RNA–Protein interactions for RNA: ENST00000505331.1

CPNE4-204, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-204ENST00000505331 WNK3Q9BYP7 1800 aa6.37□□□□□ -1.39
CPNE4-204ENST00000505331 KDM6AO15550 1401 aaPredicted RBP6.37□□□□□ -1.39
CPNE4-204ENST00000505331 NLRP2Q9NX02 1062 aa6.37□□□□□ -1.39
CPNE4-204ENST00000505331 TRAK1Q9UPV9 953 aa6.37□□□□□ -1.39
CPNE4-204ENST00000505331 SLIT3O75094 1523 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 SPDYE2BA6NHP3 402 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 SPDYE6P0CI01 402 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 ECE1P42892 770 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 SPDYE2Q495Y8 402 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 AMIGO3Q86WK7 504 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 LDHDQ86WU2 507 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 GPR101Q96P66 508 aaPredicted RBP6.36□□□□□ -1.39
CPNE4-204ENST00000505331 TSKSQ9UJT2 592 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 PKD1L3Q7Z443 1732 aa6.36□□□□□ -1.39
CPNE4-204ENST00000505331 ITGBL1O95965 494 aaPredicted RBP6.35□□□□□ -1.39
CPNE4-204ENST00000505331 POTEIP0CG38 1075 aa6.35□□□□□ -1.39
CPNE4-204ENST00000505331 POTEJP0CG39 1038 aa6.35□□□□□ -1.39
CPNE4-204ENST00000505331 RASSF7Q02833 373 aa6.35□□□□□ -1.39
CPNE4-204ENST00000505331 EVX2Q03828 476 aa6.35□□□□□ -1.39
CPNE4-204ENST00000505331 NLGN1Q8N2Q7 840 aa6.35□□□□□ -1.39
CPNE4-204ENST00000505331 CDK19Q9BWU1 502 aa6.35□□□□□ -1.39
CPNE4-204ENST00000505331 ABT1Q9ULW3 272 aaKnown RBP6.35□□□□□ -1.39
CPNE4-204ENST00000505331 MAP2K2P36507 400 aa6.34□□□□□ -1.39
CPNE4-204ENST00000505331 CAPNS2Q96L46 248 aa6.34□□□□□ -1.39
CPNE4-204ENST00000505331 IQCA1LA6NCM1 817 aa6.33□□□□□ -1.4
CPNE4-204ENST00000505331 MNX1P50219 401 aaPredicted RBP6.33□□□□□ -1.4
CPNE4-204ENST00000505331 TMF1P82094 1093 aa6.33□□□□□ -1.4
CPNE4-204ENST00000505331 PARP3Q9Y6F1 533 aa6.33□□□□□ -1.4
CPNE4-204ENST00000505331 USP54Q70EL1 1684 aa6.33□□□□□ -1.4
CPNE4-204ENST00000505331 QRICH2Q9H0J4 1663 aa6.33□□□□□ -1.4
CPNE4-204ENST00000505331 PALLDQ8WX93 1383 aa6.32□□□□□ -1.4
CPNE4-204ENST00000505331 PAXIP1Q6ZW49 1069 aaPredicted RBP6.32□□□□□ -1.4
CPNE4-204ENST00000505331 LY75O60449 1722 aa6.32□□□□□ -1.4
CPNE4-204ENST00000505331 KIAA1551Q9HCM1 1747 aa6.31□□□□□ -1.4
CPNE4-204ENST00000505331 PDE4DIPQ5VU43 2346 aa6.31□□□□□ -1.4
CPNE4-204ENST00000505331 GNPATO15228 680 aa6.31□□□□□ -1.4
CPNE4-204ENST00000505331 SOX12O15370 315 aa6.31□□□□□ -1.4
CPNE4-204ENST00000505331 BRPF1P55201 1214 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-204ENST00000505331 MKRN4PQ13434 485 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-204ENST00000505331 CYP4F22Q6NT55 531 aa6.31□□□□□ -1.4
CPNE4-204ENST00000505331 SMARCC1Q92922 1105 aaPredicted RBP6.31□□□□□ -1.4
CPNE4-204ENST00000505331 VIRMAQ69YN4 1812 aaKnown RBP6.31□□□□□ -1.4
CPNE4-204ENST00000505331 ITSN1Q15811 1721 aa6.3□□□□□ -1.4
CPNE4-204ENST00000505331 GRM1Q13255 1194 aa6.3□□□□□ -1.4
CPNE4-204ENST00000505331 CNTROBQ8N137 903 aa6.3□□□□□ -1.4
CPNE4-204ENST00000505331 ANKRD24Q8TF21 1146 aa6.3□□□□□ -1.4
CPNE4-204ENST00000505331 TAF1DQ9H5J8 278 aaPredicted RBP6.3□□□□□ -1.4
CPNE4-204ENST00000505331 ADGRB1O14514 1584 aa6.3□□□□□ -1.4
CPNE4-204ENST00000505331 THSD7BQ9C0I4 1608 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 DDNO94850 711 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-204ENST00000505331 CHRNA5P30532 468 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 ITGAEP38570 1179 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 NBPF1Q3BBV0 1214 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 ERFEQ4G0M1 354 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 TRAPPC3LQ5T215 181 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 SPDYE1Q8NFV5 336 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-204ENST00000505331 ZCRB1Q8TBF4 217 aaKnown RBP6.29□□□□□ -1.4
CPNE4-204ENST00000505331 CLEC11AQ9Y240 323 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 KIF13BQ9NQT8 1826 aa6.29□□□□□ -1.4
CPNE4-204ENST00000505331 C4BP0C0L5 1744 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 NFKBIEO00221 500 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 AOC2O75106 756 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 PRKAR2AP13861 404 aaKnown RBP6.28□□□□□ -1.4
CPNE4-204ENST00000505331 EAPPQ56P03 285 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-204ENST00000505331 PNMA8AQ86V59 439 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-204ENST00000505331 MPNDQ8N594 471 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 LINC00116Q8NCU8 138 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 L3MBTL3Q96JM7 780 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-204ENST00000505331 DDX21Q9NR30 783 aaKnown RBP eCLIP6.28□□□□□ -1.4
CPNE4-204ENST00000505331 SSUH2Q9Y2M2 353 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 C5P01031 1676 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 N4BP2Q86UW6 1770 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-204ENST00000505331 LTBP1Q14766 1721 aa6.28□□□□□ -1.4
CPNE4-204ENST00000505331 ADAMTS7Q9UKP4 1686 aa6.27□□□□□ -1.41
CPNE4-204ENST00000505331 GYS1P13807 737 aa6.27□□□□□ -1.41
CPNE4-204ENST00000505331 MAP1SQ66K74 1059 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-204ENST00000505331 MPRIPQ6WCQ1 1025 aa6.27□□□□□ -1.41
CPNE4-204ENST00000505331 HPS5Q9UPZ3 1129 aa6.27□□□□□ -1.41
CPNE4-204ENST00000505331 RTCBQ9Y3I0 505 aaKnown RBP6.27□□□□□ -1.41
CPNE4-204ENST00000505331 TOGARAM1Q9Y4F4 1720 aa6.26□□□□□ -1.41
CPNE4-204ENST00000505331 LOC102724428A0A0B4J2F2 783 aa6.26□□□□□ -1.41
CPNE4-204ENST00000505331 SIK1P57059 783 aa6.26□□□□□ -1.41
CPNE4-204ENST00000505331 SRPK2P78362 688 aaKnown RBP6.26□□□□□ -1.41
CPNE4-204ENST00000505331 CTU1Q7Z7A3 348 aaKnown RBP6.26□□□□□ -1.41
CPNE4-204ENST00000505331 TTLL6Q8N841 843 aa6.26□□□□□ -1.41
CPNE4-204ENST00000505331 ZNF692Q9BU19 519 aaPredicted RBP6.26□□□□□ -1.41
CPNE4-204ENST00000505331 CABP1Q9NZU7 370 aa6.26□□□□□ -1.41
CPNE4-204ENST00000505331 COLQQ9Y215 455 aaPredicted RBP6.26□□□□□ -1.41
CPNE4-204ENST00000505331 TLL2Q9Y6L7 1015 aa6.26□□□□□ -1.41
CPNE4-204ENST00000505331 ARFGEF1Q9Y6D6 1849 aa6.26□□□□□ -1.41
CPNE4-204ENST00000505331 TTC21BQ7Z4L5 1316 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 MEGF6O75095 1541 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 NFAT5O94916 1531 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 EPHX2P34913 555 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 RFC4P35249 363 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 PKN2Q16513 984 aaKnown RBP6.25□□□□□ -1.41
CPNE4-204ENST00000505331 CIAPIN1Q6FI81 312 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 ARHGEF1Q92888 912 aaKnown RBP6.25□□□□□ -1.41
CPNE4-204ENST00000505331 HHIPL1Q96JK4 782 aa6.25□□□□□ -1.41
CPNE4-204ENST00000505331 CABP2Q9NPB3 220 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms