RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RIMS1Q86UR5 1692 aaKnown RBP14.51□□□□□ -0.09
UBE3D-206ENST00000505226 FOXD4L6Q3SYB3 417 aaPredicted RBP14.51□□□□□ -0.09
UBE3D-206ENST00000505226 FOXD4L3Q6VB84 417 aaPredicted RBP14.51□□□□□ -0.09
UBE3D-206ENST00000505226 HMMRO75330 724 aa14.5□□□□□ -0.09
UBE3D-206ENST00000505226 HAP1P54257 671 aaPredicted RBP14.5□□□□□ -0.09
UBE3D-206ENST00000505226 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
UBE3D-206ENST00000505226 RGPD1P0DJD0 1748 aa14.5□□□□□ -0.09
UBE3D-206ENST00000505226 CHMLP26374 656 aa14.5□□□□□ -0.09
UBE3D-206ENST00000505226 MLECQ14165 292 aa14.5□□□□□ -0.09
UBE3D-206ENST00000505226 GDPD2Q9HCC8 539 aa14.5□□□□□ -0.09
UBE3D-206ENST00000505226 ZKSCAN5Q9Y2L8 839 aa14.5□□□□□ -0.09
UBE3D-206ENST00000505226 ITSN1Q15811 1721 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 SPATA31D1Q6ZQQ2 1576 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 GADD45BO75293 160 aaPredicted RBP14.49□□□□□ -0.09
UBE3D-206ENST00000505226 AEBP2Q6ZN18 517 aaPredicted RBP14.49□□□□□ -0.09
UBE3D-206ENST00000505226 UPF3BQ9BZI7 483 aaKnown RBP14.49□□□□□ -0.09
UBE3D-206ENST00000505226 PDCL3Q9H2J4 239 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 OVOS2A0A0J9YW53 1432 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 OVOS2Q6IE36 1432 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 ACEP12821 1306 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 GNAI2P04899 355 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 MX1P20591 662 aa14.49□□□□□ -0.09
UBE3D-206ENST00000505226 CCT4P50991 539 aaKnown RBP14.48□□□□□ -0.09
UBE3D-206ENST00000505226 RILPL2Q969X0 211 aa14.48□□□□□ -0.09
UBE3D-206ENST00000505226 ANO2Q9NQ90 1003 aa14.48□□□□□ -0.09
UBE3D-206ENST00000505226 ROBO2Q9HCK4 1378 aa14.48□□□□□ -0.09
UBE3D-206ENST00000505226 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
UBE3D-206ENST00000505226 LRRCC1Q9C099 1032 aa14.48□□□□□ -0.09
UBE3D-206ENST00000505226 TERF1P54274 439 aa14.47□□□□□ -0.09
UBE3D-206ENST00000505226 TRIM6-TRIM34B2RNG4 842 aa14.46□□□□□ -0.09
UBE3D-206ENST00000505226 TECPR2O15040 1411 aa14.46□□□□□ -0.09
UBE3D-206ENST00000505226 MBD3O95983 291 aa14.46□□□□□ -0.1
UBE3D-206ENST00000505226 ATP8B2P98198 1209 aa14.45□□□□□ -0.1
UBE3D-206ENST00000505226 INTS4Q96HW7 963 aaKnown RBP14.45□□□□□ -0.1
UBE3D-206ENST00000505226 MCM2P49736 904 aa14.45□□□□□ -0.1
UBE3D-206ENST00000505226 FLIIQ13045 1269 aa14.45□□□□□ -0.1
UBE3D-206ENST00000505226 SIRT1Q96EB6 747 aa14.45□□□□□ -0.1
UBE3D-206ENST00000505226 USP48Q86UV5 1035 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 MPNDQ8N594 471 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 STAP2Q9UGK3 403 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 LRRFIP2Q9Y608 721 aaKnown RBP14.44□□□□□ -0.1
UBE3D-206ENST00000505226 TCHHQ07283 1943 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 IL17RAQ96F46 866 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 PKNOX2Q96KN3 472 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 IL1RAPL2Q9NP60 686 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 FAM13BQ9NYF5 915 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.44□□□□□ -0.1
UBE3D-206ENST00000505226 USP31Q70CQ4 1352 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 UQCRHLA0A096LP55 91 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 UQCRHP07919 91 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 ANAPC15P60006 121 aa14.44□□□□□ -0.1
UBE3D-206ENST00000505226 FKBP5Q13451 457 aaPredicted RBP14.44□□□□□ -0.1
UBE3D-206ENST00000505226 MAP4K4O95819 1239 aaPredicted RBP14.43□□□□□ -0.1
UBE3D-206ENST00000505226 TSPY26PQ9H489 355 aa14.43□□□□□ -0.1
UBE3D-206ENST00000505226 USP6P35125 1406 aa14.43□□□□□ -0.1
UBE3D-206ENST00000505226 RTF1Q92541 710 aaKnown RBP14.43□□□□□ -0.1
UBE3D-206ENST00000505226 LARP6Q9BRS8 491 aaKnown RBP14.43□□□□□ -0.1
UBE3D-206ENST00000505226 CCDC39Q9UFE4 941 aa14.43□□□□□ -0.1
UBE3D-206ENST00000505226 CEP170BQ9Y4F5 1589 aaPredicted RBP14.43□□□□□ -0.1
UBE3D-206ENST00000505226 NALCNQ8IZF0 1738 aa14.43□□□□□ -0.1
UBE3D-206ENST00000505226 XRN1Q8IZH2 1706 aaKnown RBP14.43□□□□□ -0.1
UBE3D-206ENST00000505226 DTNBO60941 627 aa14.42□□□□□ -0.1
UBE3D-206ENST00000505226 NUTM1Q86Y26 1132 aa14.42□□□□□ -0.1
UBE3D-206ENST00000505226 EYA1Q99502 592 aa14.42□□□□□ -0.1
UBE3D-206ENST00000505226 USP44Q9H0E7 712 aa14.42□□□□□ -0.1
UBE3D-206ENST00000505226 PLEKHG3A1L390 1219 aa14.42□□□□□ -0.1
UBE3D-206ENST00000505226 RPAP1Q9BWH6 1393 aaPredicted RBP14.42□□□□□ -0.1
UBE3D-206ENST00000505226 ARHGEF10O15013 1369 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 MCCP23508 829 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 MCM5P33992 734 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 PLPPR3Q6T4P5 718 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 PPP6R1Q9UPN7 881 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBE3D-206ENST00000505226 AGLP35573 1532 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 HSPA4P34932 840 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 STK31Q9BXU1 1019 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 SRCIN1Q9C0H9 1055 aa14.41□□□□□ -0.1
UBE3D-206ENST00000505226 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
UBE3D-206ENST00000505226 GNAI3P08754 354 aa14.4□□□□□ -0.1
UBE3D-206ENST00000505226 TPRNQ4KMQ1 711 aa14.4□□□□□ -0.1
UBE3D-206ENST00000505226 JARID2Q92833 1246 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-206ENST00000505226 ZNF830Q96NB3 372 aaPredicted RBP14.4□□□□□ -0.1
UBE3D-206ENST00000505226 KDRP35968 1356 aa14.4□□□□□ -0.1
UBE3D-206ENST00000505226 SSH2Q76I76 1423 aa14.4□□□□□ -0.1
UBE3D-206ENST00000505226 TOPAZ1Q8N9V7 1692 aa14.39□□□□□ -0.11
UBE3D-206ENST00000505226 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
UBE3D-206ENST00000505226 FAM69CQ0P6D2 419 aa14.39□□□□□ -0.11
UBE3D-206ENST00000505226 RASEFQ8IZ41 740 aa14.39□□□□□ -0.11
UBE3D-206ENST00000505226 CNPY2Q9Y2B0 182 aa14.39□□□□□ -0.11
UBE3D-206ENST00000505226 FAM208AQ9UK61 1670 aaKnown RBP14.39□□□□□ -0.11
UBE3D-206ENST00000505226 PI4K2BQ8TCG2 481 aa14.39□□□□□ -0.11
UBE3D-206ENST00000505226 IGSF1Q8N6C5 1336 aa14.38□□□□□ -0.11
UBE3D-206ENST00000505226 CCDC30Q5VVM6 783 aa14.38□□□□□ -0.11
UBE3D-206ENST00000505226 IL17REQ8NFR9 667 aa14.38□□□□□ -0.11
UBE3D-206ENST00000505226 PHAXQ9H814 394 aaKnown RBP14.38□□□□□ -0.11
UBE3D-206ENST00000505226 CSPP1Q1MSJ5 1256 aa14.38□□□□□ -0.11
UBE3D-206ENST00000505226 TTC14Q96N46 770 aa14.38□□□□□ -0.11
UBE3D-206ENST00000505226 SNX14Q9Y5W7 946 aa14.38□□□□□ -0.11
UBE3D-206ENST00000505226 ADAMTS13Q76LX8 1427 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms