□□ -0.63
PDGFC-205ENST00000506880 TRIM37O94972 964 aa11.11□□□□□ -0.63
PDGFC-205ENST00000506880 CABP4P57796 275 aa11.11□□□□□ -0.63
PDGFC-205ENST00000506880 PHACTR3Q96KR7 559 aa11.11□□□□□ -0.63
PDGFC-205ENST00000506880 TEX13AQ9BXU3 409 aaPredicted RBP11.11□□□□□ -0.63
PDGFC-205ENST00000506880 RNF216Q9NWF9 866 aaPredicted RBP11.11□□□□□ -0.63
PDGFC-205ENST00000506880 CACNA1FO60840 1977 aa11.1□□□□□ -0.63
PDGFC-205ENST00000506880 PRIM1P49642 420 aaKnown RBP11.1□□□□□ -0.63
PDGFC-205ENST00000506880 APBA3O96018 575 aa11.09□□□□□ -0.63
PDGFC-205ENST00000506880 TAF7Q15545 349 aaPredicted RBP11.09□□□□□ -0.63
PDGFC-205ENST00000506880 CAMKK2Q96RR4 588 aa11.09□□□□□ -0.63
PDGFC-205ENST00000506880 TAF1LQ8IZX4 1826 aa11.09□□□□□ -0.63
PDGFC-205ENST00000506880 C5P01031 1676 aa11.08□□□□□ -0.64
PDGFC-205ENST00000506880 RIPK4P57078 832 aa11.08□□□□□ -0.64
PDGFC-205ENST00000506880 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
PDGFC-205ENST00000506880 IL17REQ8NFR9 667 aa11.08□□□□□ -0.64
PDGFC-205ENST00000506880 PIGBQ92521 554 aa11.08□□□□□ -0.64
PDGFC-205ENST00000506880 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
PDGFC-205ENST00000506880 PALLDQ8WX93 1383 aa11.07□□□□□ -0.64
PDGFC-205ENST00000506880 HOXB7P09629 217 aa11.07□□□□□ -0.64
PDGFC-205ENST00000506880 RC3H1Q5TC82 1133 aaKnown RBP11.07□□□□□ -0.64
PDGFC-205ENST00000506880 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
PDGFC-205ENST00000506880 TTC5Q8N0Z6 440 aa11.07□□□□□ -0.64
PDGFC-205ENST00000506880 FLAD1Q8NFF5 587 aa11.07□□□□□ -0.64
PDGFC-205ENST00000506880 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 RGL2O15211 777 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 GNAI1P63096 354 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 ZNF790Q6PG37 636 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 NFATC2IPQ8NCF5 419 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 SYTL4Q96C24 671 aaPredicted RBP11.06□□□□□ -0.64
PDGFC-205ENST00000506880 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 IFT57Q9NWB7 429 aa11.06□□□□□ -0.64
PDGFC-205ENST00000506880 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
PDGFC-205ENST00000506880 APAF1O14727 1248 aa11.05□□□□□ -0.64
PDGFC-205ENST00000506880 KCNQ2O43526 872 aa11.05□□□□□ -0.64
PDGFC-205ENST00000506880 COL5A3P25940 1745 aaPredicted RBP11.05□□□□□ -0.64
PDGFC-205ENST00000506880 SIK1P57059 783 aa11.05□□□□□ -0.64
PDGFC-205ENST00000506880 TXNRD1Q16881 649 aa11.05□□□□□ -0.64
PDGFC-205ENST00000506880 FMNL2Q96PY5 1086 aa11.05□□□□□ -0.64
PDGFC-205ENST00000506880 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
PDGFC-205ENST00000506880 BTBD11A6QL63 1104 aa11.04□□□□□ -0.64
PDGFC-205ENST00000506880 ACSBG1Q96GR2 724 aa11.04□□□□□ -0.64
PDGFC-205ENST00000506880 LGR6Q9HBX8 967 aa11.04□□□□□ -0.64
PDGFC-205ENST00000506880 ATG3Q9NT62 314 aa11.04□□□□□ -0.64
PDGFC-205ENST00000506880 CNTNAP4Q9C0A0 1308 aa11.04□□□□□ -0.64
PDGFC-205ENST00000506880 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
PDGFC-205ENST00000506880 HEG1Q9ULI3 1381 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 LAMB4A4D0S4 1761 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 CHL1O00533 1208 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 STARD3NLO95772 234 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 MIER1Q8N108 512 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
PDGFC-205ENST00000506880 SNRPA1P09661 255 aaKnown RBP11.02□□□□□ -0.65
PDGFC-205ENST00000506880 ZNF853P0CG23 659 aa11.02□□□□□ -0.65
PDGFC-205ENST00000506880 WWC1Q8IX03 1113 aa11.02□□□□□ -0.65
PDGFC-205ENST00000506880 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.65
PDGFC-205ENST00000506880 SLC16A10Q8TF71 515 aa11.02□□□□□ -0.65
PDGFC-205ENST00000506880 ZNF428Q96B54 188 aa11.02□□□□□ -0.65
PDGFC-205ENST00000506880 RNF39Q9H2S5 420 aa11.02□□□□□ -0.65
PDGFC-205ENST00000506880 CCNL1Q9UK58 526 aaPredicted RBP11.02□□□□□ -0.65
PDGFC-205ENST00000506880 C4BP0C0L5 1744 aa11.01□□□□□ -0.65
PDGFC-205ENST00000506880 CT47B1P0C2W7 299 aaPredicted RBP11.01□□□□□ -0.65
PDGFC-205ENST00000506880 EN1Q05925 392 aaPredicted RBP11.01□□□□□ -0.65
PDGFC-205ENST00000506880 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
PDGFC-205ENST00000506880 MYH16Q9H6N6 1097 aa11.01□□□□□ -0.65
PDGFC-205ENST00000506880 ASAP1Q9ULH1 1129 aa11.01□□□□□ -0.65
PDGFC-205ENST00000506880 UBR3Q6ZT12 1888 aa11.01□□□□□ -0.65
PDGFC-205ENST00000506880 SSFA2P28290 1259 aa11□□□□□ -0.65
PDGFC-205ENST00000506880 MCM10Q7L590 875 aa11□□□□□ -0.65
PDGFC-205ENST00000506880 STK32BQ9NY57 414 aa11□□□□□ -0.65
PDGFC-205ENST00000506880 ZNF521Q96K83 1311 aa11□□□□□ -0.65
PDGFC-205ENST00000506880 TJP1Q07157 1748 aa11□□□□□ -0.65
PDGFC-205ENST00000506880 E9PSI1 815 aa10.99□□□□□ -0.65
PDGFC-205ENST00000506880 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
PDGFC-205ENST00000506880 EZH2Q15910 746 aaKnown RBP10.99□□□□□ -0.65
PDGFC-205ENST00000506880 PROM2Q8N271 834 aa10.99□□□□□ -0.65
PDGFC-205ENST00000506880 TSPYL4Q9UJ04 414 aa10.99□□□□□ -0.65
PDGFC-205ENST00000506880 COL24A1Q17RW2 1714 aa10.98□□□□□ -0.65
PDGFC-205ENST00000506880 MYH14Q7Z406 1995 aaKnown RBP10.98□□□□□ -0.65
PDGFC-205ENST00000506880 A0A087WZG4 1122 aa10.98□□□□□ -0.65
PDGFC-205ENST00000506880 EIF4A1P60842 406 aaKnown RBP10.98□□□□□ -0.65
PDGFC-205ENST00000506880 SLC15A2Q16348 729 aa10.98□□□□□ -0.65
PDGFC-205ENST00000506880 DEFB132Q7Z7B7 95 aa10.98□□□□□ -0.65
PDGFC-205ENST00000506880 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
PDGFC-205ENST00000506880 GIGYF1O75420 1035 aaPredicted RBP10.97□□□□□ -0.65
PDGFC-205ENST00000506880 GOLGA2Q08379 1002 aa10.97□□□□□ -0.65
PDGFC-205ENST00000506880 ZNF496Q96IT1 587 aaPredicted RBP10.97□□□□□ -0.65
PDGFC-205ENST00000506880 ZBED9Q6R2W3 1325 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms