RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 MAP3K5Q99683 1374 aa27.45■■□□□ 1.98
DDR1-255ENST00000504927 PLEKHF1Q96S99 279 aa27.44■■□□□ 1.98
DDR1-255ENST00000504927 LOC102724428A0A0B4J2F2 783 aa27.43■■□□□ 1.98
DDR1-255ENST00000504927 SIK1P57059 783 aa27.43■■□□□ 1.98
DDR1-255ENST00000504927 ZNF827Q17R98 1081 aa27.43■■□□□ 1.98
DDR1-255ENST00000504927 HTATSF1O43719 755 aaKnown RBP27.42■■□□□ 1.98
DDR1-255ENST00000504927 AKT1S1Q96B36 256 aa27.42■■□□□ 1.98
DDR1-255ENST00000504927 WDR43Q15061 677 aaKnown RBP eCLIP27.41■■□□□ 1.98
DDR1-255ENST00000504927 IL17REQ8NFR9 667 aa27.41■■□□□ 1.98
DDR1-255ENST00000504927 RTF1Q92541 710 aaKnown RBP27.41■■□□□ 1.98
DDR1-255ENST00000504927 ATP6V1AP38606 617 aa27.39■■□□□ 1.98
DDR1-255ENST00000504927 MAPK8IP3Q9UPT6 1336 aa27.39■■□□□ 1.97
DDR1-255ENST00000504927 TEFQ10587 303 aa27.38■■□□□ 1.97
DDR1-255ENST00000504927 TFCP2L1Q9NZI6 479 aa27.38■■□□□ 1.97
DDR1-255ENST00000504927 TUBGCP6Q96RT7 1819 aa27.38■■□□□ 1.97
DDR1-255ENST00000504927 SCN11AQ9UI33 1791 aa27.37■■□□□ 1.97
DDR1-255ENST00000504927 RBM42Q9BTD8 480 aaKnown RBP27.37■■□□□ 1.97
DDR1-255ENST00000504927 C5P01031 1676 aa27.36■■□□□ 1.97
DDR1-255ENST00000504927 CEMIPQ8WUJ3 1361 aa27.35■■□□□ 1.97
DDR1-255ENST00000504927 NFE2L2Q16236 605 aa27.35■■□□□ 1.97
DDR1-255ENST00000504927 ADAMTS7Q9UKP4 1686 aa27.34■■□□□ 1.97
DDR1-255ENST00000504927 MRC1P22897 1456 aa27.34■■□□□ 1.97
DDR1-255ENST00000504927 ADAMTS8Q9UP79 889 aa27.34■■□□□ 1.97
DDR1-255ENST00000504927 TAF1LQ8IZX4 1826 aa27.33■■□□□ 1.97
DDR1-255ENST00000504927 PTCD1O75127 700 aaKnown RBP27.33■■□□□ 1.97
DDR1-255ENST00000504927 QSER1Q2KHR3 1735 aa27.31■■□□□ 1.96
DDR1-255ENST00000504927 ZBTB7AO95365 584 aa27.31■■□□□ 1.96
DDR1-255ENST00000504927 ITPK1Q13572 414 aa27.31■■□□□ 1.96
DDR1-255ENST00000504927 RUNDC1Q96C34 613 aa27.31■■□□□ 1.96
DDR1-255ENST00000504927 MCM10Q7L590 875 aa27.3■■□□□ 1.96
DDR1-255ENST00000504927 LINC00116Q8NCU8 138 aa27.3■■□□□ 1.96
DDR1-255ENST00000504927 FLAD1Q8NFF5 587 aa27.3■■□□□ 1.96
DDR1-255ENST00000504927 AK7Q96M32 723 aa27.3■■□□□ 1.96
DDR1-255ENST00000504927 SLC4A9Q96Q91 983 aa27.3■■□□□ 1.96
DDR1-255ENST00000504927 SPON1Q9HCB6 807 aa27.3■■□□□ 1.96
DDR1-255ENST00000504927 SLC39A6Q13433 755 aa27.29■■□□□ 1.96
DDR1-255ENST00000504927 TTC5Q8N0Z6 440 aa27.29■■□□□ 1.96
DDR1-255ENST00000504927 SLC16A10Q8TF71 515 aa27.29■■□□□ 1.96
DDR1-255ENST00000504927 VIRMAQ69YN4 1812 aaKnown RBP27.27■■□□□ 1.96
DDR1-255ENST00000504927 PNPLA7Q6ZV29 1317 aa27.27■■□□□ 1.96
DDR1-255ENST00000504927 BTBD11A6QL63 1104 aa27.27■■□□□ 1.96
DDR1-255ENST00000504927 RC3H1Q5TC82 1133 aaKnown RBP27.27■■□□□ 1.96
DDR1-255ENST00000504927 ZNF790Q6PG37 636 aa27.27■■□□□ 1.96
DDR1-255ENST00000504927 VSIG10Q8N0Z9 540 aa27.27■■□□□ 1.96
DDR1-255ENST00000504927 RIPK4P57078 832 aa27.26■■□□□ 1.95
DDR1-255ENST00000504927 DCTN1Q14203 1278 aa27.26■■□□□ 1.95
DDR1-255ENST00000504927 MTFR1LQ9H019 292 aa27.26■■□□□ 1.95
DDR1-255ENST00000504927 C4BP0C0L5 1744 aa27.26■■□□□ 1.95
DDR1-255ENST00000504927 TMPOP42166 694 aaKnown RBP27.25■■□□□ 1.95
DDR1-255ENST00000504927 LMOD3Q0VAK6 560 aa27.25■■□□□ 1.95
DDR1-255ENST00000504927 CCDC146Q8IYE0 955 aa27.25■■□□□ 1.95
DDR1-255ENST00000504927 ATF5Q9Y2D1 282 aaPredicted RBP27.25■■□□□ 1.95
DDR1-255ENST00000504927 ZNF831Q5JPB2 1677 aa27.24■■□□□ 1.95
DDR1-255ENST00000504927 TAF7Q15545 349 aaPredicted RBP27.24■■□□□ 1.95
DDR1-255ENST00000504927 SSFA2P28290 1259 aa27.23■■□□□ 1.95
DDR1-255ENST00000504927 PTGER2P43116 358 aa27.23■■□□□ 1.95
DDR1-255ENST00000504927 CCDC184Q52MB2 194 aa27.23■■□□□ 1.95
DDR1-255ENST00000504927 MRS2Q9HD23 443 aa27.23■■□□□ 1.95
DDR1-255ENST00000504927 CNTNAP4Q9C0A0 1308 aa27.22■■□□□ 1.95
DDR1-255ENST00000504927 COL23A1Q86Y22 540 aaPredicted RBP27.22■■□□□ 1.95
DDR1-255ENST00000504927 PNISRQ8TF01 805 aaKnown RBP27.22■■□□□ 1.95
DDR1-255ENST00000504927 GNPATO15228 680 aa27.21■■□□□ 1.95
DDR1-255ENST00000504927 MSH5O43196 834 aa27.21■■□□□ 1.95
DDR1-255ENST00000504927 AMIGO3Q86WK7 504 aa27.21■■□□□ 1.95
DDR1-255ENST00000504927 TEX13AQ9BXU3 409 aaPredicted RBP27.21■■□□□ 1.95
DDR1-255ENST00000504927 FMNL2Q96PY5 1086 aa27.2■■□□□ 1.94
DDR1-255ENST00000504927 RTCBQ9Y3I0 505 aaKnown RBP27.2■■□□□ 1.94
DDR1-255ENST00000504927 ZNF496Q96IT1 587 aaPredicted RBP27.19■■□□□ 1.94
DDR1-255ENST00000504927 SGIP1Q9BQI5 828 aa27.19■■□□□ 1.94
DDR1-255ENST00000504927 UBR3Q6ZT12 1888 aa27.19■■□□□ 1.94
DDR1-255ENST00000504927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.18■■□□□ 1.94
DDR1-255ENST00000504927 RPS6KA4O75676 772 aa27.18■■□□□ 1.94
DDR1-255ENST00000504927 SMIM5Q71RC9 77 aa27.18■■□□□ 1.94
DDR1-255ENST00000504927 DNAJC10Q8IXB1 793 aa27.18■■□□□ 1.94
DDR1-255ENST00000504927 ADRA2BP18089 450 aa27.17■■□□□ 1.94
DDR1-255ENST00000504927 CRKLP46109 303 aaKnown RBP27.17■■□□□ 1.94
DDR1-255ENST00000504927 NEUROD2Q15784 382 aa27.17■■□□□ 1.94
DDR1-255ENST00000504927 TRAPPC3LQ5T215 181 aa27.17■■□□□ 1.94
DDR1-255ENST00000504927 KCPQ6ZWJ8 1503 aa27.16■■□□□ 1.94
DDR1-255ENST00000504927 COL5A3P25940 1745 aaPredicted RBP27.16■■□□□ 1.94
DDR1-255ENST00000504927 STARD3NLO95772 234 aa27.16■■□□□ 1.94
DDR1-255ENST00000504927 RRP7AQ9Y3A4 280 aaKnown RBP27.16■■□□□ 1.94
DDR1-255ENST00000504927 COL24A1Q17RW2 1714 aa27.16■■□□□ 1.94
DDR1-255ENST00000504927 SIPA1L3O60292 1781 aaPredicted RBP27.15■■□□□ 1.94
DDR1-255ENST00000504927 HEG1Q9ULI3 1381 aa27.15■■□□□ 1.94
DDR1-255ENST00000504927 PHF14O94880 888 aa27.15■■□□□ 1.94
DDR1-255ENST00000504927 CYP19A1P11511 503 aaPredicted RBP27.15■■□□□ 1.94
DDR1-255ENST00000504927 KCNQ3O43525 872 aa27.14■■□□□ 1.94
DDR1-255ENST00000504927 THUMPD2Q9BTF0 503 aaKnown RBP27.14■■□□□ 1.94
DDR1-255ENST00000504927 CCDC87Q9NVE4 849 aa27.14■■□□□ 1.94
DDR1-255ENST00000504927 BABAM1Q9NWV8 329 aa27.14■■□□□ 1.94
DDR1-255ENST00000504927 PPP1R1BQ9UD71 204 aaPredicted RBP27.14■■□□□ 1.94
DDR1-255ENST00000504927 INTS5Q6P9B9 1019 aaKnown RBP27.13■■□□□ 1.93
DDR1-255ENST00000504927 TJP1Q07157 1748 aa27.13■■□□□ 1.93
DDR1-255ENST00000504927 APAF1O14727 1248 aa27.12■■□□□ 1.93
DDR1-255ENST00000504927 POLD1P28340 1107 aa27.12■■□□□ 1.93
DDR1-255ENST00000504927 MIS18AQ9NYP9 233 aa27.12■■□□□ 1.93
DDR1-255ENST00000504927 TRIM35Q9UPQ4 493 aa27.12■■□□□ 1.93
DDR1-255ENST00000504927 CICQ96RK0 1608 aaPredicted RBP27.12■■□□□ 1.93
DDR1-255ENST00000504927 DLG5Q8TDM6 1919 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms