RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 GAS2L2Q8NHY3 880 aa10.54□□□□□ -0.72
HERC4-213ENST00000506515 AGBL1Q96MI9 1066 aa10.54□□□□□ -0.72
HERC4-213ENST00000506515 CXXC1Q9P0U4 656 aaPredicted RBP10.54□□□□□ -0.72
HERC4-213ENST00000506515 Q6ZVU0 165 aa10.53□□□□□ -0.72
HERC4-213ENST00000506515 HPS1Q92902 700 aa10.53□□□□□ -0.72
HERC4-213ENST00000506515 IL2RAP01589 272 aa10.52□□□□□ -0.73
HERC4-213ENST00000506515 ARID4AP29374 1257 aaPredicted RBP10.52□□□□□ -0.73
HERC4-213ENST00000506515 RELBQ01201 579 aa10.52□□□□□ -0.73
HERC4-213ENST00000506515 KDF1Q8NAX2 398 aaPredicted RBP10.52□□□□□ -0.73
HERC4-213ENST00000506515 CCER1Q8TC90 406 aaPredicted RBP10.52□□□□□ -0.73
HERC4-213ENST00000506515 A0A1W2PRU2 124 aa10.51□□□□□ -0.73
HERC4-213ENST00000506515 WEE1P30291 646 aa10.51□□□□□ -0.73
HERC4-213ENST00000506515 TXNDC2Q86VQ3 553 aa10.51□□□□□ -0.73
HERC4-213ENST00000506515 CNKSR1Q969H4 720 aa10.51□□□□□ -0.73
HERC4-213ENST00000506515 MEN1O00255 615 aa10.5□□□□□ -0.73
HERC4-213ENST00000506515 PTGIRP43119 386 aa10.5□□□□□ -0.73
HERC4-213ENST00000506515 SCG3Q8WXD2 468 aaKnown RBP10.5□□□□□ -0.73
HERC4-213ENST00000506515 XAGE2Q96GT9 111 aa10.5□□□□□ -0.73
HERC4-213ENST00000506515 SLC4A9Q96Q91 983 aa10.5□□□□□ -0.73
HERC4-213ENST00000506515 MKNK1Q9BUB5 465 aa10.5□□□□□ -0.73
HERC4-213ENST00000506515 TSPAN10Q9H1Z9 355 aaPredicted RBP10.5□□□□□ -0.73
HERC4-213ENST00000506515 ZNF395Q9H8N7 513 aaPredicted RBP10.5□□□□□ -0.73
HERC4-213ENST00000506515 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
HERC4-213ENST00000506515 GNEQ9Y223 722 aaKnown RBP10.5□□□□□ -0.73
HERC4-213ENST00000506515 A6NJY4 79 aa10.49□□□□□ -0.73
HERC4-213ENST00000506515 SMTNP53814 917 aa10.49□□□□□ -0.73
HERC4-213ENST00000506515 EPHA4P54764 986 aa10.49□□□□□ -0.73
HERC4-213ENST00000506515 TBCELQ5QJ74 424 aa10.49□□□□□ -0.73
HERC4-213ENST00000506515 C1orf216Q8TAB5 229 aa10.49□□□□□ -0.73
HERC4-213ENST00000506515 CHMP7Q8WUX9 453 aaPredicted RBP10.49□□□□□ -0.73
HERC4-213ENST00000506515 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
HERC4-213ENST00000506515 ESYT1Q9BSJ8 1104 aa10.49□□□□□ -0.73
HERC4-213ENST00000506515 FKBP5Q13451 457 aaPredicted RBP10.48□□□□□ -0.73
HERC4-213ENST00000506515 TLR1Q15399 786 aa10.48□□□□□ -0.73
HERC4-213ENST00000506515 TMCO4Q5TGY1 634 aa10.48□□□□□ -0.73
HERC4-213ENST00000506515 ATAD2Q6PL18 1390 aa10.48□□□□□ -0.73
HERC4-213ENST00000506515 IGFBP4P22692 258 aa10.47□□□□□ -0.73
HERC4-213ENST00000506515 SERPINB4P48594 390 aa10.47□□□□□ -0.73
HERC4-213ENST00000506515 CLN3Q13286 438 aa10.47□□□□□ -0.73
HERC4-213ENST00000506515 TAS1R3Q7RTX0 852 aa10.47□□□□□ -0.73
HERC4-213ENST00000506515 NLRP3Q96P20 1036 aa10.47□□□□□ -0.73
HERC4-213ENST00000506515 CCDC9Q9Y3X0 531 aaKnown RBP10.47□□□□□ -0.73
HERC4-213ENST00000506515 CAPN5O15484 640 aaPredicted RBP10.46□□□□□ -0.73
HERC4-213ENST00000506515 SLC9A9Q8IVB4 645 aa10.46□□□□□ -0.73
HERC4-213ENST00000506515 MEIOBQ8N635 442 aa10.46□□□□□ -0.73
HERC4-213ENST00000506515 SCHIP1Q9P0W5 487 aaPredicted RBP10.46□□□□□ -0.73
HERC4-213ENST00000506515 MTMR7Q9Y216 660 aa10.46□□□□□ -0.73
HERC4-213ENST00000506515 C21orf2O43822 256 aa10.45□□□□□ -0.74
HERC4-213ENST00000506515 PPP1R12BO60237 982 aaPredicted RBP10.45□□□□□ -0.74
HERC4-213ENST00000506515 RGS20O76081 388 aa10.45□□□□□ -0.74
HERC4-213ENST00000506515 CENPCQ03188 943 aa10.45□□□□□ -0.74
HERC4-213ENST00000506515 MTFR1Q15390 333 aa10.45□□□□□ -0.74
HERC4-213ENST00000506515 CAPN12Q6ZSI9 719 aa10.45□□□□□ -0.74
HERC4-213ENST00000506515 HRH3Q9Y5N1 445 aa10.45□□□□□ -0.74
HERC4-213ENST00000506515 FAM187AA6NFU0 413 aa10.44□□□□□ -0.74
HERC4-213ENST00000506515 ABL1P00519 1130 aa10.44□□□□□ -0.74
HERC4-213ENST00000506515 FOXK2Q01167 660 aa10.44□□□□□ -0.74
HERC4-213ENST00000506515 SEPT3Q9UH03 358 aa10.44□□□□□ -0.74
HERC4-213ENST00000506515 USP3Q9Y6I4 520 aa10.44□□□□□ -0.74
HERC4-213ENST00000506515 FOXO3O43524 673 aa10.43□□□□□ -0.74
HERC4-213ENST00000506515 NAA30Q147X3 362 aaPredicted RBP10.43□□□□□ -0.74
HERC4-213ENST00000506515 VTI1AQ96AJ9 217 aa10.43□□□□□ -0.74
HERC4-213ENST00000506515 TSEN34Q9BSV6 310 aaKnown RBP10.43□□□□□ -0.74
HERC4-213ENST00000506515 CDK2AP1O14519 115 aa10.42□□□□□ -0.74
HERC4-213ENST00000506515 PTCD1O75127 700 aaKnown RBP10.42□□□□□ -0.74
HERC4-213ENST00000506515 SND1Q7KZF4 910 aaKnown RBP eCLIP10.42□□□□□ -0.74
HERC4-213ENST00000506515 ANO2Q9NQ90 1003 aa10.42□□□□□ -0.74
HERC4-213ENST00000506515 UPP2O95045 317 aa10.41□□□□□ -0.74
HERC4-213ENST00000506515 LINC00528Q8N1L1 170 aa10.41□□□□□ -0.74
HERC4-213ENST00000506515 ZSCAN10Q96SZ4 725 aaPredicted RBP10.41□□□□□ -0.74
HERC4-213ENST00000506515 INSM2Q96T92 566 aaPredicted RBP10.41□□□□□ -0.74
HERC4-213ENST00000506515 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
HERC4-213ENST00000506515 IQSEC3Q9UPP2 1182 aaPredicted RBP10.41□□□□□ -0.74
HERC4-213ENST00000506515 MFAP1P55081 439 aaKnown RBP10.4□□□□□ -0.74
HERC4-213ENST00000506515 PSMA6P60900 246 aaKnown RBP10.4□□□□□ -0.74
HERC4-213ENST00000506515 ZNF211Q13398 564 aaPredicted RBP10.4□□□□□ -0.74
HERC4-213ENST00000506515 SLC27A3Q5K4L6 730 aa10.4□□□□□ -0.74
HERC4-213ENST00000506515 TMEM214Q6NUQ4 689 aaKnown RBP10.4□□□□□ -0.74
HERC4-213ENST00000506515 GTF3C2Q8WUA4 911 aaPredicted RBP10.4□□□□□ -0.74
HERC4-213ENST00000506515 POLMQ9NP87 494 aaPredicted RBP10.4□□□□□ -0.74
HERC4-213ENST00000506515 CABP1Q9NZU7 370 aa10.4□□□□□ -0.74
HERC4-213ENST00000506515 CHMP3Q9Y3E7 222 aa10.4□□□□□ -0.74
HERC4-213ENST00000506515 SOWAHDA6NJG2 315 aa10.39□□□□□ -0.75
HERC4-213ENST00000506515 GTF2E1P29083 439 aaPredicted RBP10.39□□□□□ -0.75
HERC4-213ENST00000506515 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
HERC4-213ENST00000506515 NBPF15Q8N660 670 aa10.39□□□□□ -0.75
HERC4-213ENST00000506515 C2orf49Q9BVC5 232 aaPredicted RBP10.39□□□□□ -0.75
HERC4-213ENST00000506515 BMP2P12643 396 aa10.38□□□□□ -0.75
HERC4-213ENST00000506515 COL26A1Q96A83 441 aa10.38□□□□□ -0.75
HERC4-213ENST00000506515 ZNF232Q9UNY5 417 aa10.38□□□□□ -0.75
HERC4-213ENST00000506515 PARP3Q9Y6F1 533 aa10.38□□□□□ -0.75
HERC4-213ENST00000506515 SPINT1O43278 529 aa10.37□□□□□ -0.75
HERC4-213ENST00000506515 CTSOP43234 321 aaPredicted RBP10.37□□□□□ -0.75
HERC4-213ENST00000506515 MTMR3Q13615 1198 aa10.37□□□□□ -0.75
HERC4-213ENST00000506515 CCDC27Q2M243 656 aa10.37□□□□□ -0.75
HERC4-213ENST00000506515 PPARGC1BQ86YN6 1023 aaKnown RBP10.37□□□□□ -0.75
HERC4-213ENST00000506515 BIN2Q9UBW5 565 aaPredicted RBP10.37□□□□□ -0.75
HERC4-213ENST00000506515 DNMT3AQ9Y6K1 912 aaPredicted RBP10.37□□□□□ -0.75
HERC4-213ENST00000506515 SERTM1A2A2V5 107 aa10.36□□□□□ -0.75
HERC4-213ENST00000506515 H3BRB1 525 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms