RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 LY75O60449 1722 aa13.46□□□□□ -0.25
RFC1-210ENST00000505077 ERVV-2B6SEH9 535 aa13.44□□□□□ -0.26
RFC1-210ENST00000505077 KRT27Q7Z3Y8 459 aa13.44□□□□□ -0.26
RFC1-210ENST00000505077 MARCH10Q8NA82 808 aaPredicted RBP13.44□□□□□ -0.26
RFC1-210ENST00000505077 DDX54Q8TDD1 881 aaKnown RBP13.44□□□□□ -0.26
RFC1-210ENST00000505077 TRIM35Q9UPQ4 493 aa13.44□□□□□ -0.26
RFC1-210ENST00000505077 RRP7AQ9Y3A4 280 aaKnown RBP13.44□□□□□ -0.26
RFC1-210ENST00000505077 IL16Q14005 1332 aa13.43□□□□□ -0.26
RFC1-210ENST00000505077 ZNF521Q96K83 1311 aa13.43□□□□□ -0.26
RFC1-210ENST00000505077 NEUROD2Q15784 382 aa13.43□□□□□ -0.26
RFC1-210ENST00000505077 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
RFC1-210ENST00000505077 WWC1Q8IX03 1113 aa13.43□□□□□ -0.26
RFC1-210ENST00000505077 RNMTO43148 476 aaKnown RBP13.42□□□□□ -0.26
RFC1-210ENST00000505077 MPRIPQ6WCQ1 1025 aa13.42□□□□□ -0.26
RFC1-210ENST00000505077 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
RFC1-210ENST00000505077 TAF1LQ8IZX4 1826 aa13.41□□□□□ -0.26
RFC1-210ENST00000505077 TEFQ10587 303 aa13.41□□□□□ -0.26
RFC1-210ENST00000505077 FAM196AQ6ZSG2 479 aa13.41□□□□□ -0.26
RFC1-210ENST00000505077 COL5A3P25940 1745 aaPredicted RBP13.4□□□□□ -0.26
RFC1-210ENST00000505077 MCM10Q7L590 875 aa13.4□□□□□ -0.26
RFC1-210ENST00000505077 IL17REQ8NFR9 667 aa13.4□□□□□ -0.26
RFC1-210ENST00000505077 SLC52A2Q9HAB3 445 aa13.4□□□□□ -0.26
RFC1-210ENST00000505077 IFT57Q9NWB7 429 aa13.4□□□□□ -0.26
RFC1-210ENST00000505077 CABP4P57796 275 aa13.39□□□□□ -0.27
RFC1-210ENST00000505077 GNAI1P63096 354 aa13.39□□□□□ -0.27
RFC1-210ENST00000505077 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
RFC1-210ENST00000505077 C5P01031 1676 aa13.39□□□□□ -0.27
RFC1-210ENST00000505077 GOLGA2Q08379 1002 aa13.38□□□□□ -0.27
RFC1-210ENST00000505077 TAF7Q15545 349 aaPredicted RBP13.38□□□□□ -0.27
RFC1-210ENST00000505077 CFAP44Q96MT7 982 aa13.38□□□□□ -0.27
RFC1-210ENST00000505077 LGR6Q9HBX8 967 aa13.38□□□□□ -0.27
RFC1-210ENST00000505077 TJP1Q07157 1748 aa13.38□□□□□ -0.27
RFC1-210ENST00000505077 E9PSI1 815 aa13.37□□□□□ -0.27
RFC1-210ENST00000505077 DCTN1Q14203 1278 aa13.37□□□□□ -0.27
RFC1-210ENST00000505077 MYH16Q9H6N6 1097 aa13.37□□□□□ -0.27
RFC1-210ENST00000505077 KCPQ6ZWJ8 1503 aa13.37□□□□□ -0.27
RFC1-210ENST00000505077 THUMPD2Q9BTF0 503 aaKnown RBP13.36□□□□□ -0.27
RFC1-210ENST00000505077 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
RFC1-210ENST00000505077 RREB1Q92766 1687 aa13.36□□□□□ -0.27
RFC1-210ENST00000505077 CHL1O00533 1208 aa13.35□□□□□ -0.27
RFC1-210ENST00000505077 ZNF853P0CG23 659 aa13.35□□□□□ -0.27
RFC1-210ENST00000505077 NFATC2IPQ8NCF5 419 aa13.35□□□□□ -0.27
RFC1-210ENST00000505077 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
RFC1-210ENST00000505077 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
RFC1-210ENST00000505077 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
RFC1-210ENST00000505077 PRIM1P49642 420 aaKnown RBP13.34□□□□□ -0.27
RFC1-210ENST00000505077 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
RFC1-210ENST00000505077 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
RFC1-210ENST00000505077 PIGBQ92521 554 aa13.33□□□□□ -0.28
RFC1-210ENST00000505077 SMARCC1Q92922 1105 aaPredicted RBP13.33□□□□□ -0.28
RFC1-210ENST00000505077 SYTL4Q96C24 671 aaPredicted RBP13.33□□□□□ -0.28
RFC1-210ENST00000505077 TSPYL4Q9UJ04 414 aa13.33□□□□□ -0.28
RFC1-210ENST00000505077 FANCIQ9NVI1 1328 aa13.33□□□□□ -0.28
RFC1-210ENST00000505077 SENP3-EIF4A1A0A087X0R7 540 aa13.32□□□□□ -0.28
RFC1-210ENST00000505077 SLFN5Q08AF3 891 aa13.32□□□□□ -0.28
RFC1-210ENST00000505077 ZNF790Q6PG37 636 aa13.32□□□□□ -0.28
RFC1-210ENST00000505077 QSER1Q2KHR3 1735 aa13.31□□□□□ -0.28
RFC1-210ENST00000505077 HMGB2P26583 209 aaKnown RBP13.31□□□□□ -0.28
RFC1-210ENST00000505077 FAM182BQ5T319 152 aa13.31□□□□□ -0.28
RFC1-210ENST00000505077 TRMT2AQ8IZ69 625 aaKnown RBP13.31□□□□□ -0.28
RFC1-210ENST00000505077 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
RFC1-210ENST00000505077 MBIPQ9NS73 344 aa13.31□□□□□ -0.28
RFC1-210ENST00000505077 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
RFC1-210ENST00000505077 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
RFC1-210ENST00000505077 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
RFC1-210ENST00000505077 NUP188Q5SRE5 1749 aa13.3□□□□□ -0.28
RFC1-210ENST00000505077 HOXB7P09629 217 aa13.3□□□□□ -0.28
RFC1-210ENST00000505077 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
RFC1-210ENST00000505077 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
RFC1-210ENST00000505077 CHMP4AQ9BY43 222 aa13.3□□□□□ -0.28
RFC1-210ENST00000505077 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
RFC1-210ENST00000505077 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
RFC1-210ENST00000505077 KCNQ2O43526 872 aa13.29□□□□□ -0.28
RFC1-210ENST00000505077 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
RFC1-210ENST00000505077 CCDC125Q86Z20 511 aa13.29□□□□□ -0.28
RFC1-210ENST00000505077 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
RFC1-210ENST00000505077 C4BP0C0L5 1744 aa13.29□□□□□ -0.28
RFC1-210ENST00000505077 N4BP2Q86UW6 1770 aaPredicted RBP13.29□□□□□ -0.28
RFC1-210ENST00000505077 TUBGCP6Q96RT7 1819 aa13.28□□□□□ -0.28
RFC1-210ENST00000505077 TRIM37O94972 964 aa13.28□□□□□ -0.28
RFC1-210ENST00000505077 ZNF428Q96B54 188 aa13.28□□□□□ -0.28
RFC1-210ENST00000505077 SPINK5Q9NQ38 1064 aaPredicted RBP13.28□□□□□ -0.28
RFC1-210ENST00000505077 ATG3Q9NT62 314 aa13.28□□□□□ -0.28
RFC1-210ENST00000505077 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
RFC1-210ENST00000505077 TSR2Q969E8 191 aaKnown RBP13.27□□□□□ -0.29
RFC1-210ENST00000505077 CDCA7LQ96GN5 454 aa13.27□□□□□ -0.29
RFC1-210ENST00000505077 MIS18AQ9NYP9 233 aa13.27□□□□□ -0.29
RFC1-210ENST00000505077 ASAP1Q9ULH1 1129 aa13.27□□□□□ -0.29
RFC1-210ENST00000505077 PLSCR1O15162 318 aa13.26□□□□□ -0.29
RFC1-210ENST00000505077 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
RFC1-210ENST00000505077 ZNF496Q96IT1 587 aaPredicted RBP13.26□□□□□ -0.29
RFC1-210ENST00000505077 TEX13AQ9BXU3 409 aaPredicted RBP13.26□□□□□ -0.29
RFC1-210ENST00000505077 C4AP0C0L4 1744 aa13.25□□□□□ -0.29
RFC1-210ENST00000505077 SNRPA1P09661 255 aaKnown RBP13.25□□□□□ -0.29
RFC1-210ENST00000505077 SF3B2Q13435 895 aaKnown RBP13.25□□□□□ -0.29
RFC1-210ENST00000505077 SLC27A3Q5K4L6 730 aa13.25□□□□□ -0.29
RFC1-210ENST00000505077 ANKRD36CQ5JPF3 1778 aa13.25□□□□□ -0.29
RFC1-210ENST00000505077 BCORQ6W2J9 1755 aa13.25□□□□□ -0.29
RFC1-210ENST00000505077 LOC102724428A0A0B4J2F2 783 aa13.24□□□□□ -0.29
RFC1-210ENST00000505077 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms